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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
169.3
nTPM
HPA Brain:
315.7
nTPM
GTEx:
169.3
nTPM
FANTOM5:
220.4
Scaled Tags Per Million
Pig:
146.5
nTPM
Mouse:
120.7
nTPM
Allen mouse:
3.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
315.7
Sample id
Sample description
nTPM
Amygdala nTPM: 315.7
2814
Male, age 76, right hemisphere
506.8
2514
Male, age 75, right hemisphere
333.9
2695
Female, age 67, right hemisphere
284.8
2517
Female, age 94, left hemisphere
228.4
1987
Female, age 91, left hemisphere
224.7
Basal amygdala nTPM: 180.0
1955
Male, age 76, both hemispheres
244.7
2110
Male, age 80, left hemisphere
216.5
2827
Female, age 67, right hemisphere
197.3
2685
Female, age 94, left hemisphere
181.6
2609
Male, age 75, right hemisphere
152.6
2243
Female, age 91, right hemisphere
87.2
Central amygdala nTPM: 235.3
1905
Male, age 76, both hemispheres
465.8
2515
Male, age 75, right hemisphere
208.8
2239
Male, age 80, left hemisphere
205.3
2701
Female, age 91, right hemisphere
181.4
2826
Female, age 94, left hemisphere
115.3
Corticomedial amygdala nTPM: 136.2
2428
Male, age 75, right hemisphere
187.2
2429
Female, age 94, left hemisphere
186.9
2240
Male, age 76, both hemispheres
153.3
2535
Female, age 67, right hemisphere
130.8
2829
Male, age 80, left hemisphere
103.1
2242
Female, age 91, right hemisphere
55.9
Lateral amygdala nTPM: 284.7
1883
Male, age 76, both hemispheres
523.6
2516
Male, age 75, right hemisphere
291.9
2830
Female, age 67, right hemisphere
284.2
2256
Male, age 80, left hemisphere
224.9
2534
Female, age 94, left hemisphere
196.0
2255
Female, age 91, right hemisphere
187.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
169.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 169.3
Samples: 152
Max nTPM: 847.3
Min nTPM: 10.8
Std nTPM: 131.1
Median nTPM: 128.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
847.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
759.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
677.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
513.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
503.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
494.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
486.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
445.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
387.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
376.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
375.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
357.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
338.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
309.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
307.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
293.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
289.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
287.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
281.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
276.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
273.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
267.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
258.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
256.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
249.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
246.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
240.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
235.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
231.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
228.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
226.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
226.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
225.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
224.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
221.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
221.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
218.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
213.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
212.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
211.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
211.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
211.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
210.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
209.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
201.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
195.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
194.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
192.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
191.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
184.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
183.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
181.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
176.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
174.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
170.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
169.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
168.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
164.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
162.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
160.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
159.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
158.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
158.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
158.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
157.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
157.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
156.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
156.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
145.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
144.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
144.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
142.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
139.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
137.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
137.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
128.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
127.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
127.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
126.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
126.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
125.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
123.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
122.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
122.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
121.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
120.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
119.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
119.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
117.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
117.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
114.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
113.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
113.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
113.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
111.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
107.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
105.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
103.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
102.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
101.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
99.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
97.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
96.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
96.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
96.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
94.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
92.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
92.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
91.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
87.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
86.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
85.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
85.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
84.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
84.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
84.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
84.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
83.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
81.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
81.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
80.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
78.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
78.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
76.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
74.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
73.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
72.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
72.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
67.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
65.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
65.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
62.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
62.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
58.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
57.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
56.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
56.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
55.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
55.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
52.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
48.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
44.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
43.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
41.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
41.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
40.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
39.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
37.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
36.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
34.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
23.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
10.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
120.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 120.7
Samples: 4
Max nTPM: 180.7
Min nTPM: 93.4
Sample A
Male
105.1
Sample B
Male
93.4
Sample C
Female
180.7
Sample D
Female
103.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.