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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DHX32 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
37.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
32.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
28.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
22.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
22.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
17.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
17.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
17.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
17.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
16.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
16.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
16.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
15.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
15.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
15.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
15.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
14.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
13.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
13.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
13.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
13.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
13.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
12.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
12.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
12.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
12.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
11.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
11.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
11.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
11.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
11.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
11.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
11.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
11.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
11.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
10.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
10.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
10.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
10.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
10.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
10.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
10.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
10.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
10.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
10.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
10.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
10.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
10.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
9.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
9.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
9.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
9.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
9.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
9.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
9.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
9.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
9.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
9.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
9.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
9.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
9.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
9.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
9.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
9.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
9.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
9.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
9.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
9.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
9.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
9.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
9.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
9.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
9.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
9.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
8.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
8.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
8.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
8.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
8.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
8.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
8.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
8.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
8.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
8.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
8.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
8.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
8.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
8.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
8.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
8.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
7.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
7.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
7.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
7.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
7.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
7.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
7.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
7.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
7.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
7.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
7.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
7.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
7.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
7.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
7.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
7.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
7.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
7.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
7.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
7.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
7.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
7.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
7.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
7.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
7.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
7.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
7.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
7.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
7.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
6.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
6.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
6.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
6.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
6.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
6.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
6.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
6.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
6.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
6.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
6.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
6.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
6.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
6.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
6.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
6.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
6.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
6.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
6.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
6.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
6.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
6.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
6.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
6.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
6.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
6.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
6.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
6.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
6.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
6.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
6.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
5.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
5.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
5.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
5.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
5.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
5.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
5.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
5.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
5.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
5.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
5.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
5.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
5.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
5.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
5.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
5.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
5.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
5.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
5.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
5.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
5.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
5.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
5.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
5.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
5.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
5.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
5.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
5.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
5.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
5.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
4.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
4.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
4.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
4.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
4.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
4.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
4.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
4.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
4.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
4.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
4.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
4.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
4.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
4.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
4.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
4.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
4.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
4.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
4.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
4.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
