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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LTBP4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
56.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
43.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
41.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
36.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
33.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
28.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
24.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
24.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
22.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
19.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
18.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
17.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
17.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
16.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
13.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
13.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
12.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
11.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
10.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
10.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
9.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
9.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
9.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
8.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
8.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
8.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
7.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
7.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
7.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
6.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
6.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
5.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
4.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
3.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
3.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
3.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
2.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
2.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
1.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
1.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LTBP4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
207.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
160.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
150.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
108.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
107.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
105.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
103.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
102.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
94.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
85.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
84.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
82.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
76.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
76.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
76.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
75.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
74.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
73.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
69.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
69.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
68.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
68.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
66.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
66.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
65.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
64.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
64.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
64.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
63.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
62.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
62.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
62.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
61.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
61.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
59.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
59.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
58.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
57.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
56.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
56.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
56.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
55.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
55.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
55.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
55.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
54.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
52.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
51.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
50.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
50.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
50.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
49.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
49.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
49.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
48.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
48.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
48.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
47.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
47.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
47.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
47.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
46.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
46.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
45.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
45.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
43.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
43.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
43.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
43.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
43.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
42.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
41.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
41.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
41.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
41.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
40.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
40.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
40.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
40.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
40.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
39.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
38.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
38.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
37.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
37.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
37.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
37.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
36.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
36.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
36.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
36.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
36.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
35.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
35.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
35.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
35.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
35.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
35.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
35.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
35.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
35.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
35.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
35.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
34.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
34.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
34.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
34.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
34.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
34.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
33.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
33.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
33.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
32.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
32.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
32.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
32.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
32.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
32.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
32.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
32.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
31.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
31.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
31.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
31.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
31.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
31.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
31.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
30.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
30.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
30.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
30.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
30.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
30.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
29.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
29.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
29.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
29.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
29.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
28.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
28.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
28.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
28.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
27.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
27.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
27.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
27.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
27.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
27.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
27.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
27.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
27.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
26.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
26.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
26.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
26.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
25.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
25.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
25.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
25.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
25.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
24.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
24.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
24.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
24.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
24.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
24.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
24.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
24.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
23.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
23.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
23.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
23.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
23.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
23.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
22.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
22.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
22.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
22.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
22.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
22.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
22.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
21.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
21.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
21.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
21.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
21.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
20.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
20.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
20.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
20.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
20.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
20.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
20.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
20.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
20.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
20.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
19.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
19.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
19.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
19.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
19.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
19.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
19.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
19.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
19.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
19.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
19.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
18.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
18.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
18.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
18.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
18.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
18.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
18.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
18.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
18.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
18.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
18.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
18.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
17.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
17.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
17.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
17.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
17.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
17.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
17.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
17.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
17.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
17.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
17.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
16.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
16.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
16.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
16.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
16.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
16.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
16.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
16.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
16.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
16.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
16.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
15.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
15.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
15.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
15.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
15.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
15.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
15.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
15.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
15.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
15.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
14.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
14.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
14.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
14.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
