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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGBP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
85.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
77.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
75.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
73.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
73.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
65.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
65.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
65.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
60.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
60.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
57.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
56.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
55.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
55.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
54.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
53.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
52.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
50.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
50.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
49.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
49.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
46.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
45.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
44.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
43.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
42.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
42.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
41.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
40.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
40.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
40.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
40.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
39.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
38.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
38.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
38.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
37.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
37.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
37.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
36.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
36.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
35.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
34.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
34.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
33.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
31.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
31.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
31.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
30.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
30.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
30.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
29.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
27.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
26.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
26.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
26.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
24.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
24.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
24.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
24.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
22.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
22.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
20.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGBP1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
76.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
241.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
199.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
179.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
165.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
163.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
163.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
163.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
161.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
154.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
147.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
143.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
143.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
141.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
140.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
137.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
137.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
137.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
136.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
136.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
135.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
135.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
134.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
133.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
133.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
132.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
126.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
126.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
126.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
126.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
125.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
125.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
124.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
124.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
122.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
122.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
121.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
121.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
121.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
121.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
120.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
119.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
118.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
117.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
117.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
117.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
116.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
116.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
116.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
116.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
116.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
116.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
115.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
115.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
115.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
115.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
114.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
114.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
114.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
113.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
112.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
112.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
112.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
112.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
112.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
112.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
111.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
111.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
109.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
108.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
107.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
107.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
107.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
107.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
106.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
106.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
106.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
106.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
105.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
105.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
105.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
105.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
105.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
104.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
103.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
103.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
103.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
103.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
103.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
103.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
102.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
102.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
102.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
101.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
101.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
100.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
100.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
100.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
100.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
100.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
99.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
99.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
99.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
99.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
99.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
99.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
99.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
99.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
99.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
98.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
98.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
98.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
97.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
97.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
97.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
96.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
96.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
96.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
96.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
96.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
96.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
96.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
95.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
95.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
95.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
95.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
95.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
95.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
94.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
94.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
94.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
94.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
94.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
93.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
93.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
93.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
93.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
93.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
93.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
93.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
93.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
92.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
92.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
92.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
92.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
91.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
91.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
91.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
91.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
91.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
91.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
90.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
90.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
90.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
90.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
90.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
90.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
90.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
90.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
90.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
90.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
90.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
89.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
89.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
89.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
89.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
89.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
88.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
88.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
88.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
88.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
88.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
88.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
88.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
87.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
87.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
87.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
87.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
87.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
87.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
87.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
86.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
86.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
86.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
86.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
86.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
86.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
86.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
85.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
85.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
85.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
85.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
85.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
85.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
85.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
84.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
84.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
84.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
84.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
84.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
83.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
83.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
83.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
83.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
83.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
83.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
83.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
82.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
82.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
82.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
82.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
82.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
82.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
82.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
81.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
81.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
81.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
81.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
80.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
80.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
80.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
80.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
80.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
80.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
80.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
80.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
80.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
80.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
80.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
80.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
79.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
79.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
79.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
79.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
79.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
79.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
79.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
79.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
78.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
78.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
78.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
78.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
78.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
78.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
78.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
77.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
77.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
77.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
76.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
76.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
76.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
76.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
76.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
76.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
76.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
75.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
75.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
74.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
74.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
74.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
74.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
74.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
74.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
73.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
73.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
73.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
73.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
73.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
73.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
73.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
72.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
72.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
72.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
72.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
72.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
72.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
71.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
71.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
71.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
71.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
71.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
70.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
70.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
70.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
70.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
70.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
70.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
70.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
70.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
70.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
70.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
70.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
69.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
69.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
68.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
68.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
68.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
68.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
68.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
68.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
67.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
67.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
67.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
67.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
67.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
67.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
67.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
67.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
67.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
67.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
66.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
66.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
66.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
66.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
66.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
66.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
66.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
66.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
66.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
65.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
65.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
65.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
65.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
65.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
65.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
65.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
65.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
65.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
65.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
64.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
64.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
64.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
64.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
63.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
63.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
63.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
63.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
63.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
63.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
63.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
63.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
63.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
62.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
62.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
62.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
62.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
62.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
62.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
62.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
62.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
62.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
62.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
61.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
61.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
61.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
61.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
61.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
61.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
61.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
60.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
60.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
60.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
60.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
60.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
60.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
60.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
60.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
59.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
59.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
59.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
59.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
59.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
59.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
59.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
59.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
59.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
59.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
59.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
58.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
58.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
58.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
58.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
57.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
57.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
57.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
57.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
57.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
56.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
56.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
56.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
56.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
55.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
55.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
55.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
55.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
55.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
55.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
55.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
54.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
54.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
54.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
54.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
54.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
54.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
54.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
54.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
54.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
53.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
53.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
53.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
53.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
53.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
53.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
53.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
53.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
53.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
53.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
52.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
52.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
52.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
52.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
51.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
51.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
51.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
51.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
51.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
50.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
50.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
50.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
49.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
49.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
49.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
49.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
48.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
48.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
47.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
46.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
