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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
728.5
nTPM
FANTOM5:
790.5
Scaled Tags Per Million
Allen mouse:
0.0
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
728.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 559.0
2188
Female, age 91, both hemispheres
582.4
2301
Female, age 85, both hemispheres
579.6
2090
Male, age 80, both hemispheres
555.2
1984
Male, age 76, both hemispheres
518.7
Dorsal cochlear nucleus nTPM: 560.0
2802
Male, age 74, right hemisphere
651.4
2187
Female, age 91, both hemispheres
612.1
2058
Male, age 76, both hemispheres
571.4
2370
Male, age 61, both hemispheres
491.9
2378
Male, age 80, both hemispheres
473.5
Dorsal tegmental nucleus nTPM: 560.4
2083
Male, age 80, both hemispheres
665.8
2326
Male, age 74, both hemispheres
662.9
1936
Male, age 76, left hemisphere
541.5
2358
Male, age 61, both hemispheres
371.2
Dorsolateral tegmental area nTPM: 572.6
2751
Female, age 85, both hemispheres
710.2
2654
Male, age 80, both hemispheres
652.7
2360
Male, age 74, both hemispheres
594.6
2141
Male, age 76, both hemispheres
522.9
2337
Male, age 61, both hemispheres
382.9
Kolliker-Fuse nucleus nTPM: 617.0
2315
Male, age 76, right hemisphere
701.8
2163
Male, age 80, both hemispheres
595.6
2793
Female, age 91, left hemisphere
553.8
Lateral lemniscal nuclei nTPM: 618.5
2746
Female, age 85, left hemisphere
691.1
2169
Male, age 76, both hemispheres
669.9
2036
Male, age 80, both hemispheres
625.4
2453
Male, age 74, right hemisphere
590.0
2320
Female, age 91, left hemisphere
516.1
Lateral parabrachial nucleus nTPM: 606.8
2139
Female, age 85, right hemisphere
725.4
2792
Male, age 76, both hemispheres
630.8
2013
Male, age 80, both hemispheres
605.0
2790
Male, age 61, both hemispheres
466.2
Lateral vestibular nucleus nTPM: 596.2
2311
Male, age 80, both hemispheres
607.3
2184
Male, age 76, both hemispheres
585.1
Locus coeruleus nTPM: 609.4
2014
Male, age 55, unknown
704.7
2123
Female, age 91, both hemispheres
671.4
2317
Female, age 72, unknown
642.8
2788
Male, age 74, unknown
621.1
1980
Male, age 76, both hemispheres
556.0
2720
Male, age 74, both hemispheres
543.6
2162
Male, age 80, both hemispheres
525.9
Medial parabrachial nucleus nTPM: 600.1
2170
Female, age 91, both hemispheres
745.4
2463
Female, age 85, right hemisphere
646.1
2854
Male, age 80, both hemispheres
578.6
2786
Male, age 76, both hemispheres
536.8
2156
Male, age 61, both hemispheres
493.4
Medial periolivary nuclei nTPM: 628.9
2063
Male, age 76, both hemispheres
750.6
2791
Male, age 74, right hemisphere
740.4
2171
Female, age 85, both hemispheres
690.8
2081
Male, age 80, both hemispheres
516.4
2458
Female, age 91, both hemispheres
446.2
Motor facial nucleus nTPM: 600.9
2062
Male, age 76, both hemispheres
775.6
2365
Male, age 74, right hemisphere
719.7
2126
Male, age 61, both hemispheres
595.9
2795
Female, age 91, both hemispheres
528.0
2697
Female, age 85, both hemispheres
504.5
2327
Male, age 80, both hemispheres
481.7
Motor trigeminal nucleus nTPM: 540.8
2079
Male, age 80, both hemispheres
586.9
2309
Male, age 76, both hemispheres
565.5
2560
Male, age 74, both hemispheres
558.9
2335
Male, age 61, both hemispheres
521.6
2321
Female, age 91, both hemispheres
470.9
Nuclei of the trapezoid body nTPM: 680.9
2159
Male, age 61, both hemispheres
822.2
1983
Male, age 76, both hemispheres
773.9
2735
Female, age 85, both hemispheres
743.4
2166
Male, age 80, both hemispheres
538.5
2368
Female, age 91, both hemispheres
526.7
