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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FH is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
134.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
586.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
504.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
490.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
429.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
367.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
329.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
321.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
312.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
303.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
301.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
300.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
292.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
277.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
277.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
268.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
267.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
261.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
260.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
255.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
250.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
248.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
248.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
246.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
243.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
242.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
241.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
241.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
237.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
236.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
231.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
230.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
230.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
229.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
229.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
227.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
227.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
227.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
226.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
221.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
221.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
219.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
218.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
217.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
212.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
211.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
211.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
210.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
210.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
209.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
204.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
202.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
198.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
197.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
196.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
196.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
194.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
193.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
193.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
193.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
192.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
191.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
190.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
189.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
189.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
188.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
187.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
187.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
186.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
186.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
186.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
184.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
183.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
182.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
181.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
179.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
179.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
179.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
178.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
178.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
176.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
176.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
175.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
173.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
172.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
170.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
170.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
170.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
169.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
167.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
166.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
166.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
164.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
163.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
163.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
162.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
162.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
161.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
159.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
159.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
158.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
158.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
158.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
157.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
157.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
156.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
156.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
155.9
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
155.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
155.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
152.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
149.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
149.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
149.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
148.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
148.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
147.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
147.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
146.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
145.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
145.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
144.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
144.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
142.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
141.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
141.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
141.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
139.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
139.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
139.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
138.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
137.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
137.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
136.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
136.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
136.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
136.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
136.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
136.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
136.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
136.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
135.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
135.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
135.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
135.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
134.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
134.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
133.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
133.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
133.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
132.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
132.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
131.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
131.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
130.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
129.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
128.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
128.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
127.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
126.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
126.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
125.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
125.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
125.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
125.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
123.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
123.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
122.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
122.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
122.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
122.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
121.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
121.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
120.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
120.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
120.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
119.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
119.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
119.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
119.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
119.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
117.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
116.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
116.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
115.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
115.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
115.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
115.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
115.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
114.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
114.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
114.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
113.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
113.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
113.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
112.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
112.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
112.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
112.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
112.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
112.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
111.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
111.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
111.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
111.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
111.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
111.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
110.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
110.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
109.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
109.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
109.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
109.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
109.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
109.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
108.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
108.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
108.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
107.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
107.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
107.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
106.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
105.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
104.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
