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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
2358.0
nTPM
GTEx:
2358.0
nTPM
FANTOM5:
564.8
Scaled Tags Per Million
Pig:
110.1
nTPM
Mouse:
238.0
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2358.0
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 2358.0
Samples: 105
Max nTPM: 4605.7
Min nTPM: 729.2
Std nTPM: 703.3
Median nTPM:
137_1
83 years, male
4605.7
506_1
65 years, male
4021.6
264_1
73 years, female
3880.2
376_1
75 years, female
3719.2
177_1
74 years, male
3618.2
163_1
78 years, male
3581.2
452_1
88 years, female
3480.1
173_1
67 years, male
3302.7
295_1
61 years, female
3298.1
394_1
75 years, female
3171.9
351_1
91 years, male
3127.9
384_1
83 years, male
3109.0
18_1
88 years, male
3103.1
379_1
60 years, male
3065.3
189_1
76 years, male
3038.2
17_1
71 years, male
3034.7
322_1
76 years, male
3029.5
4_1
88 years, female
3020.6
386_1
76 years, male
2984.7
99_1
64 years, male
2983.4
145_1
84 years, male
2968.4
308_1
70 years, female
2949.8
317_1
60 years, male
2947.7
406_1
79 years, male
2924.1
243_1
75 years, male
2893.5
396_1
62 years, male
2889.7
288_1
66 years, female
2883.3
115_1
83 years, male
2881.7
389_1
86 years, female
2879.7
503_1
68 years, male
2857.7
237_1
82 years, male
2838.5
447_1
81 years, male
2769.1
377_1
82 years, female
2706.7
353_1
82 years, female
2677.0
356_1
87 years, female
2661.2
319_1
81 years, male
2630.9
349_1
83 years, male
2621.4
404_1
82 years, female
2548.3
518_1
75 years, female
2502.2
172_1
72 years, female
2501.4
375_1
74 years, female
2484.1
316_1
62 years, male
2437.1
480_1
63 years, male
2411.5
347_1
72 years, male
2385.2
348_1
84 years, male
2373.6
315_1
62 years, female
2366.2
314_1
67 years, male
2364.6
218_1
71 years, female
2364.0
126_1
63 years, male
2341.4
142_1
61 years, female
2317.3
320_1
89 years, female
2289.6
526_1
61 years, male
2287.3
354_1
81 years, female
2284.1
501_1
88 years, male
2275.4
41_1
94 years, female
2266.8
120_1
70 years, female
2259.4
109_1
81 years, female
2254.4
405_1
91 years, male
2219.7
321_1
62 years, female
2211.5
335_1
73 years, female
2206.6
313_1
79 years, female
2190.8
425_1
59 years, female
2183.0
6_1
73 years, female
2134.7
254_1
77 years, female
2128.6
251_1
78 years, male
2119.5
42_1
85 years, male
2103.3
35_1
74 years, female
2076.0
318_1
68 years, male
2074.0
246_1
77 years, male
2067.7
291_1
76 years, male
2066.9
350_1
84 years, female
2061.1
117_1
61 years, male
2054.1
265_1
87 years, male
2049.5
9_1
66 years, female
2046.1
217_1
76 years, male
2030.9
266_1
85 years, male
2021.3
286_1
68 years, female
2016.6
293_1
68 years, female
1993.4
292_1
71 years, male
1981.4
229_1
69 years, female
1962.1
352_1
62 years, male
1936.0
307_1
66 years, female
1915.0
517_1
88 years, male
1912.9
468_1
89 years, male
1907.8
355_1
70 years, female
1907.2
311_1
78 years, male
1879.1
81_1
67 years, male
1863.1
119_1
70 years, female
1837.0
324_1
76 years, male
1774.9
162_1
79 years, female
1692.0
2_1
77 years, female
1626.1
139_1
64 years, female
1512.0
495_1
57 years, female
1500.5
153_1
70 years, female
1417.0
89_1
63 years, male
1414.2
414_1
84 years, female
1365.1
499_1
55 years, female
1336.4
43_1
64 years, female
1302.3
32_1
67 years, male
1280.8
149_1
88 years, male
1227.0
415_1
77 years, female
1030.0
413_1
59 years, female
962.1
466_1
57 years, female
953.5
491_1
89 years, female
838.5
490_1
67 years, female
729.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.