4.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
4.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
4.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
4.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
4.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
4.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
4.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
4.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
4.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
4.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
4.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
4.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
4.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
4.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
4.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
4.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
4.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
3.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
3.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
3.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
3.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
3.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
3.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
3.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
3.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
3.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
3.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
3.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
3.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
3.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
3.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
3.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
3.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
3.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
3.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
3.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
3.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
3.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
3.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
3.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
3.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
3.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
3.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
3.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
3.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
3.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
2.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
2.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
2.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
2.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
2.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
2.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
2.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
2.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
2.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
2.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
2.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
2.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
2.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
2.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
2.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
2.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
2.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
2.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
2.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
1.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
1.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
1.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
1.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
1.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
1.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
1.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
1.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
0.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
0.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
0.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
0.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
0.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
0.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
0.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
0.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
0.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
0.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
0.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
0.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
0.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
0.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
0.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
0.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
0.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DHX32 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.5
Number of samples
231
Samples
Sample
Description
TPM
DO45209
0 years, male, NA, stage:4, alive, 1350 days
39.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
29.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
25.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
25.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
24.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
22.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
22.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
21.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
21.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
20.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
19.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
19.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
18.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
17.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
16.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
16.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
16.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
16.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
16.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
16.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
15.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
15.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
15.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
15.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
14.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
14.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
14.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
14.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
13.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
13.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
13.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
12.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
12.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
12.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
12.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
11.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
11.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
11.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
11.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
11.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
11.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
11.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
11.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
11.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
11.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
11.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
10.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
10.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
10.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
10.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
10.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
10.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
10.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
10.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
10.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
10.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
10.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
10.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
10.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
10.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
10.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
10.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
10.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
9.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
9.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
9.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
9.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
9.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
9.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
9.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
9.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
9.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
9.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
9.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
9.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
9.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
9.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
9.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
9.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
9.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
9.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
9.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
9.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
9.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
9.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
9.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
9.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
9.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
9.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
8.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
8.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
8.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
8.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
8.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
8.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
8.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
8.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
8.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
8.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
8.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
8.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
8.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
8.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
8.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
8.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
8.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
8.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
8.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
8.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
8.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
