We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MYL6 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1007.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3320.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2887.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
2637.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2425.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
2306.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2184.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
2173.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
2169.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2124.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
2042.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2037.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
1978.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1949.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
1940.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
1904.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1846.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1808.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
1804.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
1759.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1749.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
1740.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
1730.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1729.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1727.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
1715.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1698.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
1676.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
1665.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
1646.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1637.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
1602.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1598.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1576.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1567.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
1536.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
1511.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
1508.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1495.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
1482.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
1471.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
1470.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1468.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
1468.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1461.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
1449.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
1446.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1425.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
1424.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
1395.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1390.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
1388.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1369.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1367.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
1364.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
1357.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1355.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1344.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
1335.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1324.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1323.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1323.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
1321.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
1305.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1301.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1298.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1295.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1295.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1288.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
1277.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1271.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1265.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1264.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1261.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1260.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
1258.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1256.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1256.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
1255.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
1245.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1240.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
1221.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
1213.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
1212.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1206.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1203.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1186.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
1178.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1176.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1171.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
1154.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1151.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1150.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
1146.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1138.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
1135.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1132.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
1127.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1126.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1124.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
1124.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
1120.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1115.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
1115.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1109.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
1108.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1107.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
1107.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1105.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1102.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1100.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
1094.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
1093.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
1083.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1082.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1082.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1077.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
1077.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
1077.2
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
1077.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1075.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1074.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
1074.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
1071.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1068.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1063.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1061.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1059.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
1056.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1048.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1042.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1039.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
1038.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1037.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
1036.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1029.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
1025.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
1023.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
1021.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1010.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
1009.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
1001.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1001.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1000.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
995.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
993.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
990.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
986.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
985.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
981.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
980.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
978.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
976.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
975.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
970.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
965.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
963.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
963.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
962.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
961.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
954.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
954.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
954.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
954.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
953.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
953.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
953.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
949.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
