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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USP48 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
69.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
27.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
25.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
25.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
25.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
20.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
18.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
17.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
14.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
14.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
13.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
13.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
13.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
13.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
13.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
12.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
12.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
12.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
12.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
12.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
12.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
12.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
11.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
11.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
11.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
11.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
10.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
9.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
9.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
9.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
9.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
8.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
7.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
7.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
6.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
6.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
5.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
3.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
2.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USP48 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
40.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
38.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
36.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
34.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
33.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
33.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
32.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
32.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
31.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
31.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
31.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
31.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
30.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
30.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
30.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
29.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
29.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
28.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
28.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
28.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
28.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
28.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
28.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
28.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
28.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
28.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
28.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
27.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
27.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
27.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
27.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
27.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
27.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
27.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
27.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
27.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
27.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
27.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
26.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
26.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
26.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
26.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
26.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
26.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
26.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
26.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
26.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
26.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
26.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
26.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
25.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
25.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
25.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
25.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
25.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
25.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
25.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
25.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
25.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
25.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
25.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
25.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
25.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
25.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
25.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
24.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
24.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
24.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
24.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
24.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
24.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
24.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
24.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
24.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
24.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
24.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
24.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
24.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
24.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
24.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
23.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
23.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
23.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
23.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
23.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
23.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
23.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
23.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
23.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
23.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
23.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
23.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
23.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
23.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
23.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
23.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
23.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
23.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
23.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
23.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
23.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
22.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
22.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
22.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
22.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
22.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
22.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
22.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
22.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
22.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
22.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
22.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
22.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
22.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
22.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
22.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
22.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
22.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
22.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
22.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
22.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
22.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
21.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
21.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
21.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
21.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
21.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
21.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
21.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
21.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
21.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
21.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
21.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
21.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
21.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
21.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
21.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
21.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
21.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
21.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
21.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
21.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
21.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
21.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
21.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
21.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
21.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
20.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
20.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
20.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
20.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
20.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
20.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
20.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
20.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
20.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
20.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
20.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
20.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
20.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
20.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
20.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
20.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
20.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
20.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
20.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
20.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
20.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
20.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
20.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
20.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
20.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
20.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
20.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
20.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
20.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
20.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
20.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
20.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
19.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
19.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
19.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
19.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
19.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
19.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
19.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
19.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
19.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
19.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
19.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
19.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
19.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
19.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
19.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
19.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
19.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
19.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
19.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
18.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
18.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
18.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
18.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
18.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
18.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
18.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
18.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
18.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
18.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
18.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
18.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
18.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
18.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
18.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
18.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
18.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
18.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
18.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
18.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
18.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
18.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
18.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
18.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
18.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
18.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
17.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
17.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
17.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
17.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
17.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
17.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
17.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
17.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
17.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
17.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
17.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
17.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
17.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
17.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
17.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
17.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
17.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
17.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
17.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
17.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
17.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
17.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
17.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
17.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
17.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
17.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
17.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
17.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
17.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
17.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
16.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
16.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
16.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
16.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
16.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
16.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
16.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
16.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
16.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
16.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
16.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
16.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
16.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
16.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
16.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
16.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
16.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
16.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
16.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
16.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
15.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
15.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
15.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
15.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
15.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
15.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
15.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
15.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
15.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
15.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
15.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
15.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
15.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
15.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
15.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
15.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
15.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
15.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
15.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
15.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
15.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
15.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
15.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
15.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
15.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
15.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
15.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
15.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
15.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
15.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
15.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
14.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
14.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
14.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
14.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
14.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
14.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
14.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
14.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
14.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
14.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
14.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
14.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
14.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
14.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
14.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
14.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
14.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
14.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
14.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
14.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
14.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
13.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
13.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
13.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
13.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
13.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
13.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
13.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
13.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
13.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
13.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
13.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
13.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
13.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
13.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
13.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
13.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
13.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
13.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
13.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
13.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
12.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
12.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
12.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
12.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
12.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
