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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSME1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
103.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
197.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
191.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
160.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
160.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
152.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
152.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
152.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
144.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
141.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
141.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
140.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
132.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
132.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
127.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
127.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
124.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
123.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
123.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
119.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
119.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
118.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
113.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
113.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
112.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
108.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
108.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
107.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
105.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
104.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
104.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
101.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
100.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
99.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
99.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
99.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
94.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
92.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
92.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
90.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
90.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
88.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
86.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
84.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
83.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
82.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
80.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
80.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
80.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
79.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
77.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
77.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
74.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
74.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
72.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
72.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
72.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
66.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
61.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
59.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
56.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
54.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
52.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
47.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSME1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
135.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
313.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
305.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
304.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
291.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
272.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
265.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
245.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
238.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
236.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
235.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
235.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
234.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
233.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
231.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
228.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
224.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
224.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
222.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
222.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
222.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
220.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
219.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
217.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
214.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
214.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
213.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
213.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
213.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
210.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
209.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
208.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
208.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
207.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
203.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
203.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
201.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
199.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
199.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
197.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
196.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
195.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
195.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
195.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
194.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
194.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
193.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
192.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
192.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
192.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
191.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
191.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
190.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
190.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
190.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
190.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
189.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
188.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
187.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
187.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
187.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
186.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
186.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
186.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
186.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
185.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
184.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
184.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
183.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
183.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
182.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
182.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
182.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
182.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
181.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
181.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
181.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
181.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
180.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
180.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
179.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
179.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
177.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
176.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
176.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
176.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
175.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
175.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
175.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
174.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
174.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
173.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
173.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
173.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
173.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
173.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
172.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
172.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
170.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
170.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
170.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
170.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
170.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
169.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
168.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
168.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
167.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
167.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
167.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
165.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
164.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
164.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
164.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
163.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
163.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
163.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
163.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
163.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
163.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
162.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
161.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
161.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
161.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
161.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
161.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
161.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
160.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
160.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
160.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
159.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
159.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
159.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
159.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
159.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
159.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
158.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
158.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
158.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
158.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
157.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
157.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
157.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
155.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
155.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
155.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
154.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
154.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
154.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
154.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
154.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
154.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
154.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
153.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
153.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
152.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
151.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
151.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
151.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
151.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
150.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
150.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
150.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
150.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
150.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
150.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
150.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
149.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
149.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
149.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
149.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
149.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
148.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
148.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
148.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
148.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
147.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
147.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
147.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
146.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
146.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
146.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
146.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
146.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
146.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
146.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
146.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
146.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
145.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
145.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
145.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
145.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
144.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
144.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
144.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
144.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
144.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
143.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
143.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
143.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
143.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
143.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
143.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
143.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
142.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
142.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
142.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
142.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
142.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
142.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
142.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
142.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
142.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
142.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
142.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
141.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
141.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
141.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
141.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
141.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
141.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
141.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
141.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
140.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
140.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
140.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
140.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
140.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
139.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
139.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
138.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
138.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
138.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
138.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
138.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
138.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
137.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
137.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
137.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
137.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
137.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
137.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
136.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
136.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
136.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
136.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
136.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
136.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
135.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
135.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
135.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
135.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
134.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
134.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
134.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
134.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
134.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
134.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
134.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
133.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
133.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
133.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
133.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
132.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
132.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
132.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
132.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
132.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
132.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
131.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
131.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
131.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
131.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
131.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
130.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