947.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
947.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
947.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
940.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
940.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
936.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
936.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
933.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
932.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
930.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
927.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
926.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
923.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
920.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
919.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
915.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
914.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
914.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
908.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
906.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
905.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
904.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
901.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
898.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
898.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
896.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
892.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
890.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
890.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
890.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
886.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
885.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
883.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
883.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
882.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
879.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
878.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
877.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
877.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
876.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
876.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
872.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
872.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
868.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
868.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
861.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
860.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
859.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
857.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
856.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
856.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
854.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
854.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
849.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
848.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
847.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
846.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
836.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
834.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
830.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
828.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
819.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
818.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
815.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
812.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
808.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
808.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
806.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
806.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
806.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
806.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
803.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
799.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
796.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
793.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
786.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
785.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
784.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
781.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
781.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
776.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
775.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
773.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
773.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
773.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
770.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
766.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
766.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
760.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
760.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
759.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
754.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
754.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
752.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
748.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
743.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
742.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
742.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
740.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
740.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
739.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
739.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
735.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
732.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
731.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
731.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
730.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
728.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
728.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
726.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
721.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
719.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
717.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
715.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
714.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
711.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
710.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
709.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
704.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
704.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
702.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
697.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
694.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
693.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
693.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
690.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
688.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
683.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
683.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
681.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
680.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
679.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
677.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
674.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
673.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
671.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
671.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
666.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
664.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
663.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
661.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
657.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
654.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
654.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
649.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
645.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
644.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
633.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
630.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
630.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
630.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
629.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
628.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
626.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
626.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
623.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
613.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
612.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
612.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
608.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
606.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
605.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
605.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
603.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
601.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
595.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
595.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
591.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
591.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
587.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
583.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
582.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
