We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PEBP1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
957.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
2681.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
2364.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
2302.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
2143.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
2130.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
1974.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
1931.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1922.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
1919.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
1895.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
1821.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
1786.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
1722.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1705.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
1690.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1679.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
1676.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
1671.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
1658.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1614.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
1600.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1594.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1594.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1579.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1573.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1569.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1568.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
1564.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
1558.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1550.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1543.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
1543.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
1526.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1502.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
1501.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
1496.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
1480.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
1472.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1459.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
1457.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
1445.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
1444.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1439.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
1432.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1431.9
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1416.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
1412.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
1405.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
1405.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
1403.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
1402.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
1398.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1391.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
1390.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
1376.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1375.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
1372.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
1368.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
1364.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1363.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
1363.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1358.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1354.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1352.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1337.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
1337.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1336.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
1332.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
1332.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
1308.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1308.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1304.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
1300.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1299.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1297.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1280.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
1279.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
1274.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1274.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
1270.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
1269.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1260.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
1246.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
1245.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1240.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1239.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1237.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
1234.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1232.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1231.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
1230.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
1229.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1229.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1228.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
1223.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
1222.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1221.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
1219.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
1217.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
1211.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1206.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
1203.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
1200.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
1194.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1193.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1192.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
1190.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
1187.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1187.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1182.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1180.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1176.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
1158.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1156.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
1151.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
1150.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
1147.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
1147.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
1142.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
1138.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1131.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1128.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1126.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
1126.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1122.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1117.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
1112.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
1110.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1106.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
1104.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
1093.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
1086.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1086.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
1085.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1084.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
1083.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
1082.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1080.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1074.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1073.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
1072.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
1071.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
1071.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
1070.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
1064.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1063.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
1058.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
1057.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1054.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
1054.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
1053.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
1051.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1047.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1039.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
1035.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
1033.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
1026.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
1025.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
1022.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1020.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
1018.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1017.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
1015.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
1008.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
1007.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
1001.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
980.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