104.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
104.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
103.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
103.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
103.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
103.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
102.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
102.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
101.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
100.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
100.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
100.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
100.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
100.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
99.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
99.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
99.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
99.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
98.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
97.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
97.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
96.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
96.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
95.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
94.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
93.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
93.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
92.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
92.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
90.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
89.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
89.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
89.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
89.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
89.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
89.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
89.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
88.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
88.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
88.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
88.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
87.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
87.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
87.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
87.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
86.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
86.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
86.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
86.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
86.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
86.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
85.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
84.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
84.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
84.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
83.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
83.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
83.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
83.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
82.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
82.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
82.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
82.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
81.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
81.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
80.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
80.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
80.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
80.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
79.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
78.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
76.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
76.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
75.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
75.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
75.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
75.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
74.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
73.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
73.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
73.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
72.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
72.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
72.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
71.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
71.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
69.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
69.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
69.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
69.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
69.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
68.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
68.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
67.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
66.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
66.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
64.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
64.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
63.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
63.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
62.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
61.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
61.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
58.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
57.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
57.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
55.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
55.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
55.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
55.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
55.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
53.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
52.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
52.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
52.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
52.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
51.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
51.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
51.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
50.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
50.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
48.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
48.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
47.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
47.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
47.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
45.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
44.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
43.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
43.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
43.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
42.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
42.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
41.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
40.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
34.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
31.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
30.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FH is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
122.4
Number of samples
231
Samples
Sample
Description
TPM
DO45117
0 years, female, NA, stage:2, dead, 1110 days
681.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
408.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
366.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
359.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
345.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
298.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
293.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
275.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
266.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
255.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
253.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
238.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
237.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
232.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
226.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
222.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
220.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
217.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
214.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
213.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
211.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
210.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
209.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
208.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
206.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
204.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
203.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
202.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
202.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
200.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
199.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
197.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
197.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
196.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
195.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
189.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
189.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
188.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
185.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
185.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
182.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
175.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
174.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
173.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
173.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
173.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
171.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
171.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
168.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
165.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
165.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
164.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
162.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
162.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
159.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
157.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
157.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
157.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
153.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
153.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
151.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
151.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
151.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
151.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
150.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
148.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
147.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
145.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
145.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
144.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
142.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
140.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
140.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
139.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
139.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
138.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
135.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
135.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
133.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
132.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
131.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
129.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
126.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
125.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
125.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
124.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
123.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
123.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
