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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MMP2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
2082.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
115.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
99.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
91.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
77.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
68.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
58.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
49.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
44.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
44.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
40.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
25.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
24.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
24.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
22.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
21.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
21.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
21.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
20.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
20.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
16.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
16.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
16.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
15.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
15.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
15.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
14.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
14.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
14.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
13.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
12.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
11.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
10.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
10.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
9.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
9.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
9.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
8.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
7.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
7.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
5.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
5.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
5.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
4.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
3.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
3.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
3.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
3.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
2.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MMP2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
697.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
486.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
413.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
392.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
358.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
254.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
223.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
214.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
209.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
179.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
175.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
174.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
169.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
159.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
158.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
152.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
151.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
149.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
143.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
143.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
140.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
133.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
127.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
124.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
122.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
121.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
119.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
114.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
114.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
110.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
109.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
106.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
106.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
105.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
105.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
104.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
104.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
103.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
103.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
103.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
102.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
102.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
101.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
101.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
101.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
100.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
97.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
97.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
96.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
96.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
94.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
92.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
92.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
92.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
92.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
91.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
90.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
90.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
88.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
88.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
86.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
84.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
82.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
81.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
79.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
78.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
78.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
77.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
76.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
75.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
75.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
75.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
74.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
74.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
74.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
72.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
72.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
71.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
70.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
69.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
69.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
65.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
65.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
64.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
64.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
63.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
63.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
62.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
61.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
61.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
61.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
61.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
61.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
61.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
60.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
58.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
58.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
57.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
57.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
57.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
57.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
55.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
55.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
55.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
54.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
54.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
53.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
53.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
52.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
52.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
52.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
51.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
51.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
51.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
51.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
50.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
50.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
49.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
49.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
49.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
49.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
49.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
48.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
48.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
48.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
48.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
48.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
48.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
47.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
47.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
46.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
46.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
46.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
46.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
45.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
45.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
45.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
45.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
44.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
44.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
44.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
44.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
43.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
43.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
43.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
43.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
42.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
42.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
42.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
42.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
42.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
42.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
42.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
42.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
42.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
41.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
41.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
41.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
41.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
41.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
40.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
40.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
40.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
40.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
39.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
39.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
39.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
39.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
38.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
38.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
38.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
38.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
37.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
37.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
37.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
37.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
37.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
37.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
37.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
36.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
36.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
36.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
36.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
36.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
36.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
35.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
35.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
35.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
35.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
35.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
35.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
34.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
34.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
34.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
34.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
34.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
33.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
33.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
33.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
33.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
33.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
33.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
33.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
32.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
32.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
32.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
32.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
32.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
31.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
31.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
31.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
31.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
31.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
30.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
30.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
30.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
30.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
30.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
30.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
30.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
30.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
30.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
30.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
29.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
29.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
29.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
29.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
29.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
29.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
29.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
29.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
29.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
29.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
28.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
28.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
28.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
28.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
28.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
28.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
28.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
28.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
28.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
28.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
28.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
27.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
27.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
27.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
27.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
27.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
27.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
27.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
27.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
