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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
663.8
nTPM
GTEx:
663.8
nTPM
FANTOM5:
2468.8
Scaled Tags Per Million
Pig:
239.5
nTPM
Mouse:
617.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
663.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 663.8
Samples: 105
Max nTPM: 2279.2
Min nTPM: 93.9
Std nTPM: 278.5
Median nTPM:
99_1
64 years, male
2279.2
218_1
71 years, female
1229.6
319_1
81 years, male
1143.0
452_1
88 years, female
1139.8
384_1
83 years, male
1038.0
379_1
60 years, male
990.0
351_1
91 years, male
983.4
173_1
67 years, male
959.9
349_1
83 years, male
955.8
322_1
76 years, male
951.4
353_1
82 years, female
924.1
317_1
60 years, male
923.9
41_1
94 years, female
904.7
480_1
63 years, male
887.6
295_1
61 years, female
886.6
386_1
76 years, male
884.8
377_1
82 years, female
883.5
321_1
62 years, female
881.0
354_1
81 years, female
880.4
447_1
81 years, male
873.2
318_1
68 years, male
852.3
2_1
77 years, female
850.2
348_1
84 years, male
832.9
163_1
78 years, male
832.8
237_1
82 years, male
825.1
293_1
68 years, female
803.0
243_1
75 years, male
788.6
320_1
89 years, female
785.7
6_1
73 years, female
781.8
352_1
62 years, male
775.1
375_1
74 years, female
765.4
189_1
76 years, male
762.9
137_1
83 years, male
755.6
389_1
86 years, female
753.4
311_1
78 years, male
745.9
355_1
70 years, female
745.9
251_1
78 years, male
745.6
526_1
61 years, male
745.0
350_1
84 years, female
744.9
506_1
65 years, male
730.8
177_1
74 years, male
729.0
347_1
72 years, male
724.0
4_1
88 years, female
719.1
405_1
91 years, male
718.2
394_1
75 years, female
716.4
376_1
75 years, female
711.3
153_1
70 years, female
707.3
308_1
70 years, female
704.3
229_1
69 years, female
701.7
264_1
73 years, female
698.8
172_1
72 years, female
690.4
406_1
79 years, male
685.3
316_1
62 years, male
680.9
265_1
87 years, male
665.1
17_1
71 years, male
664.1
335_1
73 years, female
662.6
286_1
68 years, female
662.3
356_1
87 years, female
656.7
396_1
62 years, male
650.1
291_1
76 years, male
648.6
404_1
82 years, female
644.6
9_1
66 years, female
637.9
35_1
74 years, female
622.7
307_1
66 years, female
616.8
120_1
70 years, female
615.4
314_1
67 years, male
609.8
503_1
68 years, male
598.1
145_1
84 years, male
585.3
115_1
83 years, male
584.0
292_1
71 years, male
583.8
42_1
85 years, male
565.3
254_1
77 years, female
559.3
246_1
77 years, male
553.3
425_1
59 years, female
551.2
517_1
88 years, male
545.0
81_1
67 years, male
540.5
18_1
88 years, male
523.6
117_1
61 years, male
488.8
109_1
81 years, female
482.9
126_1
63 years, male
482.3
518_1
75 years, female
478.9
139_1
64 years, female
471.7
495_1
57 years, female
448.2
288_1
66 years, female
441.5
324_1
76 years, male
439.2
313_1
79 years, female
438.6
468_1
89 years, male
427.1
266_1
85 years, male
425.7
119_1
70 years, female
409.3
315_1
62 years, female
394.6
499_1
55 years, female
393.2
217_1
76 years, male
390.7
162_1
79 years, female
347.8
142_1
61 years, female
327.8
43_1
64 years, female
323.5
466_1
57 years, female
302.4
32_1
67 years, male
291.1
89_1
63 years, male
279.3
415_1
77 years, female
261.7
501_1
88 years, male
240.2
414_1
84 years, female
216.6
149_1
88 years, male
200.8
490_1
67 years, female
137.5
491_1
89 years, female
110.8
413_1
59 years, female
93.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.