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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GANAB is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
121.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
304.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
255.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
243.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
240.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
233.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
230.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
227.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
225.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
216.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
196.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
186.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
183.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
183.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
182.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
180.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
178.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
176.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
172.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
166.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
164.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
160.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
152.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
152.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
145.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
143.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
141.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
140.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
139.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
136.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
136.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
135.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
132.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
128.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
115.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
107.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
103.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
94.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
93.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
86.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
85.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
83.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
82.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
79.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
74.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
70.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
69.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
68.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
63.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
58.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
58.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
56.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
49.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
48.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
46.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
42.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
36.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
26.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
25.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
24.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
21.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GANAB is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
135.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
354.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
311.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
290.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
289.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
287.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
282.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
265.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
261.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
255.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
252.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
251.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
251.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
250.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
246.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
244.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
235.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
235.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
234.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
233.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
232.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
232.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
231.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
230.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
228.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
227.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
226.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
225.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
223.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
222.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
222.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
222.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
220.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
220.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
219.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
218.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
216.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
216.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
215.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
214.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
214.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
213.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
213.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
212.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
212.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
211.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
208.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
207.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
207.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
207.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
206.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
205.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
205.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
205.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
205.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
204.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
204.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
204.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
203.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
201.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
200.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
200.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
200.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
199.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
198.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
198.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
197.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
196.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
196.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
196.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
196.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
196.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
195.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
195.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
194.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
194.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
194.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
193.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
193.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
193.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
193.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
192.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
192.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
192.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
192.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
192.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
192.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
191.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
191.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
191.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
191.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
191.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
191.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
191.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
190.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
190.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
190.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
189.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
188.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
188.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
188.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
187.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
187.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
186.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
186.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
186.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
186.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
186.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
185.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
185.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
185.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
185.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
184.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
183.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
183.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
183.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
182.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
182.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
181.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
181.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
181.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
181.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
181.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
180.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
180.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
180.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
179.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
178.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
178.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
178.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
178.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
177.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
177.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
177.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
177.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
176.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
176.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
176.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
176.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
176.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
176.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
175.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
175.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
175.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
175.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
174.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
174.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
174.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
173.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
173.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
173.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
173.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
173.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
172.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
172.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
171.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
170.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
170.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
170.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
170.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
169.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
169.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
168.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
168.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
168.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
168.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
168.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
168.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
168.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
168.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
167.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
167.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
167.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
166.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
166.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
166.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
166.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
165.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
165.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
165.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
165.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
165.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
165.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
165.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
164.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
164.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
164.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
164.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
163.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
163.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
163.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
163.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
163.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
163.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
162.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
162.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
162.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
162.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
162.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
162.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
162.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
161.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
161.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
160.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
160.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
159.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
159.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
159.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
159.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
159.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
158.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
158.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
157.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
157.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
157.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
157.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
156.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
156.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
156.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
156.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
156.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
156.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
154.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
154.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
154.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
154.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
154.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
153.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
153.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
153.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
153.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
153.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
153.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
152.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
152.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
152.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
152.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
151.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
150.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
150.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
150.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
149.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
149.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
148.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
148.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
147.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
147.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
147.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
146.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
146.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
146.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
145.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
145.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
145.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
144.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
144.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
144.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
143.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
143.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
143.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
143.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
142.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
142.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
141.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
141.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
141.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
141.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
140.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
140.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
140.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
139.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
139.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
139.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
139.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
139.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
138.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
138.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
138.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
137.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
137.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
136.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
136.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
136.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
136.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
136.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
135.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
135.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
135.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
134.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
134.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
134.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
134.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
133.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
133.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
133.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
132.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
131.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
131.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
130.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
130.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
130.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
130.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
130.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
130.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
129.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
129.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
129.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
128.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
128.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
128.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
128.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
127.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
126.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
126.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
126.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
126.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
126.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
125.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
124.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
124.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
124.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
124.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
124.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
124.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
124.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
123.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
123.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
123.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
122.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
122.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
122.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
121.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
121.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
121.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
120.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
120.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
119.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
119.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
119.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
119.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
118.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
118.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
117.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
117.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
117.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
117.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
116.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
116.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
115.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
115.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
115.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
114.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
114.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
114.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
114.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
114.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
113.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
113.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
112.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
111.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
111.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
111.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
111.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
111.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
110.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
110.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
110.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
110.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
110.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
109.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
109.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
108.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
107.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
107.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
106.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
106.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
106.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
106.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
105.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
104.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
104.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
103.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
103.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
103.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
102.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
100.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
98.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
96.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
96.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
96.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
96.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
94.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
94.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
93.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
93.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
92.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
91.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
90.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
90.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
89.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
89.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
89.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
87.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
86.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
86.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
85.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
85.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
85.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
84.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
84.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
83.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
82.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
82.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
81.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
79.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
78.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