123.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
121.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
120.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
119.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
119.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
119.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
118.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
118.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
117.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
117.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
115.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
115.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
114.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
113.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
111.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
110.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
110.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
109.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
109.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
109.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
109.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
109.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
108.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
107.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
106.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
105.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
105.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
104.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
103.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
103.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
102.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
102.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
102.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
101.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
100.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
100.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
99.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
99.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
99.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
98.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
98.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
98.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
97.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
97.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
97.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
97.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
96.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
96.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
94.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
94.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
94.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
93.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
93.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
93.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
92.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
92.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
92.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
91.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
91.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
89.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
88.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
87.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
87.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
86.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
86.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
86.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
86.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
85.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
85.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
85.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
83.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
83.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
82.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
81.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
81.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
79.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
78.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
77.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
77.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
76.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
75.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
75.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
74.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
74.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
74.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
74.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
72.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
72.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
71.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
71.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
70.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
68.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
68.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
67.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
66.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
64.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
63.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
63.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
62.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
61.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
61.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
61.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
60.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
59.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
58.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
57.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
56.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
55.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
55.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
55.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
55.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
54.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
54.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
53.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
53.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
53.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
53.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
51.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
48.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
47.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
47.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
47.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
47.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
46.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
43.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
42.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
39.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
38.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
37.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
36.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
36.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
35.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
35.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
35.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
33.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
32.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
32.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
31.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
30.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
29.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
29.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
24.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
24.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
627
Tumor
1.2
393
Tumor
0.9
227
Tumor
0.8
357
Tumor
0.8
361
Tumor
0.6
1043
Tumor
0.6
452
Normal
0.6
465
Tumor
0.5
571
Tumor
0.5
128
Normal
0.5
436
Normal
0.4
123
Tumor
0.4
515
Tumor
0.4
615
Tumor
0.4
186
Normal
0.4
742
Normal
0.4
426
Normal
0.4
411
Tumor
0.4
314
Normal
0.4
342
Normal
0.4
114
Normal
0.4
171
Tumor
0.4
196
Normal
0.4
445
Tumor
0.4
698
Normal
0.4
915
Tumor
0.4
777
Tumor
0.4
745
Tumor
0.3
388
Normal
0.3
786
Normal
0.3
172
Normal
0.3
462
Normal
0.3
636
Normal
0.3
132
Normal
0.3
568
Normal
0.3
481
Tumor
0.3
648
Normal
0.3
313
Tumor
0.3
414
Normal
0.3
635
Tumor
0.3
1032
Normal
0.3
618
Normal
0.3
534
Normal
0.3
722
Normal
0.3
868
Normal
0.3
448
Normal
0.3
358
Normal
0.3
332
Normal
0.3
278
Normal
0.3
214
Normal
0.3
423
Tumor
0.3
162
Normal
0.3
356
Normal
0.3
923
Tumor
0.3
746
Normal
0.3
756
Normal
0.3
432
Normal
0.3
744
Normal
0.3
394
Normal
0.3
376
Normal
0.3
344
Normal
0.3
222
Normal
0.3
428
Normal
0.3
738
Normal
0.3
912
Normal
0.2
824
Normal
0.2
564
Normal
0.2
1046
Normal
0.2
546
Normal
0.2
231
Tumor
0.2
258
Normal
0.2
911
Tumor
0.2
1013
Tumor
0.2
882
Normal
0.2
864
Normal
0.2
914
Normal
0.2
228
Normal
0.2
862
Normal
0.2
424
Normal
0.2
354
Normal
0.2
257
Tumor
0.2
446
Normal
0.2
148
Normal
0.2
366
Normal
0.2
111
Normal
0.2
142
Normal
0.2
298
Normal
0.2
723
Tumor
0.2
863
Tumor
0.2
1026
Normal
0.2
944
Normal
0.2
232
Normal
0.2
466
Normal
0.2
616
Normal
0.2
858
Normal
0.2
1022
Normal
0.2
938
Normal
0.2
451
Tumor
0.2
464
Normal
0.2
422
Normal
0.2
922
Normal
0.2
721
Tumor
0.2
572
Normal
0.2
878
Normal
0.2
642
Normal
0.2
412
Normal
0.2
392
Normal
0.2
138
Normal
0.2
488
Normal
0.2
818
Normal
0.2
925
Tumor
0.2
526
Normal
0.2
472
Normal
0.2
468
Normal
0.1
647
Tumor
0.1
954
Normal
0.1
328
Normal
0.1
964
Normal
0.1
686
Normal
0.1
482
Normal
0.1
147
Tumor
0.1
513
Tumor
0.1
867
Tumor
0.1
628
Normal
0.1
286
Normal
0.1
1016
Normal
0.1
136
Normal
0.1
124
Normal
0.1
528
Normal
0.1
145
Tumor
0.1
696
Normal
0.1
191
Tumor
0.1
1027
Tumor
0.1
327
Tumor
0.1
755
Tumor
0.1
574
Normal
0.1
728
Normal
0.1
514
Normal
0.1
714
Normal
0.1
396
Normal
0.1
218
Normal
0.1
1014
Normal
0.1
352
Normal
0.1
518
Normal
0.1
456
Normal
0.1
716
Normal
0.1
666
Normal
0.1
484
Normal
0.1
816
Normal
0.1
866
Normal
0.1
924
Normal
0.1
976
Normal
0.1
662
Normal
0.1
141
Tumor
0.1
664
Normal
0.1
146
Normal
0.1
365
Tumor
0.1
554
Normal
0.1
443
Tumor
0.1
884
Normal
0.1
926
Normal
0.1
785
Tumor
0.1
873
Tumor
0.1
416
Normal
0.1
558
Normal
0.1
362
Normal
0.1
523
Tumor
0.1
982
Normal
0.1
112
Tumor
0.1
487
Tumor
0.1
284
Normal
0.0
262
Normal
0.0
1044
Normal
0.0
474
Normal
0.0
1031
Tumor
0.0
126
Normal
0.0
312
Normal
0.0
386
Normal
0.0
741
Tumor
0.0
1042
Normal
0.0
778
Normal
0.0
1041
Tumor
0.0
368
Normal
0.0
874
Normal
0.0
672
Normal
0.0
981
Tumor
0.0
494
Normal
0.0
135
Tumor
0.0
364
Normal
0.0
272
Normal
0.0
984
Normal
0.0
461
Tumor
0.0
553
Tumor
0.0
968
Normal
0.0
857
Tumor
0.0
852
Normal
0.0
958
Normal
0.0
1045
Tumor
0.0
435
Tumor
0.0
563
Tumor
0.0
952
Normal
0.0
1028
Normal
0.0
978
Normal
-0.1
127
Tumor
-0.1
918
Normal
-0.1
977
Tumor
-0.1
434
Normal
-0.1
187
Tumor
-0.1
966
Normal
-0.1
538
Normal
-0.1
955
Tumor
-0.1
431
Tumor
-0.1
212
Normal
-0.1
865
Tumor
-0.1
823
Tumor
-0.1
665
Tumor
-0.1
224
Normal
-0.1
956
Normal
-0.1
967
Tumor
-0.1
137
Tumor
-0.1
478
Normal
-0.1
557
Tumor
-0.2
384
Normal
-0.2
188
Normal
-0.2
267
Tumor
-0.2
195
Tumor
-0.2
268
Normal
-0.2
921
Tumor
-0.2
1025
Tumor
-0.2
517
Tumor
-0.2
277
Tumor
-0.2
498
Normal
-0.2
444
Normal
-0.2
483
Tumor
-0.2
527
Tumor
-0.3
516
Normal
-0.3
524
Normal
-0.3
221
Tumor
-0.3
353
Tumor
-0.3
433
Tumor
-0.3
916
Normal
-0.3
695
Tumor
-0.3
415
Tumor
-0.3
113
Tumor
-0.3
697
Tumor
-0.3
492
Normal
-0.3
213
Tumor
-0.3
217
Tumor
-0.3
537
Tumor
-0.3
727
Tumor
-0.3
192
Normal
-0.3
953
Tumor
-0.4
713
Tumor
-0.4
387
Tumor
-0.4
533
Tumor
-0.4
261
Tumor
-0.4
813
Tumor
-0.4
861
Tumor
-0.4
567
Tumor
-0.4
125
Tumor
-0.4
641
Tumor
-0.4
477
Tumor
-0.4
1021
Tumor
-0.5
883
Tumor
-0.5
421
Tumor
-0.5
491
Tumor
-0.5
297
Tumor
-0.5
391
Tumor
-0.5
963
Tumor
-0.5
463
Tumor
-0.5
363
Tumor
-0.5
1015
Tumor
-0.5
724
Normal
-0.5
814
Normal
-0.5
536
Normal
-0.5
185
Tumor
-0.5
493
Tumor
-0.5
161
Tumor
-0.5
467
Tumor
-0.6
743
Tumor
-0.6
851
Tumor
-0.6
685
Tumor
-0.6
573
Tumor
-0.6
471
Tumor
-0.6
341
Tumor
-0.6
383
Tumor
-0.6
881
Tumor
-0.6
715
Tumor
-0.6
271
Tumor
-0.6
951
Tumor
-0.6
617
Tumor
-0.6
975
Tumor
-0.6
663
Tumor
-0.7
913
Tumor
-0.7
737
Tumor
-0.7
473
Tumor
-0.7
223
Tumor
-0.7
937
Tumor
-0.7
447
Tumor
-0.7
497
Tumor
-0.7
943
Tumor
-0.7
957
Tumor
-0.7
413
Tumor
-0.8
355
Tumor
-0.8
375
Tumor
-0.8
427
Tumor
-0.8
455
Tumor
-0.8
525
Tumor
-0.8
385
Tumor
-0.8
425
Tumor
-0.9
815
Tumor
-0.9
817
Tumor
-0.9
131
Tumor
-0.9
877
Tumor
-1.0
395
Tumor
-1.0
351
Tumor
-1.0
343
Tumor
-1.0
983
Tumor
-1.0
367
Tumor
-1.0
331
Tumor
-1.0
311
Tumor
-1.1
285
Tumor
-1.2
535
Tumor
-1.2
965
Tumor
-1.2
283
Tumor
-1.3
671
Tumor
-1.3
917
Tumor
-1.3
545
Tumor
-1.3
661
Tumor
-1.3
211
Tumor
-1.4
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.