8.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
8.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
8.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
7.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
7.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
7.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
7.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
7.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
7.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
7.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
7.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
7.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
7.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
7.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
7.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
7.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
7.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
7.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
7.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
7.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
7.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
7.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
6.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
6.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
6.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
6.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
6.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
6.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
6.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
6.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
6.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
6.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
6.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
6.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
6.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
6.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
6.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
6.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
6.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
6.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
6.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
6.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
6.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
6.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
5.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
5.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
5.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
5.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
5.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
5.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
5.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
5.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
5.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
5.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
5.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
5.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
5.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
5.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
5.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
5.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
5.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
5.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
5.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
5.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
5.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
5.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
5.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
5.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
5.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
4.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
4.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
4.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
4.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
4.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
4.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
4.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
4.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
4.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
4.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
4.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
4.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
4.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
4.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
4.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
4.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
3.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
3.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
3.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
3.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
3.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
3.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
3.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
3.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
3.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
3.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
2.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
2.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
2.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
2.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
2.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
2.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
2.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
2.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
2.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
2.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
1.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
1.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
1.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
1.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
1.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
1.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
1.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
1.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
1.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
0.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
755
Tumor
1.4
135
Tumor
1.2
1025
Tumor
1.1
921
Tumor
0.9
858
Normal
0.9
745
Tumor
0.8
125
Tumor
0.7
147
Tumor
0.7
967
Tumor
0.6
388
Normal
0.6
823
Tumor
0.6
343
Tumor
0.6
923
Tumor
0.6
426
Normal
0.6
978
Normal
0.6
396
Normal
0.5
937
Tumor
0.5
368
Normal
0.5
514
Normal
0.5
428
Normal
0.5
1031
Tumor
0.5
394
Normal
0.5
424
Normal
0.5
392
Normal
0.5
955
Tumor
0.5
422
Normal
0.5
366
Normal
0.5
672
Normal
0.5
414
Normal
0.5
573
Tumor
0.5
113
Tumor
0.5
376
Normal
0.5
132
Normal
0.5
642
Normal
0.5
473
Tumor
0.5
127
Tumor
0.4
124
Normal
0.4
393
Tumor
0.4
618
Normal
0.4
882
Normal
0.4
111
Normal
0.4
187
Tumor
0.4
477
Tumor
0.4
957
Tumor
0.4
877
Tumor
0.4
186
Normal
0.4
363
Tumor
0.4
136
Normal
0.4
258
Normal
0.4
746
Normal
0.4
914
Normal
0.4
857
Tumor
0.4
227
Tumor
0.4
354
Normal
0.3
271
Tumor
0.3
232
Normal
0.3
327
Tumor
0.3
228
Normal
0.3
148
Normal
0.3
114
Normal
0.3
938
Normal
0.3
126
Normal
0.3
944
Normal
0.3
386
Normal
0.3
881
Tumor
0.3
421
Tumor
0.3
742
Normal
0.3
387
Tumor
0.3
778
Normal
0.3
146
Normal
0.3
648
Normal
0.3
128
Normal
0.3
743
Tumor
0.3
564
Normal
0.3
984
Normal
0.3
445
Tumor
0.3
616
Normal
0.3
715
Tumor
0.3
413
Tumor
0.3
952
Normal
0.3
423
Tumor
0.3
172
Normal
0.3
358
Normal
0.3
666
Normal
0.3
636
Normal
0.3
615
Tumor
0.3
816
Normal
0.3
112
Tumor
0.2
824
Normal
0.2
278
Normal
0.2
956
Normal
0.2
446
Normal
0.2
1014
Normal
0.2
534
Normal
0.2
384
Normal
0.2
756
Normal
0.2
262
Normal
0.2
138
Normal
0.2
298
Normal
0.2
344
Normal
0.2
982
Normal
0.2
432
Normal
0.2
162
Normal
0.2
1046
Normal
0.2
188
Normal
0.2
436
Normal
0.2
267
Tumor
0.2
331
Tumor
0.2
456
Normal
0.2
665
Tumor
0.2
212
Normal
0.2
924
Normal
0.2
257
Tumor
0.2
664
Normal
0.2
362
Normal
0.2
662
Normal
0.2
342
Normal
0.2
697
Tumor
0.2
818
Normal
0.2
224
Normal
0.2
443
Tumor
0.2
286
Normal
0.2
123
Tumor
0.2
851
Tumor
0.2
878
Normal
0.2
222
Normal
0.2
145
Tumor
0.2
1016
Normal
0.2
1026
Normal
0.2
1032
Normal
0.2
1022
Normal
0.1
526
Normal
0.1
517
Tumor
0.1
814
Normal
0.1
447
Tumor
0.1
884
Normal
0.1
332
Normal
0.1
721
Tumor
0.1
352
Normal
0.1
915
Tumor
0.1
272
Normal
0.1
647
Tumor
0.1
171
Tumor
0.1
635
Tumor
0.1
1021
Tumor
0.1
455
Tumor
0.1
786
Normal
0.1
554
Normal
0.1
954
Normal
0.1
464
Normal
0.1
538
Normal
0.1
546
Normal
0.1
698
Normal
0.1
516
Normal
0.1
628
Normal
0.1
976
Normal
0.1
467
Tumor
0.1
268
Normal
0.1
365
Tumor
0.1
926
Normal
0.1
572
Normal
0.1
357
Tumor
0.1
922
Normal
0.1
185
Tumor
0.1
558
Normal
0.1
1044
Normal
0.1
364
Normal
0.1
312
Normal
0.0
964
Normal
0.0
466
Normal
0.0
968
Normal
0.0
416
Normal
0.0
431
Tumor
0.0
925
Tumor
0.0
916
Normal
0.0
568
Normal
0.0
356
Normal
0.0
714
Normal
0.0
284
Normal
0.0
1043
Tumor
0.0
966
Normal
0.0
917
Tumor
0.0
314
Normal
0.0
131
Tumor
0.0
353
Tumor
0.0
723
Tumor
0.0
524
Normal
0.0
545
Tumor
0.0
451
Tumor
0.0
351
Tumor
0.0
142
Normal
0.0
918
Normal
0.0
722
Normal
0.0
412
Normal
0.0
513
Tumor
0.0
528
Normal
0.0
433
Tumor
0.0
141
Tumor
0.0
341
Tumor
0.0
963
Tumor
0.0
958
Normal
0.0
567
Tumor
0.0
448
Normal
0.0
671
Tumor
0.0
444
Normal
0.0
484
Normal
0.0
328
Normal
0.0
361
Tumor
0.0
385
Tumor
0.0
574
Normal
0.0
481
Tumor
0.0
434
Normal
0.0
452
Normal
0.0
874
Normal
-0.1
696
Normal
-0.1
695
Tumor
-0.1
535
Tumor
-0.1
518
Normal
-0.1
686
Normal
-0.1
728
Normal
-0.1
223
Tumor
-0.1
214
Normal
-0.1
196
Normal
-0.1
912
Normal
-0.1
261
Tumor
-0.1
411
Tumor
-0.1
533
Tumor
-0.1
965
Tumor
-0.1
738
Normal
-0.1
627
Tumor
-0.1
425
Tumor
-0.1
785
Tumor
-0.1
395
Tumor
-0.1
468
Normal
-0.1
953
Tumor
-0.1
716
Normal
-0.1
311
Tumor
-0.1
713
Tumor
-0.1
536
Normal
-0.1
218
Normal
-0.1
862
Normal
-0.1
435
Tumor
-0.1
866
Normal
-0.1
391
Tumor
-0.1
137
Tumor
-0.1
217
Tumor
-0.1
868
Normal
-0.1
1028
Normal
-0.1
815
Tumor
-0.2
883
Tumor
-0.2
864
Normal
-0.2
813
Tumor
-0.2
221
Tumor
-0.2
1042
Normal
-0.2
231
Tumor
-0.2
863
Tumor
-0.2
663
Tumor
-0.2
852
Normal
-0.2
283
Tumor
-0.2
494
Normal
-0.2
873
Tumor
-0.2
195
Tumor
-0.2
297
Tumor
-0.2
488
Normal
-0.2
777
Tumor
-0.2
313
Tumor
-0.2
724
Normal
-0.2
911
Tumor
-0.2
465
Tumor
-0.3
1045
Tumor
-0.3
498
Normal
-0.3
192
Normal
-0.3
861
Tumor
-0.3
161
Tumor
-0.3
474
Normal
-0.3
1015
Tumor
-0.3
617
Tumor
-0.3
741
Tumor
-0.3
355
Tumor
-0.3
191
Tumor
-0.3
367
Tumor
-0.4
482
Normal
-0.4
913
Tumor
-0.4
981
Tumor
-0.4
487
Tumor
-0.4
383
Tumor
-0.4
427
Tumor
-0.4
744
Normal
-0.4
537
Tumor
-0.4
975
Tumor
-0.4
415
Tumor
-0.4
983
Tumor
-0.4
977
Tumor
-0.5
817
Tumor
-0.5
213
Tumor
-0.5
943
Tumor
-0.5
492
Normal
-0.5
951
Tumor
-0.5
737
Tumor
-0.5
211
Tumor
-0.5
285
Tumor
-0.5
571
Tumor
-0.5
727
Tumor
-0.5
461
Tumor
-0.6
527
Tumor
-0.6
1041
Tumor
-0.6
491
Tumor
-0.6
375
Tumor
-0.6
563
Tumor
-0.7
462
Normal
-0.7
463
Tumor
-0.7
661
Tumor
-0.7
525
Tumor
-0.8
472
Normal
-0.8
515
Tumor
-0.8
478
Normal
-0.8
1013
Tumor
-0.9
641
Tumor
-0.9
553
Tumor
-1.1
493
Tumor
-1.1
497
Tumor
-1.2
483
Tumor
-1.2
471
Tumor
-1.2
867
Tumor
-1.2
523
Tumor
-1.2
685
Tumor
-1.3
557
Tumor
-1.4
1027
Tumor
-1.6
277
Tumor
-1.6
865
Tumor
-1.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
