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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PEBP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
657.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
1827.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
1655.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
1590.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
1450.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
1436.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
1426.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
1256.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
1177.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
1153.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
1091.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
976.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
954.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
942.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
915.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
793.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
786.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
767.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
749.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
658.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
644.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
629.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
625.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
617.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
573.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
573.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
572.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
569.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
567.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
566.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
559.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
527.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
525.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
517.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
515.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
511.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
507.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
506.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
501.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
494.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
486.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
479.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
470.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
468.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
456.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
452.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
451.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
450.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
439.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
431.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
430.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
423.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
421.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
409.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
385.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
344.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
332.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
331.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
324.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
306.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
245.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
234.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
232.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
197.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PEBP1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
460.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
1300.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
1275.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
1271.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
1261.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
1256.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
1208.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
1075.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
991.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
983.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
939.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
924.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
904.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
895.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
884.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
882.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
856.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
856.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
850.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
847.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
843.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
827.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
826.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
812.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
811.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
810.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
796.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
792.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
791.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
783.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
782.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
779.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
779.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
774.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
770.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
767.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
765.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
756.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
752.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
751.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
747.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
744.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
743.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
742.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
734.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
734.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
733.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
728.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
726.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
725.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
724.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
720.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
715.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
714.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
711.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
709.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
709.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
708.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
707.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
707.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
707.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
706.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
704.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
704.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
701.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
693.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
691.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
688.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
680.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
676.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
673.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
670.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
670.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
666.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
658.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
655.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
653.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
649.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
647.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
642.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
641.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
638.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
637.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
635.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
632.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
632.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
630.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
628.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
627.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
627.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
626.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
623.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
622.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
620.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
620.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
619.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
618.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
615.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
614.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
613.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
613.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
610.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
608.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
606.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
604.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
604.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
603.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
602.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
602.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
600.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
598.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
595.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
593.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
593.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
592.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
592.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
588.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
588.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
585.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
584.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
584.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
584.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
581.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
580.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
579.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
577.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
574.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
573.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
573.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
570.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
569.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
569.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
568.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
568.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
566.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
565.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
565.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
564.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
563.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
563.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
561.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
561.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
561.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
558.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
557.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
556.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
552.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
552.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
551.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
551.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
548.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
545.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
545.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
544.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
542.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
539.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
537.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
537.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
536.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
535.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
531.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
531.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
530.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
528.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
528.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
524.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
522.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
520.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
520.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
519.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
519.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
517.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
517.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
517.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
516.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
515.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
514.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
513.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
512.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
512.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
512.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
511.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
511.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
511.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
510.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
509.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
509.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
509.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
508.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
507.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
507.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
504.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
502.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
501.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
