HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:5.0 nTPM
HPA Brain:33.5 nTPM
GTEx:5.0 nTPM
FANTOM5:21.4 Scaled Tags Per Million
Pig:15.7 nTPM
Mouse:17.8 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018856
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 33.5
Sample id Sample description nTPM
Hippocampus
nTPM: 32.4
2148 Female, age 91, left hemisphere 34.1
1911 Female, age 85, right hemisphere 33.5
1855 Male, age 76, left hemisphere 32.5
2529 Female, age 94, left hemisphere 32.0
2621 Female, age 67, right hemisphere 31.5
1898 Male, age 80, left hemisphere 30.8
Dentate gyrus
nTPM: 32.9
1927 Female, age 91, both hemispheres 37.9
2010 Male, age 76, both hemispheres 36.0
2530 Female, age 94, left hemisphere 32.3
2528 Male, age 74, both hemispheres 31.8
2246 Female, age 85, both hemispheres 29.8
2531 Female, age 67, both hemispheres 29.4
Entorhinal gyrus
nTPM: 32.2
2117 Female, age 91, right hemisphere 34.3
2764 Male, age 80, right hemisphere 33.6
1787 Male, age 76, left hemisphere 32.3
1938 Female, age 85, left hemisphere 31.7
2613 Female, age 94, left hemisphere 31.0
2686 Male, age 75, right hemisphere 30.1
Hippocampus, CA1
nTPM: 33.5
2749 Male, age 80, left hemisphere 37.6
2045 Male, age 76, both hemispheres 36.2
2082 Female, age 91, right hemisphere 31.7
2527 Male, age 74, both hemispheres 31.6
1873 Female, age 85, both hemispheres 30.2
Hippocampus, CA2
nTPM: 33.4
1963 Male, age 80, left hemisphere 38.2
1892 Male, age 76, both hemispheres 37.4
2113 Female, age 91, right hemisphere 32.9
1940 Female, age 85, left hemisphere 30.8
2437 Female, age 94, left hemisphere 30.6
2249 Male, age 74, both hemispheres 30.2
Hippocampus, CA3
nTPM: 32.6
1867 Male, age 76, both hemispheres 36.8
2137 Male, age 80, left hemisphere 36.7
2436 Male, age 74, both hemispheres 33.0
1891 Female, age 85, both hemispheres 31.9
2861 Female, age 67, both hemispheres 30.4
2620 Female, age 94, left hemisphere 26.6
Parahippocampal cortex
nTPM: 31.8
2018 Male, age 76, both hemispheres 36.5
2693 Female, age 94, both hemispheres 34.3
1933 Female, age 85, both hemispheres 32.9
1850 Male, age 80, both hemispheres 32.6
2250 Female, age 67, right hemisphere 31.9
2532 Female, age 72, left hemisphere 31.5
2245 Female, age 91, both hemispheres 30.9
1990 Female, age 91, right hemisphere 30.3
2692 Male, age 74, both hemispheres 29.2
2622 Female, age 67, right hemisphere 28.0
Perirhinal gyrus
nTPM: 32.1
1847 Female, age 91, left hemisphere 35.3
2521 Female, age 94, right hemisphere 32.3
1794 Male, age 80, right hemisphere 31.9
1841 Female, age 85, right hemisphere 31.9
2848 Male, age 76, right hemisphere 29.1
Subiculum
nTPM: 31.7
1977 Female, age 85, both hemispheres 34.0
2729 Female, age 91, right hemisphere 33.1
1901 Male, age 80, both hemispheres 33.0
2042 Male, age 76, both hemispheres 32.9
2438 Female, age 94, left hemisphere 30.3
2619 Male, age 74, both hemispheres 27.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 5.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.0
Samples: 197

Max nTPM: 10.3
Min nTPM: 2.5
Std nTPM: 1.2
Median nTPM: 4.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 10.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 8.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 8.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 8.2
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 7.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 7.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 7.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 7.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 7.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 7.5
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 7.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 21.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.4
FF:10153-102I9 76 years, female 24.2
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 15.7
Pig sample Sample description nTPM
Subiculum
nTPM: 13.9
Samples: 4

Max nTPM: 16.9
Min nTPM: 12.7
Sample A Female 16.9
Sample B Female 13.0
Sample C Male 12.7
Sample D Male 12.9
Dorsal hippocampus
nTPM: 15.7
Samples: 4

Max nTPM: 17.4
Min nTPM: 14.0
Sample A Female 17.4
Sample B Female 14.9
Sample C Male 16.6
Sample D Male 14.0
Entorhinal cortex
nTPM: 14.8
Samples: 4

Max nTPM: 15.8
Min nTPM: 14.3
Sample A Female 14.4
Sample B Female 15.8
Sample C Male 14.3
Sample D Male 14.5
Ventral hippocampus
nTPM: 14.4
Samples: 4

Max nTPM: 16.1
Min nTPM: 12.5
Sample A Female 15.9
Sample B Female 12.5
Sample C Male 13.1
Sample D Male 16.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 17.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.8
Samples: 4

Max nTPM: 19.6
Min nTPM: 16.3
Sample A Male 17.6
Sample B Male 19.6
Sample C Female 16.3
Sample D Female 17.8
Hippocampal formation
nTPM: 16.3
Samples: 4

Max nTPM: 17.4
Min nTPM: 14.6
Sample A Male 16.6
Sample B Male 16.7
Sample C Female 17.4
Sample D Female 14.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
69028671 Antisense, RP_050316_01_G07, Mouse strain C57BL/6J (56 days, male) 0.4

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