979.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
975.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
971.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
971.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
971.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
967.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
961.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
958.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
955.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
951.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
949.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
945.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
938.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
936.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
936.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
932.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
925.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
924.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
921.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
920.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
910.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
906.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
897.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
894.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
888.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
885.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
885.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
877.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
877.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
876.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
871.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
870.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
867.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
867.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
865.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
864.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
864.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
862.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
855.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
852.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
847.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
845.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
837.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
829.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
829.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
827.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
820.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
819.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
818.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
816.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
814.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
813.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
809.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
805.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
802.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
801.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
800.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
798.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
797.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
791.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
788.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
778.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
778.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
769.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
767.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
762.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
762.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
761.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
758.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
758.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
752.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
749.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
747.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
747.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
746.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
743.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
742.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
739.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
735.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
734.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
733.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
729.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
727.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
724.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
718.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
718.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
717.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
703.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
696.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
688.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
682.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
674.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
673.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
673.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
665.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
657.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
655.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
652.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
648.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
642.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
640.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
635.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
633.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
632.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
627.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
625.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
624.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
617.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
617.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
611.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
609.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
608.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
607.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
605.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
604.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
603.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
603.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
602.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
602.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
594.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
593.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
581.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
580.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
571.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
564.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
564.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
562.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
561.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
549.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
538.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
537.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
534.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
523.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
522.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
521.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
511.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
509.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
509.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
502.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
501.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
499.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
497.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
490.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
484.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
483.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
481.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
481.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
476.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
473.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
473.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
473.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
471.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
470.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
468.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
466.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
462.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
459.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
442.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
441.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
437.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
417.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
408.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
403.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
401.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
399.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
397.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
384.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
379.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
364.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
359.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
356.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
345.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