77.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
77.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
76.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
75.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
75.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
75.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
74.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
72.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
71.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
71.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
71.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
71.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
70.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
69.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
68.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
68.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
67.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
66.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
65.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
65.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
64.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
62.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
60.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
60.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
59.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
58.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
57.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
57.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
55.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
55.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
55.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
54.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
54.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
52.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
51.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
51.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
51.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
50.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
46.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
46.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
44.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
44.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
43.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
43.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
42.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
42.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
41.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
41.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
40.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
40.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
39.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
39.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
39.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
37.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
36.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
35.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
35.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
34.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
33.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
32.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
32.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
31.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
31.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
30.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
30.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
29.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
29.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
28.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
28.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
25.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
25.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
23.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
23.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
23.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
23.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
23.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
22.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
21.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
20.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
19.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
19.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
19.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
19.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
18.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
18.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
17.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
17.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
16.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
16.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
15.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
15.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
14.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
13.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
13.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
10.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
9.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
9.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GANAB is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
136.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
304.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
295.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
224.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
208.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
198.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
196.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
192.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
191.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
189.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
187.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
177.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
176.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
174.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
173.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
172.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
171.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
169.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
167.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
164.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
160.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
160.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
159.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
157.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
156.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
155.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
155.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
154.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
151.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
150.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
149.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
148.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
147.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
147.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
147.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
147.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
146.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
143.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
143.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
142.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
142.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
140.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
139.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
138.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
137.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
136.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
136.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
136.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
135.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
135.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
135.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
134.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
134.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
134.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
134.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
133.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
133.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
133.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
133.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
132.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
129.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
128.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
127.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
127.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
127.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
125.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
124.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
123.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
123.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
122.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
119.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
119.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
118.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
116.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
116.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
115.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
113.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
112.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
111.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
110.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
110.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
107.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
107.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
106.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
105.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
104.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
102.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
97.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
94.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
90.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
84.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
83.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
83.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
78.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
76.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
67.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
61.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
60.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
56.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
42.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GANAB is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
96.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
310.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
303.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
290.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
284.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
272.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
271.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
270.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
256.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
255.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
246.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
239.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
239.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
232.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
231.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
229.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
223.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
222.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
216.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
214.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
213.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
204.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
202.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
201.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
200.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
197.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
197.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
193.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
192.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
191.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
190.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
187.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
187.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
186.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
186.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
185.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
184.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
178.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
177.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
177.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
176.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
175.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
173.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
173.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
172.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
171.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
171.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
170.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
167.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
167.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
166.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
163.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
163.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
160.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
160.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
159.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
159.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
158.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
157.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
156.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
154.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
154.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
152.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
150.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
147.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
146.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
146.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
146.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
145.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
145.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
142.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
140.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
140.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
139.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
139.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
135.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
135.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
134.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
134.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
133.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
133.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
132.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
131.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
130.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
130.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
130.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
130.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
130.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
129.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
127.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
127.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
126.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
126.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
125.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
124.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
122.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
122.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
121.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
120.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
120.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
118.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
116.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
116.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
116.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
116.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
115.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
114.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
114.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
113.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
113.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
112.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
111.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
109.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
108.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
107.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
107.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
106.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
105.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
105.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
104.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
104.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
103.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
103.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
103.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
102.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
101.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
101.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
99.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
99.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
98.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
98.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
98.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
96.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
95.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
95.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
94.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
93.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
92.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
91.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
90.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
90.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
89.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
89.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
88.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
87.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
87.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
87.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
85.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
85.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
84.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
84.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
83.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
83.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
80.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
79.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
77.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
77.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
76.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
75.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
75.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
74.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
74.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
74.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
73.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
72.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
72.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
71.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
70.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
67.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
66.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
65.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
65.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
64.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
64.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
63.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
62.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
62.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
62.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
61.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
61.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
60.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
60.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
60.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
59.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
56.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
54.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
53.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
52.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
52.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
52.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
52.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
51.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
51.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
50.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
50.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
49.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
47.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
46.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
46.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
44.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
44.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
42.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
41.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
41.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
40.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
40.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
39.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
38.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
38.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
36.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
35.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
35.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
35.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
35.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
33.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
32.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
32.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
32.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
31.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
31.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
29.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
28.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
28.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
28.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
27.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
26.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
26.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
25.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
25.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
24.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
23.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
23.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
22.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
22.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
21.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
21.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
20.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
20.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
19.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
17.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
13.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
13.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
12.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
11.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
11.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
10.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
10.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
9.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
9.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
8.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
6.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
4.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
2.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0025110003
Tumor
1.2
CPT0001340003
Tumor
1.1
CPT0079270003
Tumor
1.0
CPT0076330003
Tumor
0.9
CPT0002350011
Tumor
0.8
CPT0086950003
Tumor
0.7
CPT0081880003
Tumor
0.6
CPT0015730003
Tumor
0.5
CPT0025290003
Tumor
0.4
CPT0023350003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0084560003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0063630003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0012180003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0001500009
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0000890001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0089480003
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0012080003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0092310003
Normal
0.0
CPT0066520001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0092190003
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0002270011
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0017850003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0088920001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0025350003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0012550003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0063330001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0065870003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0079180003
Tumor
-0.2
CPT0025920001
Normal
-0.2
CPT0078660003
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0017410003
Tumor
-0.2
CPT0071150004
Tumor
-0.2
CPT0088640003
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0001540009
Tumor
-0.2
CPT0012640003
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0009020003
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0009080003
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0078530001
Normal
-0.4
CPT0000870016
Tumor
-0.4
CPT0088970003
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