12.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
12.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
12.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
12.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
12.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
12.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
12.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
12.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
12.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
12.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
12.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
11.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
11.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
11.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
11.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
11.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
11.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
11.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
11.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
11.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
11.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
11.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
11.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
11.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
11.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
11.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
10.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
10.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
10.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
10.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
10.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
9.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
9.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
9.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
9.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
9.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
8.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
8.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
8.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
8.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
8.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
8.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
7.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
7.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
7.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
7.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
6.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
6.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
6.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
5.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USP48 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
42.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
38.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
37.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
37.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
36.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
36.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
35.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
34.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
33.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
33.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
32.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
32.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
32.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
31.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
31.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
31.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
31.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
31.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
30.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
30.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
30.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
30.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
30.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
29.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
29.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
29.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
29.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
29.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
28.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
28.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
28.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
27.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
27.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
27.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
27.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
27.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
26.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
26.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
26.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
26.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
25.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
25.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
25.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
25.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
25.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
24.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
24.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
24.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
23.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
23.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
23.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
22.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
22.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
22.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
22.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
22.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
21.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
21.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
21.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
21.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
21.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
20.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
20.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
20.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
19.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
19.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
19.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
18.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
18.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
18.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
17.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
17.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
16.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
16.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
16.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
16.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
16.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
16.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
15.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
15.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
15.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
14.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
14.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
13.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
13.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
13.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
11.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
11.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
10.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USP48 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
99.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
32.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
31.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
31.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
30.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
29.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
26.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
26.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
25.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
23.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
23.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
23.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
22.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
22.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
22.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
22.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
21.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
21.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
21.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
21.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
20.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
20.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
20.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
20.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
20.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
19.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
19.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
19.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
19.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
19.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
19.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
19.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
19.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
18.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
18.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
18.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
18.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
18.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
17.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
17.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
17.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
17.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
17.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
17.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
17.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
17.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
16.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
16.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
16.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
16.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
16.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
16.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
16.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
16.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
16.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
16.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
16.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
16.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
16.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
16.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
15.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
15.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
15.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
15.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
15.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
15.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
15.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
15.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
15.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
15.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
15.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
15.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
15.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
15.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
15.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
15.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
15.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
15.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
15.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
15.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
14.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
14.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
14.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
14.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
14.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
14.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
14.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
14.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
14.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
13.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
13.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
13.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
13.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
13.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
13.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
13.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
13.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
13.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
13.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
13.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
13.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
13.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
13.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
13.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
13.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
12.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
12.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
12.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
12.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
12.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
12.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
12.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
12.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
12.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
12.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
12.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
12.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
12.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
12.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
12.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
11.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
11.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
11.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
11.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
11.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
11.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
11.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
11.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
11.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
11.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
11.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
11.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
11.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
11.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
11.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
11.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
10.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
10.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
10.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
10.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
10.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
10.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
10.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
10.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
10.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
10.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
10.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
9.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
9.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
9.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
9.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
9.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
9.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
9.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
9.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
9.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
9.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
9.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
9.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
9.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
9.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
8.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
8.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
8.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
8.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
8.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
8.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
8.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
8.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
8.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
8.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
8.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
8.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
7.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
7.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
7.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
7.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
7.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
7.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
7.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
7.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
7.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
7.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
7.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
7.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
7.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
6.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
6.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
6.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
6.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
6.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
5.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
5.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
5.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
5.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
5.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
5.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
5.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
5.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
4.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
4.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
4.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
4.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
3.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
3.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
3.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
3.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
2.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
0.8
CPT0025290003
Tumor
0.6
CPT0001260009
Tumor
0.5
CPT0025170003
Tumor
0.5
CPT0088760003
Tumor
0.5
CPT0025580004
Tumor
0.5
CPT0006630003
Tumor
0.5
CPT0006440003
Tumor
0.5
CPT0077110003
Tumor
0.4
CPT0006900003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0088970003
Tumor
0.4
CPT0009000003
Tumor
0.4
CPT0079510001
Normal
0.4
CPT0077320001
Normal
0.4
CPT0026410003
Tumor
0.4
CPT0079230003
Tumor
0.3
CPT0012180003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0075130003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0065690003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0019130003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0014370004
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0088900003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0078830003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0019990003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0081990003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0001540009
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0075170001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0025920001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0078510003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0088500001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0019160001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0078800003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0086370003
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0078670001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0001510001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0069190001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0086890003
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0024670003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0014450004
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0081880003
Tumor
-0.1
CPT0025610001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0078840001
Normal
-0.2
CPT0088480003
Tumor
-0.2
CPT0015730003
Tumor
-0.2
CPT0007470001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0012280003
Tumor
-0.2
CPT0092800003
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0017410003
Tumor
-0.2
CPT0063630003
Tumor
-0.2
CPT0014350001
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0084560003
Tumor
-0.3
CPT0001180009
Tumor
-0.3
CPT0010110003
Tumor
-0.3
CPT0079180003
Tumor
-0.3
CPT0078660003
Tumor
-0.3
CPT0076350001
Normal
-0.3
CPT0009060003
Tumor
-0.3
CPT0012550003
Tumor
-0.4
CPT0002270011
Tumor
-0.4
CPT0023350003
Tumor
-0.4
CPT0007320003
Tumor
-0.5
CPT0076330003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