130.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
130.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
130.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
130.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
130.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
129.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
129.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
129.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
129.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
129.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
129.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
129.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
128.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
128.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
128.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
128.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
128.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
127.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
127.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
127.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
127.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
127.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
127.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
127.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
126.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
126.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
126.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
126.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
126.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
126.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
126.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
125.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
125.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
125.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
125.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
124.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
124.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
124.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
124.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
124.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
123.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
123.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
122.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
122.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
122.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
122.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
121.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
121.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
121.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
121.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
120.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
120.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
120.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
120.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
119.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
119.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
119.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
119.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
118.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
118.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
118.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
118.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
118.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
118.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
118.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
117.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
117.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
116.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
116.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
115.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
115.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
115.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
115.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
115.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
115.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
114.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
114.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
114.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
114.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
114.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
114.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
113.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
113.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
113.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
113.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
112.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
112.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
112.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
112.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
111.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
111.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
111.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
111.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
110.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
110.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
110.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
109.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
109.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
109.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
108.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
108.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
108.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
107.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
107.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
107.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
107.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
106.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
106.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
106.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
106.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
106.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
105.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
105.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
105.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
105.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
105.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
104.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
104.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
104.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
104.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
103.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
103.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
103.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
102.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
102.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
101.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
101.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
100.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
100.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
100.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
100.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
100.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
100.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
99.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
99.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
99.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
99.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
98.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
98.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
98.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
98.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
98.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
97.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
97.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
97.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
96.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
96.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
96.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
95.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
95.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
95.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
94.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
94.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
94.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
94.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
94.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
94.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
94.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
94.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
94.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
93.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
92.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
92.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
91.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
91.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
90.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
90.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
89.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
89.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
89.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
89.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
89.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
88.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
88.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
88.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
88.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
87.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
87.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
87.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
87.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
87.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
86.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
86.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
86.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
86.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
85.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
85.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
85.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
85.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
85.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
85.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
85.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
84.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
84.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
84.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
84.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
83.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
83.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
82.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
82.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
82.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
82.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
81.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
81.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
81.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
80.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
80.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
80.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
79.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
79.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
79.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
79.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
77.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
77.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
76.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
76.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
75.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
75.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
75.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
74.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
74.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
74.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
73.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
73.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
71.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
71.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
71.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
71.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
70.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
70.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
69.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
68.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
68.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
68.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
67.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
67.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
63.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
62.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
59.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
57.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
54.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
49.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
46.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
46.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
46.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
43.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
36.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSME1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
125.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
259.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
227.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
224.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
205.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
205.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
200.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
196.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
192.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
185.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
183.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
177.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
177.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
176.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
175.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
170.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
168.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
166.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
166.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
164.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
164.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
160.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
155.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
152.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
152.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
149.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
149.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
148.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
147.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
144.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
143.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
142.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
141.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
141.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
139.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
138.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
138.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
137.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
136.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
133.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
131.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
130.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
129.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
125.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
125.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
121.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
121.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
120.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
119.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
117.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
116.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
116.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
114.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
113.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
110.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
110.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
110.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
109.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
109.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
109.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
108.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
107.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
106.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
105.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
105.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
104.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
103.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
103.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
101.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
101.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
101.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
101.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
101.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
100.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
99.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
98.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
98.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
98.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
96.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
93.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
92.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
92.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
90.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
90.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
89.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
89.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
86.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
86.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
85.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
84.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
81.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
78.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
77.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
74.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
71.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
71.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