566.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
553.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
550.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
549.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
548.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
540.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
539.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
516.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
512.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
507.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
506.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
504.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
496.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
489.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
470.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
465.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
448.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
423.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
391.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
355.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
345.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
305.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MYL6 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
755.0
Number of samples
231
Samples
Sample
Description
TPM
DO45285
0 years, male, NA, stage:3, alive, 480 days
2760.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
2742.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
2713.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
2311.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
2073.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
1918.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
1688.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
1663.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
1657.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
1633.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
1591.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
1586.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
1566.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
1469.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
1445.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
1441.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
1430.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
1420.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
1379.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1332.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
1310.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
1305.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
1289.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
1254.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
1248.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
1231.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
1151.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
1144.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
1121.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
1120.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
1110.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
1106.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
1105.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
1104.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
1100.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
1069.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
1065.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
1060.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
1053.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
1052.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
1047.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
1047.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
1033.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1026.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
995.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
981.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
974.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
969.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
964.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
914.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
909.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
908.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
901.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
897.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
894.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
886.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
883.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
879.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
868.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
856.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
856.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
853.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
851.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
850.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
850.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
840.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
836.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
827.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
825.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
825.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
823.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
821.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
816.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
812.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
789.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
783.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
783.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
783.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
782.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
781.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
781.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
773.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
767.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
764.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
759.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
759.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
757.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
743.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
742.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
741.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
737.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
731.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
730.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
728.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
728.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
713.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
703.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
694.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
691.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
691.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
687.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
684.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
677.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
677.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
676.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
674.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
673.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
673.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
672.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
669.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
667.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
667.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
665.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
657.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
654.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
654.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
649.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
647.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
646.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
642.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
638.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
638.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
638.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
637.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
635.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
632.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
631.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
627.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
611.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
606.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
604.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
599.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
597.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
592.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
589.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
588.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
588.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
587.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
586.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
586.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
585.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
585.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
585.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
582.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
577.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
574.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