339.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
338.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
333.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
330.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
327.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
326.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
323.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
323.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
322.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
321.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
317.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
311.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
287.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
270.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
249.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
219.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
216.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
188.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
179.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
168.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
95.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
94.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PEBP1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
807.3
Number of samples
231
Samples
Sample
Description
TPM
DO50811
0 years, male, NA, stage:1, alive, 450 days
2072.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
1966.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
1963.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
1857.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
1804.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
1791.1
DO23532
0 years, female, NA, stage:1, alive, 960 days
1760.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
1760.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
1723.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
1676.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1675.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
1670.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
1605.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
1603.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
1588.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
1531.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
1490.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
1488.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
1465.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
1464.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
1415.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
1412.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
1411.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
1410.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
1367.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1347.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
1324.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
1316.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
1310.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
1296.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
1281.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
1274.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
1271.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
1243.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
1237.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
1225.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
1213.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
1212.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
1210.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
1196.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1176.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
1166.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
1154.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
1143.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
1136.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1136.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
1119.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
1113.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
1112.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
1107.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
1102.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
1097.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
1096.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
1092.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
1088.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
1080.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
1078.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
1070.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
1059.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
1059.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
1050.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
1037.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
1035.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
1034.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
1034.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
1026.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
1024.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
1016.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
1002.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
999.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
986.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
972.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
971.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
952.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
943.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
942.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
921.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
918.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
918.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
913.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
906.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
905.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
897.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
893.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
879.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
877.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
867.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
866.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
859.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
858.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
856.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
854.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
853.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
852.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
851.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
851.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
842.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
842.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
831.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
829.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
823.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
821.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
816.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
814.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
806.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
796.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
792.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
791.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
788.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
786.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
780.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
775.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
771.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
770.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
765.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
756.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
754.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
754.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
753.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
750.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
745.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
739.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
730.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
728.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
726.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
724.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
723.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
717.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
716.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
709.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
705.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
697.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
696.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
694.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
670.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
664.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
664.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
662.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
655.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
652.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
652.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
651.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
646.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
645.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
643.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