27.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
26.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
26.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
26.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
26.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
26.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
26.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
25.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
25.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
25.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
25.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
25.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
24.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
24.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
24.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
24.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
24.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
24.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
24.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
24.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
24.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
24.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
24.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
24.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
24.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
23.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
23.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
23.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
23.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
23.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
23.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
23.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
22.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
22.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
22.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
22.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
22.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
22.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
22.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
22.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
21.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
21.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
21.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
21.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
21.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
21.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
21.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
21.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
20.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
20.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
20.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
20.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
20.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
20.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
20.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
20.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
20.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
20.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
20.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
20.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
19.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
19.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
19.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
19.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
19.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
19.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
19.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
18.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
18.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
18.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
18.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
18.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
18.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
18.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
18.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
17.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
17.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
17.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
17.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
17.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
17.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
17.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
17.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
16.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
16.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
16.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
16.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
16.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
16.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
16.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
16.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
16.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
16.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
16.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
16.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
16.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
15.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
15.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
15.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
15.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
15.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
15.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
14.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
14.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
14.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
14.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
14.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
14.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
14.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
14.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
14.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
14.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
14.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
14.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
14.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
14.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
13.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
13.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
13.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
13.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
13.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
13.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
13.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
13.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
12.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
12.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
12.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
12.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
12.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
12.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
12.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
12.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
11.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
11.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
11.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
11.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
11.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
11.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
10.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
10.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
10.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
10.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
10.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
10.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
10.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
10.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
10.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
10.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
9.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
9.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
9.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
9.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
9.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
9.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
9.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
9.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
9.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
9.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
8.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
8.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
8.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
8.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
8.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
8.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
8.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
8.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
8.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
8.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
8.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
8.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
8.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
8.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
8.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
8.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
8.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
8.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
7.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
7.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
7.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
7.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
7.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
6.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
6.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
6.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
6.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
6.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
6.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
6.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
6.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
6.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
6.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
6.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
6.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
6.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
6.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
5.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
5.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
5.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
5.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
5.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
4.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
4.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
4.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
4.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
3.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
3.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
2.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
2.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
2.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
2.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
2.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MMP2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
349.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
176.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
154.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
143.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
143.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
140.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
131.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
125.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
112.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
94.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
76.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
71.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
70.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
69.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
57.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
56.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
56.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
51.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
51.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
50.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
49.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
47.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
45.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
40.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
38.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
37.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
37.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
36.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
36.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
35.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
35.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
34.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
34.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
34.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
33.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
31.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
29.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
29.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
28.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
28.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
28.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
28.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
27.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
27.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
26.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
25.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
25.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
25.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
24.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
24.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
23.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
23.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
23.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
22.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
22.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
21.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
21.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
21.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
21.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
21.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
20.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
19.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
19.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
18.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
17.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
17.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
16.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
15.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
14.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
14.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
14.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
14.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
13.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
12.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
12.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
11.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
9.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
9.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
8.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
8.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
8.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
7.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
7.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
7.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
6.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
6.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
6.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
6.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
6.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
6.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
5.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
5.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
3.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
3.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