500.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
497.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
494.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
493.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
493.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
492.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
491.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
490.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
489.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
488.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
486.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
485.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
485.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
484.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
483.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
482.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
482.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
482.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
482.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
479.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
479.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
477.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
476.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
476.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
475.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
473.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
472.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
472.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
470.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
470.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
469.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
468.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
467.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
467.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
467.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
465.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
465.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
465.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
464.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
464.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
463.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
462.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
462.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
462.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
461.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
461.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
461.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
461.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
459.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
459.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
458.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
456.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
455.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
454.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
454.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
452.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
449.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
448.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
446.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
444.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
444.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
443.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
442.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
440.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
440.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
440.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
439.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
438.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
438.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
436.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
436.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
436.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
436.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
435.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
434.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
434.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
434.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
431.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
430.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
429.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
428.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
428.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
427.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
426.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
425.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
425.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
425.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
424.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
424.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
424.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
423.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
422.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
422.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
422.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
421.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
417.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
417.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
417.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
416.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
415.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
415.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
411.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
407.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
406.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
406.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
406.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
405.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
405.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
405.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
405.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
403.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
403.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
403.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
402.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
401.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
400.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
399.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
399.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
398.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
397.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
397.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
395.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
394.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
394.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
392.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
392.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
391.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
390.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
388.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
388.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
387.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
386.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
382.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
382.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
382.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
382.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
381.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
381.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
381.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
378.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
378.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
378.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
376.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
376.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
375.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
373.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
373.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
373.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
372.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
372.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
371.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
371.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
371.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
371.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
370.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
369.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
368.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
368.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
365.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
365.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
365.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
365.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
363.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
361.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
356.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
355.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
354.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
352.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
352.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
350.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
348.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
348.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
348.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
348.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
346.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
342.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
342.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
342.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
341.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
340.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
340.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
340.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
340.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
339.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
338.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
334.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
333.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
332.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
331.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
330.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
329.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
327.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
327.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
326.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
326.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
324.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
323.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
319.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
319.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
319.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
319.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
319.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
318.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
317.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
317.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
317.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
316.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
315.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
314.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
314.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
314.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
314.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
312.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
306.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
304.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
304.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
300.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
299.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
299.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
298.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
297.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
295.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
294.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
292.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
290.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
285.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
285.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
285.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
284.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
281.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
281.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
280.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
277.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
276.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
274.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
273.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
269.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
265.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
265.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
264.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
262.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
261.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
260.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
259.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
259.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
255.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
253.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
253.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
253.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
252.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
251.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
251.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
250.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
250.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
250.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
249.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
249.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
249.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
249.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
248.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
247.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
247.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