45.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
45.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
45.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
45.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
45.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
45.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
45.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
45.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
44.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
44.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
44.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
44.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
44.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
44.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
44.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
43.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
43.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
43.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
43.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
43.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
43.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
42.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
41.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
40.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
40.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
40.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
40.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
39.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
39.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
39.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
38.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
38.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
38.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
37.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
37.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
37.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
37.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
37.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
37.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
36.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
36.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
36.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
36.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
36.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
36.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
35.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
35.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
35.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
35.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
34.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
33.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
32.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
32.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
32.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
31.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
31.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
31.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
31.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
31.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
31.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
31.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
31.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
30.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
30.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
29.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
29.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
29.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
29.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
29.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
28.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
28.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
27.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
27.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
26.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
25.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
25.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
24.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
24.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
24.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
23.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
20.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
18.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
18.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
14.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGBP1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
76.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
164.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
154.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
141.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
141.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
140.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
126.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
117.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
117.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
115.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
111.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
110.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
110.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
108.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
108.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
105.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
105.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
103.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
101.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
97.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
96.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
96.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
95.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
93.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
93.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
91.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
90.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
88.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
88.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
87.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
86.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
86.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
86.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
85.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
85.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
82.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
82.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
81.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
81.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
80.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
80.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
79.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
79.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
79.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
78.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
78.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
78.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
78.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
78.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
78.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
78.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
76.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
76.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
72.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
72.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
71.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
71.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
70.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
69.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
68.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
68.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
67.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
67.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
67.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
67.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
63.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
62.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
62.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
61.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
60.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
60.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
60.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
58.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
58.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
57.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
57.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
56.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
56.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
54.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
54.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
53.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
51.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
50.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
49.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
49.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
49.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
48.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
48.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
47.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
46.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
46.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
46.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
41.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
40.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
40.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
39.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
39.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
35.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
31.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
30.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGBP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
122.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
112.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
93.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
91.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
90.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
88.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
86.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
84.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
84.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
83.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
79.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
76.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
76.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
75.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
74.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
73.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
72.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
71.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
71.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
69.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
68.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
67.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
67.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
66.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
65.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
65.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
64.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
62.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
62.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
59.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
59.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
59.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
58.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
58.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
58.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
57.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
57.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
57.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
56.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
56.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
56.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
56.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
55.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
55.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
55.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
54.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
54.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
54.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
54.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
53.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
52.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
52.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
51.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
51.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
51.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
51.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
51.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
50.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
50.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
50.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
50.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
50.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
50.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
50.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
50.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
49.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
49.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
49.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
49.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
48.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
48.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
48.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
48.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
48.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
48.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
48.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
48.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
48.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
48.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
48.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
48.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
47.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
47.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
47.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
47.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
47.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
46.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
46.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
46.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
46.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
46.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
46.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
46.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
45.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
45.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
45.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
45.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
44.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
44.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
44.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
44.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
44.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
44.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
44.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
44.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
43.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
43.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
43.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
43.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
42.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
42.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
42.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
42.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
42.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
41.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
41.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
41.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
41.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
41.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
41.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
41.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
40.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
40.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
40.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
40.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
40.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
40.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
40.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
40.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
40.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
40.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
39.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
39.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
39.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
39.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
38.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
38.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
38.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
38.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
38.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
38.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
38.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
38.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
38.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
37.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
37.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
37.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
37.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
37.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
37.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
37.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
37.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
37.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
37.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
37.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
37.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
36.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
36.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
36.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
36.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
36.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
36.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
36.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
36.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
36.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
35.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
35.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
35.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
35.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
35.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
35.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
35.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
35.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
34.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
34.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
34.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
34.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
34.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
34.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
34.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
34.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
34.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
34.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
34.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
34.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
33.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
33.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
32.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
32.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
32.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
32.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
32.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
32.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
32.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
32.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
32.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
32.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
32.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
31.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
31.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
31.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
31.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
31.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
31.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
31.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
31.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
31.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
31.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
31.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
31.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
31.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
30.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
30.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
30.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
30.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
30.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
29.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
29.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
29.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
29.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
29.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
29.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
29.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
29.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
29.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
28.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
28.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
28.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
28.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
28.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
28.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
27.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
27.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
27.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
27.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
27.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
27.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
26.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
26.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
26.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
26.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
26.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
25.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
25.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
25.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
25.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
25.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
25.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
25.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
24.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
24.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
24.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
23.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
23.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
23.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
23.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
23.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
23.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
23.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
23.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
22.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
22.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
22.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
21.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
20.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
20.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
19.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
19.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
19.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
18.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
17.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
17.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
17.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
16.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
15.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
14.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
13.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
11.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
9.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
0.7
CPT0069160003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0009060003
Tumor
0.4
CPT0078660003
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0089460004
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0001180009
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0077110003
Tumor
0.4
CPT0086950003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0088550004
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0014160003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0078530001
Normal
0.3
CPT0025290003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0065690003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0076350001
Normal
0.2
CPT0088970003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0018250001
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0012180003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0025050003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0078510003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0078940001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0002350011
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0078830003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0079410003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0065450001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0012770003
Normal
0.0
CPT0075570001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0011240003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0023710001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0023360001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0014470001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0092800003
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0082010001
Normal
0.0
CPT0012290003
Normal
-0.1
CPT0085670003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0077310003
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0075720003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0025110003
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0017850003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0078670001
Normal
-0.2
CPT0019130003
Tumor
-0.2
CPT0069190001
Normal
-0.3
CPT0063630003
Tumor
-0.3
CPT0011410003
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