2.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MMP2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
471.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
327.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
313.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
277.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
191.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
179.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
166.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
158.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
130.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
129.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
125.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
87.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
81.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
80.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
70.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
70.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
58.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
54.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
53.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
53.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
53.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
49.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
49.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
48.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
47.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
47.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
46.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
46.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
46.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
46.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
45.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
44.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
43.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
43.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
42.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
41.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
40.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
39.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
36.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
33.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
32.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
32.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
31.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
31.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
30.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
30.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
29.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
29.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
29.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
28.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
27.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
25.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
25.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
24.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
23.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
23.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
23.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
23.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
22.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
22.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
22.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
22.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
22.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
21.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
21.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
20.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
20.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
20.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
19.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
19.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
19.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
19.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
19.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
19.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
18.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
18.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
18.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
18.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
17.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
17.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
17.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
16.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
16.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
16.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
16.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
16.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
16.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
15.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
15.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
15.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
15.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
15.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
14.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
14.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
14.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
14.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
14.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
13.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
13.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
13.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
13.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
13.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
12.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
12.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
12.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
12.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
12.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
12.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
12.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
12.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
12.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
11.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
11.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
11.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
11.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
11.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
11.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
11.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
11.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
11.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
11.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
11.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
10.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
10.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
10.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
10.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
10.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
10.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
10.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
10.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
9.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
9.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
9.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
9.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
9.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
9.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
9.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
8.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
8.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
8.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
8.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
8.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
8.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
8.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
7.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
7.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
7.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
7.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
7.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
7.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
7.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
7.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
7.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
6.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
6.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
6.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
6.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
6.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
6.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
6.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
6.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
6.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
6.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
6.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
6.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
6.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
6.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
6.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
6.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
5.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
5.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
5.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
5.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
5.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
5.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
5.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
5.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
5.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
5.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
5.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
5.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
5.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
5.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
5.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
5.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
5.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
5.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
5.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
5.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
5.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
5.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
4.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
4.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
4.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
4.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
4.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
4.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
4.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
4.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
4.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
4.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
4.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
4.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
4.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
4.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
4.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
4.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
3.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
3.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
3.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
3.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
3.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
3.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
3.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
3.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
3.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
3.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
2.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
2.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
2.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
2.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
2.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
2.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
2.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
1.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
1.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
1.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
1.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
1.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
1.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
1.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
1.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
1.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
0.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
0.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
0.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
2.4
CPT0088550004
Tumor
2.1
CPT0092190003
Normal
1.8
CPT0015910003
Tumor
1.6
CPT0084560003
Tumor
1.6
CPT0011240003
Tumor
1.3
CPT0010120001
Normal
1.2
CPT0077320001
Normal
1.1
CPT0084590001
Normal
1.0
CPT0079510001
Normal
1.0
CPT0088970003
Tumor
1.0
CPT0014470001
Normal
0.9
CPT0081990003
Tumor
0.9
CPT0024680001
Normal
0.9
CPT0002370001
Normal
0.8
CPT0017850003
Tumor
0.8
CPT0001270001
Normal
0.7
CPT0066480003
Tumor
0.6
CPT0079300001
Normal
0.6
CPT0000890001
Normal
0.6
CPT0012290003
Normal
0.6
CPT0085670003
Tumor
0.5
CPT0088630003
Tumor
0.5
CPT0065820001
Normal
0.5
CPT0010170001
Normal
0.5
CPT0069190001
Normal
0.5
CPT0012640003
Normal
0.5
CPT0012920003
Normal
0.5
CPT0025060001
Normal
0.5
CPT0075570001
Normal
0.5
CPT0009020003
Normal
0.5
CPT0013790003
Normal
0.4
CPT0006730001
Normal
0.4
CPT0065690003
Tumor
0.4
CPT0065930003
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0086830003
Normal
0.4
CPT0025920001
Normal
0.4
CPT0012570003
Normal
0.3
CPT0000660001
Normal
0.3
CPT0075170001
Normal
0.3
CPT0088500001
Normal
0.3
CPT0065870003
Tumor
0.3
CPT0012090003
Normal
0.3
CPT0092730003
Tumor
0.3
CPT0063640001
Normal
0.3
CPT0089040001
Normal
0.2
CPT0069000003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0086870003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0087050003
Normal
0.2
CPT0078530001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0064400001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0066520001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0019160001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0077140001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0001340003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0077490003
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0012900004
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0007470001
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0092800003
Normal
-0.2
CPT0075130003
Tumor
-0.2
CPT0078940001
Normal
-0.2
CPT0010160003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0006950001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0025350003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0089480003
Normal
-0.3
CPT0087040003
Tumor
-0.3
CPT0065450001
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0025290003
Tumor
-0.3
CPT0017410003
Tumor
-0.3
CPT0071150004
Tumor
-0.4
CPT0089020003
Tumor
-0.4
CPT0021240003
Tumor
-0.4
CPT0006900003
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0078510003
Tumor
-0.4
CPT0000870016
Tumor
-0.4
CPT0025880003
Tumor
-0.5
CPT0006630003
Tumor
-0.5
CPT0014160003
Tumor
-0.5
CPT0064370003
Tumor
-0.5
CPT0019130003
Tumor
-0.5
CPT0079380003
Tumor
-0.5
CPT0012280003
Tumor
-0.5
CPT0001220008
Tumor
-0.5
CPT0078660003
Tumor
-0.5
CPT0001350001
Normal
-0.6
CPT0081880003
Tumor
-0.6
CPT0015810003
Tumor
-0.6
CPT0086820003
Tumor
-0.6
CPT0001260009
Tumor
-0.6
CPT0079410003
Tumor
-0.6
CPT0009060003
Tumor
-0.6
CPT0092160003
Tumor
-0.7
CPT0088780001
Normal
-0.7
CPT0079480003
Tumor
-0.7
CPT0077110003
Tumor
-0.7
CPT0065430003
Tumor
-0.7
CPT0025230003
Tumor
-0.8
CPT0023690003
Tumor
-0.8
CPT0088480003
Tumor
-0.8
CPT0011410003
Tumor
-0.8
CPT0065750003
Tumor
-0.8
CPT0088690003
Tumor
-0.8
CPT0009000003
Tumor
-0.8
CPT0092290003
Tumor
-0.8
CPT0025580004
Tumor
-0.8
CPT0007320003
Tumor
-0.8
CPT0001180009
Tumor
-0.8
CPT0012550003
Tumor
-0.8
CPT0001500009
Tumor
-0.8
CPT0006440003
Tumor
-0.8
CPT0079270003
Tumor
-0.8
CPT0002270011
Tumor
-0.9
CPT0089460004
Tumor
-0.9
CPT0010110003
Tumor
-0.9
CPT0012370003
Tumor
-1.0
CPT0086360003
Tumor
-1.0
CPT0026410003
Tumor
-1.1
CPT0086950003
Tumor
-1.1
CPT0078830003
Tumor
-1.1
CPT0025050003
Tumor
-1.2
CPT0065810003
Tumor
-1.2
CPT0001540009
Tumor
-1.2
CPT0079180003
Tumor
-1.3
CPT0078930003
Tumor
-1.3
CPT0015730003
Tumor
-1.3
CPT0024670003
Tumor
-1.4
CPT0014450004
Tumor
-1.4
CPT0012180003
Tumor
-1.5
CPT0078800003
Tumor
-1.6
CPT0078990003
Tumor
-1.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