246.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
245.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
244.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
243.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
241.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
241.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
239.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
239.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
237.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
237.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
236.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
235.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
233.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
229.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
224.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
221.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
220.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
219.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
217.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
215.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
214.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
208.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
207.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
207.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
204.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
203.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
203.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
203.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
200.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
199.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
199.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
196.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
193.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
193.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
191.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
187.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
186.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
184.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
184.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
183.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
176.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
175.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
174.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
173.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
173.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
173.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
167.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
165.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
162.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
161.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
159.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
158.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
155.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
154.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
148.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
146.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
146.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
144.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
141.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
132.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
132.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
113.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
111.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
105.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
99.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PEBP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
474.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
1196.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
1068.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
827.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
800.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
782.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
773.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
763.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
756.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
737.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
727.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
726.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
712.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
701.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
693.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
683.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
679.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
675.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
671.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
671.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
670.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
663.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
631.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
631.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
610.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
607.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
605.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
604.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
594.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
593.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
592.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
575.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
561.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
551.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
541.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
538.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
528.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
528.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
527.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
525.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
516.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
512.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
512.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
511.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
498.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
483.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
475.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
469.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
466.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
460.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
444.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
439.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
433.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
424.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
421.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
412.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
407.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
407.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
407.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
407.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
401.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
375.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
370.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
367.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
367.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
354.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
346.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
345.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
345.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
344.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
343.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
343.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
341.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
339.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
335.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
333.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
324.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
324.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
323.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
322.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
320.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
318.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
316.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
309.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
298.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
296.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
294.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
260.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
254.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
248.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
245.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
241.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
239.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
232.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
207.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
186.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
178.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
171.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
157.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PEBP1 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
709.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2752.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
2518.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
2153.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
1840.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
1839.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
1831.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
1812.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
1798.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
1796.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
1756.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
1704.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
1677.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
1646.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
1632.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
1624.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
1580.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
1565.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1541.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
1515.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
1511.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
1472.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
1432.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
1429.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
1415.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
1346.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
1345.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
1335.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
1329.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
1302.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
1279.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
1253.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
1240.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
1211.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
1199.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
1197.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
1197.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
1144.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
1138.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
1137.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1110.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
1106.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
1102.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
1098.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
1065.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
1061.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
1050.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
1041.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
1029.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
1011.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
1010.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
1000.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
994.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
989.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
985.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
974.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
971.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
963.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
963.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
959.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
950.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
949.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
944.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
941.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
933.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
925.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
921.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
917.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
870.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
867.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
865.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
860.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
855.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
849.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
848.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
837.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
831.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
825.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
818.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
797.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
794.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
788.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
776.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
768.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
767.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
764.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
761.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
761.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
756.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
755.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
755.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
754.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
749.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
741.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
741.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