567.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
565.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
565.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
564.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
563.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
557.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
555.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
547.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
546.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
540.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
537.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
536.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
534.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
534.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
533.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
522.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
522.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
521.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
520.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
512.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
506.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
505.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
504.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
492.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
491.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
491.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
491.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
488.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
487.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
486.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
484.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
482.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
482.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
480.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
480.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
477.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
477.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
475.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
467.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
464.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
462.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
460.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
460.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
459.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
455.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
455.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
453.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
449.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
447.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
447.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
438.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
434.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
430.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
428.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
425.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
397.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
392.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
391.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
388.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
385.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
364.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
357.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
356.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
351.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
345.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
342.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
339.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
338.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
336.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
330.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
330.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
326.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
298.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
297.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
289.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
286.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
285.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
269.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
246.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
238.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
233.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
225.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
191.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
188.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
182.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
192
Normal
0.7
311
Tumor
0.7
536
Normal
0.5
917
Tumor
0.5
223
Tumor
0.5
444
Normal
0.5
185
Tumor
0.5
1045
Tumor
0.5
498
Normal
0.4
881
Tumor
0.4
268
Normal
0.3
224
Normal
0.3
478
Normal
0.3
852
Normal
0.3
421
Tumor
0.3
982
Normal
0.3
447
Tumor
0.3
817
Tumor
0.3
124
Normal
0.3
916
Normal
0.3
434
Normal
0.3
126
Normal
0.3
188
Normal
0.3
813
Tumor
0.3
883
Tumor
0.3
445
Tumor
0.3
455
Tumor
0.3
814
Normal
0.3
878
Normal
0.3
297
Tumor
0.2
1028
Normal
0.2
1044
Normal
0.2
816
Normal
0.2
627
Tumor
0.2
563
Tumor
0.2
672
Normal
0.2
823
Tumor
0.2
635
Tumor
0.2
975
Tumor
0.2
416
Normal
0.2
448
Normal
0.2
913
Tumor
0.2
516
Normal
0.2
572
Normal
0.2
284
Normal
0.2
785
Tumor
0.2
386
Normal
0.2
412
Normal
0.2
538
Normal
0.2
778
Normal
0.2
214
Normal
0.2
331
Tumor
0.2
146
Normal
0.2
976
Normal
0.2
384
Normal
0.2
344
Normal
0.2
744
Normal
0.2
212
Normal
0.2
461
Tumor
0.2
868
Normal
0.2
857
Tumor
0.2
671
Tumor
0.2
786
Normal
0.2
958
Normal
0.1
195
Tumor
0.1
492
Normal
0.1
137
Tumor
0.1
777
Tumor
0.1
924
Normal
0.1
528
Normal
0.1
884
Normal
0.1
642
Normal
0.1
332
Normal
0.1
716
Normal
0.1
364
Normal
0.1
713
Tumor
0.1
723
Tumor
0.1
228
Normal
0.1
943
Tumor
0.1
818
Normal
0.1
213
Tumor
0.1
874
Normal
0.1
984
Normal
0.1
283
Tumor
0.1
312
Normal
0.1
375
Tumor
0.1
914
Normal
0.1
354
Normal
0.1
866
Normal
0.1
636
Normal
0.1
882
Normal
0.1
471
Tumor
0.1
715
Tumor
0.1
394
Normal
0.1
142
Normal
0.1
721
Tumor
0.1
515
Tumor
0.1
443
Tumor
0.1
524
Normal
0.1
738
Normal
0.1
218
Normal
0.1
433
Tumor
0.1
343
Tumor
0.1
327
Tumor
0.1
722
Normal
0.1
685
Tumor
0.1
863
Tumor
0.1
954
Normal
0.1
472
Normal
0.1
262
Normal
0.1
698
Normal
0.1
714
Normal
0.0
388
Normal
0.0
341
Tumor
0.0
446
Normal
0.0
921
Tumor
0.0
474
Normal
0.0
432
Normal
0.0
138
Normal
0.0
468
Normal
0.0
423
Tumor
0.0
527
Tumor
0.0
513
Tumor
0.0
286
Normal
0.0
546
Normal
0.0
422
Normal
0.0
277
Tumor
0.0
1032
Normal
0.0
366
Normal
0.0
352
Normal
0.0
686
Normal
0.0
912
Normal
0.0
465
Tumor
0.0
1022
Normal
0.0
272
Normal
0.0
628
Normal
0.0
211
Tumor
0.0
728
Normal
0.0
968
Normal
0.0
187
Tumor
0.0
112
Tumor
0.0
978
Normal
0.0
956
Normal
0.0
514
Normal
0.0
427
Tumor
0.0
415
Tumor
0.0
574
Normal
0.0
925
Tumor
0.0
141
Tumor
0.0
697
Tumor
0.0
1021
Tumor
0.0
426
Normal
0.0
615
Tumor
0.0
396
Normal
0.0
414
Normal
0.0
742
Normal
0.0
395
Tumor
0.0
568
Normal
0.0
428
Normal
0.0
298
Normal
0.0
966
Normal
0.0
392
Normal
0.0
481
Tumor
0.0
666
Normal
0.0
357
Tumor
0.0
618
Normal
0.0
696
Normal
0.0
462
Normal
0.0
558
Normal
0.0
362
Normal
0.0
545
Tumor
0.0
196
Normal
0.0
456
Normal
0.0
424
Normal
0.0
1026
Normal
0.0
867
Tumor
0.0
328
Normal
0.0
525
Tumor
0.0
662
Normal
0.0
952
Normal
0.0
746
Normal
0.0
756
Normal
0.0
363
Tumor
0.0
873
Tumor
0.0
944
Normal
0.0
162
Normal
0.0
186
Normal
-0.1
136
Normal
-0.1
172
Normal
-0.1
145
Tumor
-0.1
938
Normal
-0.1
376
Normal
-0.1
111
Normal
-0.1
494
Normal
-0.1
383
Tumor
-0.1
477
Tumor
-0.1
114
Normal
-0.1
824
Normal
-0.1
534
Normal
-0.1
923
Tumor
-0.1
232
Normal
-0.1
356
Normal
-0.1
355
Tumor
-0.1
1042
Normal
-0.1
922
Normal
-0.1
467
Tumor
-0.1
727
Tumor
-0.1
222
Normal
-0.1
1015
Tumor
-0.1
1027
Tumor
-0.1
365
Tumor
-0.1
488
Normal
-0.1
217
Tumor
-0.1
278
Normal
-0.1
918
Normal
-0.1
616
Normal
-0.1
864
Normal
-0.1
368
Normal
-0.1
977
Tumor
-0.1
518
Normal
-0.1
342
Normal
-0.1
148
Normal
-0.1
132
Normal
-0.1
647
Tumor
-0.1
641
Tumor
-0.1
258
Normal
-0.1
413
Tumor
-0.1
564
Normal
-0.1
482
Normal
-0.1
385
Tumor
-0.1
862
Normal
-0.1
858
Normal
-0.1
231
Tumor
-0.1
755
Tumor
-0.1
466
Normal
-0.1
452
Normal
-0.1
191
Tumor
-0.1
664
Normal
-0.1
1016
Normal
-0.1
963
Tumor
-0.1
436
Normal
-0.1
127
Tumor
-0.1
358
Normal
-0.2
911
Tumor
-0.2
128
Normal
-0.2
353
Tumor
-0.2
221
Tumor
-0.2
464
Normal
-0.2
135
Tumor
-0.2
361
Tumor
-0.2
964
Normal
-0.2
983
Tumor
-0.2
271
Tumor
-0.2
493
Tumor
-0.2
737
Tumor
-0.2
483
Tumor
-0.2
877
Tumor
-0.2
1046
Normal
-0.2
147
Tumor
-0.2
161
Tumor
-0.2
526
Normal
-0.2
617
Tumor
-0.2
131
Tumor
-0.2
955
Tumor
-0.2
451
Tumor
-0.2
1014
Normal
-0.2
425
Tumor
-0.2
743
Tumor
-0.2
1031
Tumor
-0.2
926
Normal
-0.2
567
Tumor
-0.2
648
Normal
-0.2
535
Tumor
-0.2
554
Normal
-0.2
981
Tumor
-0.2
953
Tumor
-0.2
661
Tumor
-0.3
393
Tumor
-0.3
314
Normal
-0.3
497
Tumor
-0.3
484
Normal
-0.3
724
Normal
-0.3
285
Tumor
-0.3
745
Tumor
-0.3
851
Tumor
-0.3
491
Tumor
-0.3
695
Tumor
-0.3
967
Tumor
-0.3
113
Tumor
-0.3
557
Tumor
-0.3
951
Tumor
-0.3
1043
Tumor
-0.3
261
Tumor
-0.3
171
Tumor
-0.3
861
Tumor
-0.3
915
Tumor
-0.3
387
Tumor
-0.3
257
Tumor
-0.3
313
Tumor
-0.3
523
Tumor
-0.3
815
Tumor
-0.3
571
Tumor
-0.4
665
Tumor
-0.4
553
Tumor
-0.4
865
Tumor
-0.4
1041
Tumor
-0.4
573
Tumor
-0.4
411
Tumor
-0.4
463
Tumor
-0.4
267
Tumor
-0.4
741
Tumor
-0.4
1025
Tumor
-0.4
125
Tumor
-0.4
937
Tumor
-0.4
351
Tumor
-0.5
435
Tumor
-0.5
663
Tumor
-0.5
517
Tumor
-0.5
533
Tumor
-0.5
367
Tumor
-0.5
431
Tumor
-0.5
391
Tumor
-0.5
227
Tumor
-0.5
473
Tumor
-0.6
957
Tumor
-0.6
123
Tumor
-0.6
487
Tumor
-0.6
965
Tumor
-0.6
1013
Tumor
-0.7
537
Tumor
-0.7
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.