14.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
14.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
14.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
14.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
14.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
14.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
13.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
13.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
13.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
13.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
13.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
13.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
13.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
13.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
13.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
13.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
13.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
13.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
13.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
13.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
13.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
12.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
12.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
12.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
12.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
12.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
12.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
12.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
12.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
12.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
12.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
11.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
11.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
11.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
11.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
11.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
11.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
11.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
11.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
10.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
10.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
10.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
10.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
10.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
10.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
10.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
10.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
10.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
10.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
10.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
10.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
9.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
9.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
9.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
9.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
9.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
9.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
9.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
9.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
9.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
9.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
9.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
9.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
9.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
9.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
9.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
8.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
8.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
8.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
8.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
8.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
8.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
8.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
8.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
8.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
8.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
7.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
7.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
7.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
7.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
7.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
7.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
7.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
7.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
7.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
7.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
7.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
7.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
7.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
7.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
7.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
7.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
7.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
7.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
7.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
7.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
7.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
7.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
7.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
6.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
6.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
6.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
6.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
6.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
6.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
6.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
6.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
6.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
6.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
6.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
6.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
6.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
6.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
5.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
5.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
5.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
5.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
5.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
5.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
5.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
5.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
5.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
5.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
5.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
5.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
5.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
5.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
5.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
5.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
5.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
5.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
4.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
4.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
4.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
4.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
4.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
4.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
4.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
4.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
4.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
4.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
4.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
4.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
4.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
4.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
4.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
4.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
4.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
4.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
3.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
3.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
3.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
3.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
3.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
3.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
3.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
3.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
3.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
3.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
3.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
3.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
3.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
3.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
3.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
3.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
3.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
3.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
2.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
2.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
2.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
2.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
2.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
2.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
2.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
2.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
2.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
2.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
2.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
2.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
2.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
2.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
1.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
1.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
1.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
1.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
0.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LTBP4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
75.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
68.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
55.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
44.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
43.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
39.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
39.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
38.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
36.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
35.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
30.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
30.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
25.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
25.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
24.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
24.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
24.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
23.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
23.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
23.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
22.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
20.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
20.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
20.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
20.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
18.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
17.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
17.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
17.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
16.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
16.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
15.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
15.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
15.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
14.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
13.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
13.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
13.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
13.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
13.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
13.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
13.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
12.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
12.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
12.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
11.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
11.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
11.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
10.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
9.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
9.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
8.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
8.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
8.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
8.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
7.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
7.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
7.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
7.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
7.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
7.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
6.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
6.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
6.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
6.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
6.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
6.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
6.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
5.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
5.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
5.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
5.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
5.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
5.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
5.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
5.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
4.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
4.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
4.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
4.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
4.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
4.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
4.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
4.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
4.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
3.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
3.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
3.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
3.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
2.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
2.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
1.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
1.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LTBP4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
284.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
186.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
141.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
139.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
138.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
128.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
118.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
111.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
109.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
109.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
106.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
105.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
93.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
91.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
88.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
86.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
86.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
81.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
81.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
81.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