734.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
727.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
725.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
716.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
715.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
713.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
700.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
697.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
697.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
693.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
686.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
686.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
683.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
677.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
673.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
666.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
662.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
661.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
658.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
657.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
656.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
655.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
647.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
646.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
645.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
643.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
639.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
634.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
631.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
626.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
625.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
618.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
618.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
617.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
612.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
611.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
611.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
611.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
605.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
601.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
599.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
598.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
596.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
593.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
587.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
587.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
584.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
584.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
584.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
583.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
583.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
580.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
577.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
576.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
576.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
573.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
572.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
571.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
569.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
568.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
568.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
564.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
564.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
563.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
563.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
562.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
560.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
549.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
547.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
547.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
546.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
541.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
539.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
538.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
536.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
536.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
535.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
535.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
525.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
524.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
524.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
522.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
519.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
514.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
514.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
511.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
500.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
500.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
500.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
498.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
495.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
495.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
494.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
489.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
487.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
486.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
486.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
476.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
475.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
474.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
474.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
473.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
472.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
469.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
468.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
467.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
461.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
460.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
458.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
457.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
454.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
452.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
450.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
445.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
445.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
443.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
439.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
437.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
433.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
426.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
424.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
423.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
417.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
417.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
415.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
415.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
413.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
412.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
412.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
411.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
410.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
408.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
403.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
402.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
398.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
396.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
389.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
389.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
386.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
384.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
378.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
375.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
374.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
371.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
367.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
365.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
363.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
362.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
356.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
353.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
352.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
345.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
339.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
335.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
334.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
333.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
332.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
331.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
329.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
323.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
318.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
316.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
313.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
310.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
306.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
296.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
295.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
293.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
293.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
284.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
277.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
271.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
267.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
253.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
247.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
240.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
230.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
222.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
219.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
208.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
206.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
203.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
195.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
191.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
186.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
183.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
160.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
143.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012900004
Tumor
0.8
CPT0009080003
Normal
0.7
CPT0069010001
Normal
0.6
CPT0012640003
Normal
0.6
CPT0077500001
Normal
0.6
CPT0078530001
Normal
0.5
CPT0009020003
Normal
0.5
CPT0012090003
Normal
0.5
CPT0065450001
Normal
0.5
CPT0077140001
Normal
0.5
CPT0023710001
Normal
0.5
CPT0026420001
Normal
0.5
CPT0020130001
Normal
0.5
CPT0025920001
Normal
0.5
CPT0078670001
Normal
0.5
CPT0089480003
Normal
0.5
CPT0081620001
Normal
0.5
CPT0001230001
Normal
0.5
CPT0012770003
Normal
0.4
CPT0014350001
Normal
0.4
CPT0092800003
Normal
0.4
CPT0082010001
Normal
0.4
CPT0078940001
Normal
0.4
CPT0002270011
Tumor
0.4
CPT0088920001
Normal
0.4
CPT0024680001
Normal
0.4
CPT0012570003
Normal
0.4
CPT0076350001
Normal
0.4
CPT0023360001
Normal
0.4
CPT0025610001
Normal
0.4
CPT0007470001
Normal
0.4
CPT0079510001
Normal
0.4
CPT0010170001
Normal
0.4
CPT0007870001
Normal
0.4
CPT0000790001
Normal
0.4
CPT0086890003
Normal
0.4
CPT0078840001
Normal
0.4
CPT0019160001
Normal
0.4
CPT0010160003
Tumor
0.4
CPT0079430001
Normal
0.3
CPT0018250001
Normal
0.3
CPT0079000001
Normal
0.3
CPT0064400001
Normal
0.3
CPT0006950001
Normal
0.3
CPT0066430001
Normal
0.3
CPT0013790003
Normal
0.3
CPT0088970003
Tumor
0.3
CPT0001550001
Normal
0.3
CPT0086370003
Normal
0.3
CPT0079180003
Tumor
0.3
CPT0075570001
Normal
0.3
CPT0012920003
Normal
0.3
CPT0088640003
Normal
0.3
CPT0088780001
Normal
0.3
CPT0006730001
Normal
0.3
CPT0020020001
Normal
0.3
CPT0079300001
Normal
0.3
CPT0025060001
Normal
0.3
CPT0092740003
Normal
0.2
CPT0001510001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0092310003
Normal
0.2
CPT0002370001
Normal
0.2
CPT0063330001
Normal
0.2
CPT0000890001
Normal
0.2
CPT0079480003
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0024670003
Tumor
0.2
CPT0086970003
Normal
0.2
CPT0017450001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0000780007
Tumor
0.2
CPT0088710001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0089040001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0019990003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0065820001
Normal
-0.1
CPT0079270003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0014450004
Tumor
-0.1
CPT0006530001
Normal
-0.2
CPT0009060003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0001500009
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0007320003
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0078930003
Tumor
-0.3
CPT0017410003
Tumor
-0.3
CPT0075170001
Normal
-0.3
CPT0025170003
Tumor
-0.3
CPT0078800003
Tumor
-0.3
CPT0001540009
Tumor
-0.3
CPT0019130003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0081990003
Tumor
-0.3
CPT0001220008
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0012550003
Tumor
-0.4
CPT0014160003
Tumor
-0.4
CPT0065430003
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0021240003
Tumor
-0.4
CPT0023690003
Tumor
-0.4
CPT0015730003
Tumor
-0.4
CPT0001270001
Normal
-0.4
CPT0079410003
Tumor
-0.4
CPT0087040003
Tumor
-0.4
CPT0078660003
Tumor
-0.4
CPT0015810003
Tumor
-0.5
CPT0020120003
Tumor
-0.5
CPT0066470004
Tumor
-0.5
CPT0092290003
Tumor
-0.5
CPT0025880003
Tumor
-0.5
CPT0069160003
Tumor
-0.5
CPT0089020003
Tumor
-0.5
CPT0075720003
Tumor
-0.5
CPT0092160003
Tumor
-0.5
CPT0086030003
Tumor
-0.5
CPT0066480003
Tumor
-0.5
CPT0075560003
Tumor
-0.5
CPT0078510003
Tumor
-0.5
CPT0092190003
Normal
-0.5
CPT0088690003
Tumor
-0.5
CPT0012280003
Tumor
-0.5
CPT0092790003
Tumor
-0.5
CPT0025050003
Tumor
-0.5
CPT0025230003
Tumor
-0.5
CPT0078990003
Tumor
-0.5
CPT0011410003
Tumor
-0.5
CPT0025290003
Tumor
-0.6
CPT0086870003
Tumor
-0.6
CPT0077320001
Normal
-0.6
CPT0085670003
Tumor
-0.6
CPT0086360003
Tumor
-0.6
CPT0084590001
Normal
-0.6
CPT0012670003
Tumor
-0.6
CPT0065690003
Tumor
-0.7
CPT0010110003
Tumor
-0.7
CPT0088480003
Tumor
-0.7
CPT0088760003
Tumor
-0.7
CPT0065870003
Tumor
-0.7
CPT0081600003
Tumor
-0.7
CPT0076330003
Tumor
-0.7
CPT0081880003
Tumor
-0.7
CPT0015910003
Tumor
-0.8
CPT0086950003
Tumor
-0.8
CPT0086820003
Tumor
-0.8
CPT0001260009
Tumor
-0.8
CPT0023350003
Tumor
-0.8
CPT0001180009
Tumor
-0.9
CPT0088630003
Tumor
-0.9
CPT0063630003
Tumor
-0.9
CPT0002350011
Tumor
-0.9
CPT0092730003
Tumor
-0.9
CPT0088550004
Tumor
-1.0
CPT0012180003
Tumor
-1.0
CPT0017850003
Tumor
-1.0
CPT0084560003
Tumor
-1.1
CPT0075130003
Tumor
-1.1
CPT0079380003
Tumor
-1.2
CPT0001340003
Tumor
-1.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.