70.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
66.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
60.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
54.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSME1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
123.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
454.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
223.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
211.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
201.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
200.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
199.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
198.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
195.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
194.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
192.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
186.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
186.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
184.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
180.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
180.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
180.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
177.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
175.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
173.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
173.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
171.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
171.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
170.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
170.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
169.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
169.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
169.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
168.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
167.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
167.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
167.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
167.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
166.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
166.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
166.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
166.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
164.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
163.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
163.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
163.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
162.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
162.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
161.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
161.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
160.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
160.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
160.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
160.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
159.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
159.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
159.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
159.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
158.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
157.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
156.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
155.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
155.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
154.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
154.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
154.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
153.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
153.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
153.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
153.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
153.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
152.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
152.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
152.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
150.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
149.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
149.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
149.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
149.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
149.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
148.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
148.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
148.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
148.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
147.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
146.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
145.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
145.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
145.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
145.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
145.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
144.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
144.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
144.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
144.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
144.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
144.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
144.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
144.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
143.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
142.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
142.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
142.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
141.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
141.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
141.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
140.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
140.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
140.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
139.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
139.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
138.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
137.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
137.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
137.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
137.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
137.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
136.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
136.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
136.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
135.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
135.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
135.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
135.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
135.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
135.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
133.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
133.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
133.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
132.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
131.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
131.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
131.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
130.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
130.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
129.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
129.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
129.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
129.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
128.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
128.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
127.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
127.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
126.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
126.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
126.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
125.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
125.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
124.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
124.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
123.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
123.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
123.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
122.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
121.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
121.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
121.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
120.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
120.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
118.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
118.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
118.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
118.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
118.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
117.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
117.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
117.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
116.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
115.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
115.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
115.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
115.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
115.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
114.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
114.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
114.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
114.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
114.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
113.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
113.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
112.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
112.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
111.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
111.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
111.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
111.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
110.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
110.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
110.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
110.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
109.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
109.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
107.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
104.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
104.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
104.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
103.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
102.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
102.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
102.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
101.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
100.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
100.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
100.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
100.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
99.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
98.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
98.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
97.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
97.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
97.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
97.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
96.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
95.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
95.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
94.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
93.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
93.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
93.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
92.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
92.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
91.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
90.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
90.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
90.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
89.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
89.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
89.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
88.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
88.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
87.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
87.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
86.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
85.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
84.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
84.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
83.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
83.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
83.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
83.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
82.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
81.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
80.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
79.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
78.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
78.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
78.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
77.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
76.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
76.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
76.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
74.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
73.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
73.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
73.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
73.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
72.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
72.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
71.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
71.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
71.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
69.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
69.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
68.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
67.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
66.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
66.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
65.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
65.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
65.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
61.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
58.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
56.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
52.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
51.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
51.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
50.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
49.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
48.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
47.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
43.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
43.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
42.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
38.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
25.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
24.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
17.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
9.8
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078990003
Tumor
1.2
CPT0015730003
Tumor
1.2
CPT0079180003
Tumor
1.0
CPT0025880003
Tumor
0.9
CPT0065810003
Tumor
0.9
CPT0081880003
Tumor
0.8
CPT0012180003
Tumor
0.8
CPT0086870003
Tumor
0.7
CPT0001540009
Tumor
0.7
CPT0069000003
Tumor
0.6
CPT0079380003
Tumor
0.6
CPT0092160003
Tumor
0.6
CPT0023350003
Tumor
0.6
CPT0025110003
Tumor
0.6
CPT0017410003
Tumor
0.5
CPT0023690003
Tumor
0.5
CPT0025290003
Tumor
0.5
CPT0026410003
Tumor
0.5
CPT0021240003
Tumor
0.5
CPT0078660003
Tumor
0.5
CPT0024670003
Tumor
0.5
CPT0014370004
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0001260009
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0086360003
Tumor
0.4
CPT0077110003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0000640003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0088550004
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0002350011
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0075570001
Normal
0.2
CPT0078510003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0078830003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0076350001
Normal
0.2
CPT0001180009
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0025580004
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0012280003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0014450004
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0071150004
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0012900004
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0011410003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0078670001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0011240003
Tumor
-0.2
CPT0078940001
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0084560003
Tumor
-0.2
CPT0088710001
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0065750003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0086970003
Normal
-0.2
CPT0088480003
Tumor
-0.2
CPT0012090003
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0069160003
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0077310003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0092800003
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0010170001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0012370003
Tumor
-0.2
CPT0025610001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0079410003
Tumor
-0.2
CPT0007870001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0009060003
Tumor
-0.3
CPT0063330001
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0000780007
Tumor
-0.3
CPT0002370001
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0012920003
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0015910003
Tumor
-0.3
CPT0081620001
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0015810003
Tumor
-0.3
CPT0009080003
Normal
-0.3
CPT0088900003
Tumor
-0.3
CPT0079510001
Normal
-0.3
CPT0085670003
Tumor
-0.3
CPT0020020001
Normal
-0.3
CPT0012550003
Tumor
-0.3
CPT0026420001
Normal
-0.4
CPT0086950003
Tumor
-0.4
CPT0020130001
Normal
-0.4
CPT0014160003
Tumor
-0.4
CPT0079000001
Normal
-0.5
CPT0078530001
Normal
-0.5
CPT0079230003
Tumor
-0.5
CPT0012770003
Normal
-0.5
CPT0001340003
Tumor
-0.6
CPT0063630003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