79.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
78.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
75.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
74.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
72.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
70.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
66.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
65.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
63.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
63.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
62.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
61.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
61.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
60.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
59.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
58.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
57.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
57.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
57.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
56.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
56.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
53.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
51.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
50.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
49.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
49.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
48.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
48.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
48.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
48.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
47.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
47.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
47.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
46.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
46.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
46.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
44.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
44.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
44.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
44.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
43.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
43.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
43.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
43.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
43.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
42.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
40.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
40.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
40.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
40.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
39.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
39.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
38.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
38.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
35.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
35.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
34.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
34.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
34.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
34.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
33.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
33.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
33.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
33.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
33.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
33.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
32.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
32.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
32.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
32.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
32.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
32.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
32.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
31.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
30.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
30.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
30.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
29.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
29.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
29.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
29.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
28.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
28.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
28.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
27.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
27.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
27.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
27.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
27.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
27.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
26.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
26.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
25.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
25.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
25.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
25.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
25.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
25.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
24.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
24.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
24.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
23.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
23.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
23.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
23.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
23.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
23.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
22.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
22.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
22.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
21.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
21.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
21.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
21.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
21.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
21.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
21.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
21.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
20.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
20.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
20.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
20.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
19.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
19.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
19.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
19.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
18.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
18.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
18.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
18.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
17.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
17.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
17.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
17.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
17.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
17.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
17.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
17.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
16.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
16.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
16.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
16.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
16.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
15.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
15.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
15.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
15.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
15.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
14.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
14.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
14.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
14.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
13.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
13.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
13.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
13.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
13.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
13.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
13.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
13.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
12.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
12.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
12.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
12.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
11.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
11.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
11.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
11.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
11.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
11.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
10.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
10.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
10.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
10.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
10.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
10.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
10.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
10.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
10.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
9.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
9.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
9.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
9.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
9.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
8.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
8.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
8.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
8.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
8.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
7.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
7.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
7.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
7.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
7.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
7.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
7.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
7.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
6.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
6.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
6.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
6.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
6.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
6.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
6.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
5.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
5.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
5.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
5.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
5.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
4.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
4.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
4.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
4.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
4.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
4.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
3.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
3.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
3.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
3.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
3.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
3.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
2.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
2.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
2.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
1.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011240003
Tumor
2.1
CPT0017850003
Tumor
1.7
CPT0084560003
Tumor
1.7
CPT0066480003
Tumor
1.5
CPT0001270001
Normal
1.5
CPT0086870003
Tumor
1.3
CPT0075720003
Tumor
1.3
CPT0069000003
Tumor
1.3
CPT0010120001
Normal
1.2
CPT0075170001
Normal
1.2
CPT0075130003
Tumor
1.2
CPT0092190003
Normal
1.1
CPT0012670003
Tumor
1.0
CPT0084590001
Normal
1.0
CPT0000660001
Normal
1.0
CPT0088900003
Tumor
0.9
CPT0081990003
Tumor
0.9
CPT0077320001
Normal
0.9
CPT0065430003
Tumor
0.9
CPT0014470001
Normal
0.9
CPT0088630003
Tumor
0.9
CPT0065870003
Tumor
0.8
CPT0015910003
Tumor
0.8
CPT0065820001
Normal
0.8
CPT0012080003
Tumor
0.8
CPT0085670003
Tumor
0.8
CPT0088480003
Tumor
0.8
CPT0088690003
Tumor
0.8
CPT0086970003
Normal
0.7
CPT0018250001
Normal
0.7
CPT0019130003
Tumor
0.7
CPT0063640001
Normal
0.7
CPT0001260009
Tumor
0.7
CPT0007320003
Tumor
0.7
CPT0014370004
Tumor
0.6
CPT0066520001
Normal
0.6
CPT0001180009
Tumor
0.5
CPT0063320003
Tumor
0.5
CPT0081600003
Tumor
0.5
CPT0079510001
Normal
0.5
CPT0000890001
Normal
0.5
CPT0025230003
Tumor
0.5
CPT0013790003
Normal
0.4
CPT0024680001
Normal
0.4
CPT0017450001
Normal
0.4
CPT0002370001
Normal
0.4
CPT0075570001
Normal
0.4
CPT0007470001
Normal
0.4
CPT0076330003
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0079230003
Tumor
0.3
CPT0020020001
Normal
0.3
CPT0001510001
Normal
0.3
CPT0078530001
Normal
0.3
CPT0010170001
Normal
0.3
CPT0023360001
Normal
0.2
CPT0089020003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0086830003
Normal
0.2
CPT0014130001
Normal
0.2
CPT0012290003
Normal
0.2
CPT0065930003
Tumor
0.2
CPT0001190001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0019160001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0009060003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0079300001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0014350001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0021240003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0012370003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0012280003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0006950001
Normal
-0.2
CPT0017410003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0079410003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0078660003
Tumor
-0.2
CPT0089480003
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0009080003
Normal
-0.3
CPT0000790001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0010160003
Tumor
-0.3
CPT0012770003
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0079480003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0079000001
Normal
-0.3
CPT0000780007
Tumor
-0.3
CPT0092740003
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0086030003
Tumor
-0.4
CPT0087040003
Tumor
-0.4
CPT0088920001
Normal
-0.4
CPT0078670001
Normal
-0.4
CPT0012640003
Normal
-0.4
CPT0006900003
Tumor
-0.5
CPT0025350003
Tumor
-0.5
CPT0023710001
Normal
-0.5
CPT0012900004
Tumor
-0.5
CPT0088640003
Normal
-0.5
CPT0019990003
Tumor
-0.5
CPT0092790003
Tumor
-0.6
CPT0065450001
Normal
-0.6
CPT0001220008
Tumor
-0.6
CPT0088780001
Normal
-0.6
CPT0020120003
Tumor
-0.6
CPT0025290003
Tumor
-0.6
CPT0065750003
Tumor
-0.6
CPT0065690003
Tumor
-0.7
CPT0069160003
Tumor
-0.7
CPT0077110003
Tumor
-0.7
CPT0001340003
Tumor
-0.7
CPT0086360003
Tumor
-0.8
CPT0000870016
Tumor
-0.9
CPT0079180003
Tumor
-0.9
CPT0023690003
Tumor
-0.9
CPT0071150004
Tumor
-0.9
CPT0014450004
Tumor
-1.0
CPT0064370003
Tumor
-1.0
CPT0002350011
Tumor
-1.0
CPT0088550004
Tumor
-1.0
CPT0002270011
Tumor
-1.0
CPT0078930003
Tumor
-1.0
CPT0007860003
Tumor
-1.0
CPT0089460004
Tumor
-1.0
CPT0078990003
Tumor
-1.0
CPT0078510003
Tumor
-1.1
CPT0023350003
Tumor
-1.1
CPT0086950003
Tumor
-1.1
CPT0009000003
Tumor
-1.2
CPT0014160003
Tumor
-1.2
CPT0066470004
Tumor
-1.2
CPT0006630003
Tumor
-1.2
CPT0001540009
Tumor
-1.2
CPT0012550003
Tumor
-1.4
CPT0006440003
Tumor
-1.4
CPT0081880003
Tumor
-1.4
CPT0012180003
Tumor
-1.4
CPT0092290003
Tumor
-1.4
CPT0001500009
Tumor
-1.4
CPT0015730003
Tumor
-1.4
CPT0011410003
Tumor
-1.4
CPT0079270003
Tumor
-1.5
CPT0024670003
Tumor
-1.5
CPT0088970003
Tumor
-1.7
CPT0026410003
Tumor
-1.7
CPT0025050003
Tumor
-1.8
CPT0078830003
Tumor
-1.8
CPT0065810003
Tumor
-2.0
CPT0078800003
Tumor
-2.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
