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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
752.9
nTPM
HPA Brain:
649.9
nTPM
GTEx:
752.9
nTPM
FANTOM5:
498.3
Scaled Tags Per Million
Mouse:
0.3
nTPM
Allen mouse:
0.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
649.9
Sample id
Sample description
nTPM
Amygdala nTPM: 649.9
2814
Male, age 76, right hemisphere
822.1
2514
Male, age 75, right hemisphere
640.0
2695
Female, age 67, right hemisphere
618.5
1987
Female, age 91, left hemisphere
618.1
2517
Female, age 94, left hemisphere
550.6
Basal amygdala nTPM: 496.9
2609
Male, age 75, right hemisphere
594.3
1955
Male, age 76, both hemispheres
590.0
2110
Male, age 80, left hemisphere
528.2
2243
Female, age 91, right hemisphere
469.4
2685
Female, age 94, left hemisphere
462.0
2827
Female, age 67, right hemisphere
337.5
Central amygdala nTPM: 590.9
1905
Male, age 76, both hemispheres
787.6
2515
Male, age 75, right hemisphere
619.1
2826
Female, age 94, left hemisphere
603.9
2239
Male, age 80, left hemisphere
514.4
2701
Female, age 91, right hemisphere
429.5
Corticomedial amygdala nTPM: 500.7
2428
Male, age 75, right hemisphere
600.5
2829
Male, age 80, left hemisphere
573.0
2240
Male, age 76, both hemispheres
516.8
2429
Female, age 94, left hemisphere
481.5
2242
Female, age 91, right hemisphere
478.0
2535
Female, age 67, right hemisphere
354.4
Lateral amygdala nTPM: 540.0
1883
Male, age 76, both hemispheres
711.5
2516
Male, age 75, right hemisphere
666.5
2534
Female, age 94, left hemisphere
594.1
2255
Female, age 91, right hemisphere
458.4
2256
Male, age 80, left hemisphere
425.2
2830
Female, age 67, right hemisphere
384.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
752.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 752.9
Samples: 152
Max nTPM: 1693.2
Min nTPM: 87.7
Std nTPM: 222.7
Median nTPM: 727.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1693.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1623.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
1437.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
1400.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
1325.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
1238.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
1187.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
1155.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
1086.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
1074.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
1069.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
1039.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
1037.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
1005.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
991.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
984.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
977.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
949.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
949.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
945.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
929.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
929.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
925.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
905.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
902.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
901.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
895.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
892.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
888.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
885.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
882.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
881.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
880.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
878.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
877.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
862.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
860.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
859.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
857.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
855.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
852.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
848.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
829.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
829.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
824.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
820.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
819.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
812.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
808.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
803.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
801.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
798.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
797.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
796.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
796.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
782.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
781.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
781.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
778.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
777.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
776.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
767.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
754.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
754.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
753.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
752.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
752.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
750.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
747.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
744.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
741.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
738.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
730.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
730.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
729.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
728.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
727.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
726.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
721.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
720.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
716.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
715.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
710.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
706.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
702.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
699.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
698.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
695.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
691.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
688.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
687.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
687.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
684.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
681.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
678.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
676.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
673.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
673.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
672.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
671.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
671.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
668.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
664.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
663.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
662.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
657.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
650.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
649.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
649.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
648.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
644.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
642.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
636.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
635.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
630.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
628.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
621.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
620.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
618.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
617.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
611.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
608.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
600.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
600.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
597.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
592.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
586.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
571.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
564.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
563.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
560.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
559.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
550.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
549.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
530.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
530.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
498.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
493.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
489.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
483.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
475.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
472.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
471.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
463.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
444.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
433.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
429.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
420.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
383.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
326.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
284.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
87.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
0.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 0.3
Samples: 4
Max nTPM: 0.7
Min nTPM: 0.0
Sample A
Male
0.0
Sample B
Male
0.4
Sample C
Female
0.7
Sample D
Female
0.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.