640.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
631.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
629.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
625.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
624.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
618.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
605.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
603.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
602.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
596.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
594.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
584.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
580.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
576.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
572.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
570.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
569.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
560.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
558.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
551.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
550.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
530.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
523.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
520.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
518.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
512.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
503.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
500.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
499.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
492.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
490.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
486.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
485.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
477.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
461.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
451.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
433.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
422.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
419.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
418.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
418.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
401.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
400.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
399.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
396.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
391.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
385.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
385.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
371.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
369.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
363.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
360.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
359.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
342.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
342.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
335.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
332.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
327.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
327.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
312.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
310.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
304.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
290.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
288.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
286.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
279.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
276.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
274.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
268.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
241.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
231.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
225.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
222.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
219.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
195.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
192.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
187.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
182.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
180.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
164.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
159.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
156.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
125.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
123.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
113.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
41.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
698
Normal
1.0
342
Normal
0.8
742
Normal
0.8
1046
Normal
0.8
744
Normal
0.7
546
Normal
0.7
196
Normal
0.7
723
Tumor
0.7
862
Normal
0.7
746
Normal
0.7
1022
Normal
0.7
738
Normal
0.7
186
Normal
0.7
818
Normal
0.7
882
Normal
0.6
1026
Normal
0.6
298
Normal
0.6
436
Normal
0.6
128
Normal
0.6
482
Normal
0.6
376
Normal
0.6
858
Normal
0.6
924
Normal
0.6
618
Normal
0.6
756
Normal
0.6
568
Normal
0.6
332
Normal
0.6
222
Normal
0.6
426
Normal
0.6
488
Normal
0.5
414
Normal
0.5
616
Normal
0.5
878
Normal
0.5
452
Normal
0.5
824
Normal
0.5
714
Normal
0.5
111
Normal
0.5
484
Normal
0.5
864
Normal
0.5
462
Normal
0.5
786
Normal
0.5
314
Normal
0.5
356
Normal
0.5
912
Normal
0.5
982
Normal
0.5
481
Tumor
0.5
867
Tumor
0.5
938
Normal
0.5
472
Normal
0.5
964
Normal
0.5
358
Normal
0.5
1044
Normal
0.5
114
Normal
0.5
572
Normal
0.5
534
Normal
0.5
172
Normal
0.5
428
Normal
0.5
1032
Normal
0.4
664
Normal
0.4
922
Normal
0.4
112
Tumor
0.4
636
Normal
0.4
394
Normal
0.4
722
Normal
0.4
648
Normal
0.4
1016
Normal
0.4
422
Normal
0.4
424
Normal
0.4
874
Normal
0.4
132
Normal
0.4
258
Normal
0.4
412
Normal
0.4
218
Normal
0.4
354
Normal
0.4
162
Normal
0.4
866
Normal
0.4
127
Tumor
0.4
716
Normal
0.4
728
Normal
0.4
448
Normal
0.4
214
Normal
0.4
148
Normal
0.4
628
Normal
0.4
388
Normal
0.4
432
Normal
0.4
446
Normal
0.4
696
Normal
0.4
926
Normal
0.4
914
Normal
0.4
344
Normal
0.3
966
Normal
0.3
741
Tumor
0.3
146
Normal
0.3
228
Normal
0.3
952
Normal
0.3
666
Normal
0.3
976
Normal
0.3
944
Normal
0.3
778
Normal
0.3
364
Normal
0.3
884
Normal
0.3
564
Normal
0.3
232
Normal
0.3
466
Normal
0.3
352
Normal
0.3
1014
Normal
0.3
956
Normal
0.3
286
Normal
0.3
686
Normal
0.3
261
Tumor
0.3
816
Normal
0.3
366
Normal
0.3
136
Normal
0.3
278
Normal
0.3
662
Normal
0.3
518
Normal
0.3
955
Tumor
0.3
528
Normal
0.3
464
Normal
0.3
272
Normal
0.3
852
Normal
0.3
978
Normal
0.3
984
Normal
0.3
416
Normal
0.3
642
Normal
0.3
516
Normal
0.3
328
Normal
0.2
954
Normal
0.2
435
Tumor
0.2
362
Normal
0.2
868
Normal
0.2
554
Normal
0.2
968
Normal
0.2
124
Normal
0.2
981
Tumor
0.2
392
Normal
0.2
538
Normal
0.2
142
Normal
0.2
396
Normal
0.2
958
Normal
0.2
456
Normal
0.2
615
Tumor
0.2
1028
Normal
0.2
138
Normal
0.2
386
Normal
0.2
918
Normal
0.2
368
Normal
0.2
474
Normal
0.2
915
Tumor
0.2
465
Tumor
0.2
1042
Normal
0.2
312
Normal
0.2
514
Normal
0.2
384
Normal
0.1
785
Tumor
0.1
558
Normal
0.1
126
Normal
0.1
494
Normal
0.1
341
Tumor
0.1
526
Normal
0.1
468
Normal
0.1
284
Normal
0.1
212
Normal
0.1
574
Normal
0.1
171
Tumor
0.1
916
Normal
0.1
431
Tumor
0.1
911
Tumor
0.1
478
Normal
0.1
672
Normal
0.1
487
Tumor
0.0
1027
Tumor
0.0
262
Normal
0.0
627
Tumor
0.0
1043
Tumor
0.0
571
Tumor
0.0
513
Tumor
0.0
515
Tumor
0.0
227
Tumor
0.0
147
Tumor
0.0
363
Tumor
0.0
327
Tumor
0.0
745
Tumor
0.0
224
Normal
0.0
353
Tumor
0.0
695
Tumor
0.0
423
Tumor
-0.1
755
Tumor
-0.1
365
Tumor
-0.1
498
Normal
-0.1
113
Tumor
-0.1
517
Tumor
-0.1
415
Tumor
-0.1
433
Tumor
-0.1
617
Tumor
-0.1
361
Tumor
-0.1
188
Normal
-0.1
411
Tumor
-0.2
1013
Tumor
-0.2
268
Normal
-0.2
563
Tumor
-0.2
715
Tumor
-0.2
1041
Tumor
-0.2
873
Tumor
-0.2
123
Tumor
-0.2
434
Normal
-0.2
1045
Tumor
-0.2
524
Normal
-0.2
393
Tumor
-0.2
635
Tumor
-0.2
1025
Tumor
-0.2
137
Tumor
-0.2
861
Tumor
-0.2
257
Tumor
-0.3
192
Normal
-0.3
185
Tumor
-0.3
421
Tumor
-0.3
921
Tumor
-0.3
217
Tumor
-0.3
777
Tumor
-0.3
492
Normal
-0.3
444
Normal
-0.3
721
Tumor
-0.3
425
Tumor
-0.3
727
Tumor
-0.3
883
Tumor
-0.3
977
Tumor
-0.4
141
Tumor
-0.4
451
Tumor
-0.4
231
Tumor
-0.4
536
Normal
-0.4
267
Tumor
-0.4
857
Tumor
-0.4
145
Tumor
-0.4
647
Tumor
-0.4
483
Tumor
-0.4
553
Tumor
-0.4
685
Tumor
-0.4
195
Tumor
-0.5
925
Tumor
-0.5
161
Tumor
-0.5
957
Tumor
-0.5
851
Tumor
-0.5
1031
Tumor
-0.5
443
Tumor
-0.5
865
Tumor
-0.6
963
Tumor
-0.6
463
Tumor
-0.6
641
Tumor
-0.6
357
Tumor
-0.6
355
Tumor
-0.6
271
Tumor
-0.6
461
Tumor
-0.6
471
Tumor
-0.7
923
Tumor
-0.7
1015
Tumor
-0.7
877
Tumor
-0.7
187
Tumor
-0.7
221
Tumor
-0.7
125
Tumor
-0.7
823
Tumor
-0.7
445
Tumor
-0.7
477
Tumor
-0.7
713
Tumor
-0.8
447
Tumor
-0.8
951
Tumor
-0.8
913
Tumor
-0.8
135
Tumor
-0.8
1021
Tumor
-0.8
557
Tumor
-0.8
665
Tumor
-0.8
967
Tumor
-0.8
387
Tumor
-0.8
383
Tumor
-0.8
663
Tumor
-0.9
937
Tumor
-0.9
743
Tumor
-0.9
277
Tumor
-0.9
191
Tumor
-0.9
131
Tumor
-0.9
493
Tumor
-0.9
975
Tumor
-0.9
815
Tumor
-0.9
297
Tumor
-0.9
881
Tumor
-0.9
473
Tumor
-0.9
737
Tumor
-0.9
814
Normal
-0.9
863
Tumor
-0.9
965
Tumor
-1.0
313
Tumor
-1.0
455
Tumor
-1.0
331
Tumor
-1.0
351
Tumor
-1.0
223
Tumor
-1.0
413
Tumor
-1.0
943
Tumor
-1.1
523
Tumor
-1.1
467
Tumor
-1.1
917
Tumor
-1.1
375
Tumor
-1.1
953
Tumor
-1.1
213
Tumor
-1.1
545
Tumor
-1.1
395
Tumor
-1.1
427
Tumor
-1.2
537
Tumor
-1.2
533
Tumor
-1.2
813
Tumor
-1.2
817
Tumor
-1.2
491
Tumor
-1.3
724
Normal
-1.3
285
Tumor
-1.3
343
Tumor
-1.4
983
Tumor
-1.4
391
Tumor
-1.4
525
Tumor
-1.4
697
Tumor
-1.4
573
Tumor
-1.5
567
Tumor
-1.5
671
Tumor
-1.5
497
Tumor
-1.5
367
Tumor
-1.6
311
Tumor
-1.6
283
Tumor
-1.6
527
Tumor
-1.7
385
Tumor
-1.7
535
Tumor
-1.7
661
Tumor
-2.1
211
Tumor
-2.1
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.