Nucleus raphe magnus nTPM: 666.3
2160
Male, age 61, both hemispheres
973.7
2455
Male, age 74, both hemispheres
712.5
2172
Female, age 85, both hemispheres
649.2
2051
Male, age 76, both hemispheres
634.2
2328
Male, age 80, both hemispheres
542.6
2459
Female, age 91, both hemispheres
485.7
Paramedian reticular nucleus nTPM: 636.9
2057
Male, age 80, both hemispheres
696.8
2050
Female, age 85, both hemispheres
693.5
2313
Male, age 61, both hemispheres
586.2
2052
Male, age 76, both hemispheres
571.1
Pedunculopontine tegmental nucleus nTPM: 564.6
1921
Female, age 85, both hemispheres
623.0
2334
Male, age 80, both hemispheres
602.8
2338
Male, age 61, both hemispheres
468.1
Pontine nuclei nTPM: 728.5
2727
Male, age 61, right hemisphere
970.0
1863
Male, age 55, unknown
868.5
2787
Female, age 85, both hemispheres
768.2
2109
Female, age 72, unknown
746.8
1968
Male, age 76, left hemisphere
700.0
2454
Male, age 74, left hemisphere
681.6
2319
Female, age 91, both hemispheres
592.3
2115
Male, age 80, left hemisphere
500.4
Pontine raphe nucleus nTPM: 650.7
2122
Female, age 85, midline
702.2
2853
Male, age 76, midline
599.2
Posteroventral cochlear nucleus nTPM: 610.9
2752
Female, age 85, both hemispheres
691.4
2070
Male, age 76, both hemispheres
626.9
2135
Female, age 91, both hemispheres
615.0
2341
Male, age 80, both hemispheres
584.0
2371
Male, age 61, both hemispheres
536.9
Principal sensory trigeminal nucleus nTPM: 639.5
2158
Male, age 61, both hemispheres
842.0
2008
Male, age 80, left hemisphere
632.9
2324
Male, age 76, both hemispheres
570.6
2367
Female, age 91, left hemisphere
512.5
Reticular pontine nucleus, caudal nTPM: 592.7
2092
Male, age 76, both hemispheres
682.8
2457
Female, age 91, both hemispheres
566.5
2559
Male, age 74, both hemispheres
564.6
2332
Male, age 80, right hemisphere
556.8
Reticular pontine nucleus, oral nTPM: 631.2
2361
Male, age 74, both hemispheres
699.0
2012
Female, age 85, both hemispheres
677.2
1939
Male, age 80, both hemispheres
660.0
2167
Male, age 76, both hemispheres
571.3
2366
Female, age 91, both hemispheres
548.2
Reticulotegmental nucleus nTPM: 579.5
2325
Male, age 76, both hemispheres
590.3
2452
Male, age 74, both hemispheres
581.9
2322
Female, age 91, both hemispheres
579.4
2333
Male, age 80, both hemispheres
566.3
Spinal trigeminal nucleus, oral nTPM: 573.7
2737
Female, age 85, both hemispheres
608.2
1978
Male, age 76, both hemispheres
570.1
2164
Male, age 80, both hemispheres
542.7
Subcoeruleus area nTPM: 614.7
2369
Female, age 85, left hemisphere
693.6
1958
Male, age 80, both hemispheres
636.5
2323
Female, age 91, left hemisphere
589.6
2451
Male, age 74, both hemispheres
584.9
2089
Male, age 76, left hemisphere
568.7
Superior olive nTPM: 620.5
2364
Male, age 74, right hemisphere
791.9
1875
Female, age 85, both hemispheres
707.8
2020
Male, age 76, both hemispheres
665.1
2329
Male, age 80, right hemisphere
510.6
2561
Female, age 91, both hemispheres
427.0
Ventral periolivary nuclei nTPM: 597.0
2023
Male, age 76, both hemispheres
688.3
2130
Female, age 85, both hemispheres
647.8
2165
Male, age 80, both hemispheres
646.4
2794
Female, age 91, left hemisphere
405.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 569.5
2449
Male, age 74, both hemispheres
631.0
1959
Male, age 76, both hemispheres
628.7
2840
Female, age 85, both hemispheres
609.2
2161
Male, age 80, both hemispheres
536.2
2359
Male, age 61, both hemispheres
509.9
2456
Female, age 91, both hemispheres
502.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
