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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
463.8
nTPM
HPA Brain:
729.3
nTPM
GTEx:
463.8
nTPM
FANTOM5:
2002.3
Scaled Tags Per Million
Pig:
1145.1
nTPM
Mouse:
683.9
nTPM
Allen mouse:
2.8
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
729.3
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 591.8
2411
Female, age 72, unknown
1101.6
2019
Male, age 18, unknown
823.1
1870
Female, age 42, unknown
796.8
1830
Male, age 51, unknown
761.7
1833
Male, age 53, unknown
643.5
2828
Female, age 72, unknown
557.4
1827
Male, age 72, unknown
394.6
2219
Male, age 76, both hemispheres
371.6
2666
Male, age 74, left hemisphere
256.2
2586
Male, age 75, left hemisphere
211.8
Dorsal raphe nucleus nTPM: 521.1
2750
Male, age 76, both hemispheres
1078.4
2016
Female, age 72, unknown
475.7
1828
Male, age 53, unknown
419.2
2298
Female, age 72, unknown
358.1
2047
Male, age 72, unknown
273.9
Inferior colliculus nTPM: 344.0
1848
Female, age 42, unknown
396.8
1890
Male, age 53, unknown
385.6
2097
Female, age 72, unknown
329.0
2849
Male, age 72, unknown
264.7
Median raphe nucleus nTPM: 471.0
2220
Male, age 76, midline
471.0
Periaquaductal grey, anterior nTPM: 284.7
2502
Female, age 75, unknown
320.4
1947
Male, age 18, unknown
303.3
1795
Male, age 51, unknown
230.4
Periaquaductal grey, dorsal nTPM: 233.1
2464
Female, age 72, unknown
453.1
1831
Male, age 72, unknown
251.6
1840
Male, age 53, unknown
120.4
2850
Male, age 76, both hemispheres
107.4
Periaquaductal grey, lateral nTPM: 304.4
2272
Male, age 74, both hemispheres
420.3
2053
Male, age 18, unknown
360.9
2140
Male, age 76, both hemispheres
131.9
Pretectal area nTPM: 367.3
2316
Male, age 76, right hemisphere
529.9
2273
Male, age 74, both hemispheres
477.7
1815
Male, age 53, unknown
457.2
2407
Male, age 75, both hemispheres
410.6
2007
Male, age 72, unknown
382.7
1817
Female, age 42, unknown
371.4
2667
Female, age 75, unknown
367.9
2825
Male, age 18, unknown
337.7
2224
Female, age 72, unknown
317.8
1944
Female, age 72, unknown
221.2
1816
Male, age 51, unknown
166.5
Red nucleus nTPM: 729.3
1821
Female, age 72, unknown
1033.9
1865
Male, age 51, unknown
906.5
1904
Male, age 53, unknown
856.2
2823
Male, age 76, right hemisphere
839.7
2769
Male, age 72, unknown
824.3
2227
Male, age 72, unknown
823.8
2785
Male, age 18, unknown
763.1
2503
Female, age 72, unknown
697.1
1954
Female, age 42, unknown
684.1
2588
Male, age 74, left hemisphere
497.0
2725
Female, age 75, unknown
461.6
2584
Male, age 75, left hemisphere
364.7
Substantia nigra nTPM: 365.8
1851
Male, age 51, unknown
481.6
1889
Female, age 72, unknown
466.3
2590
Female, age 75, unknown
416.3
2409
Female, age 72, unknown
392.8
1941
Male, age 53, unknown
387.6
2241
Male, age 72, unknown
365.9
1916
Female, age 42, unknown
360.0
2583
Male, age 75, right hemisphere
349.1
2699
Male, age 18, unknown
260.1
2665
Male, age 74, both hemispheres
178.1
Superior colliculus nTPM: 418.3
1913
Female, age 42, unknown
586.9
1895
Male, age 76, right hemisphere
585.5
2587
Male, age 74, left hemisphere
575.6
1995
Male, age 72, unknown
555.8
1839
Male, age 51, unknown
440.5
2668
Female, age 75, unknown
418.6
1796
Male, age 53, unknown
348.7
2087
Female, age 72, unknown
268.1
2261
Male, age 18, unknown
223.4
2664
Male, age 75, both hemispheres
180.1
Ventral tegmental area nTPM: 571.2
2223
Female, age 72, unknown
1025.5
2410
Female, age 72, unknown
689.4
1942
Male, age 51, unknown
472.5
2021
Male, age 53, unknown
438.1
2218
Male, age 76, both hemispheres
411.0
1915
Female, age 42, unknown
391.2
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
463.8
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 463.8
Samples: 139
Max nTPM: 2326.6
Min nTPM: 129.9
Std nTPM: 308.6
Median nTPM: 381.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
2326.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
1463.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
1306.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
1290.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
1232.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
1184.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
1181.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
1125.9
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
1038.3
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
893.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
886.4
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
876.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
814.4
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
812.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
811.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
808.1
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
799.3
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
777.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
763.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
735.1
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
714.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
708.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
671.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
643.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
640.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
636.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
613.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
606.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
601.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
600.5
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
593.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
585.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
567.4
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
557.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
554.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
544.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
537.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
527.8
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
526.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
526.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
525.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
517.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
516.0
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
495.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
485.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
478.0
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
477.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
459.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
459.2
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
449.5
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
448.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
446.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
444.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
441.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
441.1
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
436.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
426.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
420.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
420.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
406.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
405.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
398.7
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
394.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
387.6
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
387.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
387.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
385.4
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
384.3
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
382.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
381.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
380.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
376.7
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
375.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
372.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
372.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
372.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
369.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
364.9
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
361.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
359.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
354.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
352.3
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
351.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
345.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
340.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
331.3
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
330.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
323.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
323.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
313.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
311.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
309.7
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
308.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
299.7
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
296.1
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
295.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
294.0
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
293.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
291.7
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
288.8
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
286.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
285.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
283.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
272.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
265.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
262.7
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
260.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
254.6
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
245.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
244.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
243.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
242.5
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
238.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
238.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
229.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
226.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
222.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
220.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
219.4
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
217.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
210.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
209.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
207.9
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
203.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
198.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
193.9
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
182.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
179.5
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
177.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
175.7
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
175.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
168.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
158.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
157.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
139.5
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
136.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
135.6
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
135.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
129.9
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
683.9
Mouse sample
Sample description
nTPM
Midbrain nTPM: 683.9
Samples: 4
Max nTPM: 723.2
Min nTPM: 629.5
Sample A
Male
670.4
Sample B
Male
629.5
Sample C
Female
723.2
Sample D
Female
712.4
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.