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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TTC39A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
103.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
63.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
47.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
43.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
40.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
38.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
38.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
37.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
36.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
31.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
29.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
28.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
25.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
25.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
23.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
23.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
21.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
19.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
18.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
17.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
17.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
17.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
17.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
17.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
17.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
17.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
16.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
15.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
15.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
14.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
13.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
13.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
13.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
12.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
11.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
11.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
11.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
11.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
11.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
11.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
10.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
10.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
9.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
9.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
8.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
7.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
5.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
5.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
4.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
4.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
3.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TTC39A is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
187.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
158.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
143.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
140.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
133.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
133.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
116.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
109.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
102.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
100.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
99.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
98.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
97.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
94.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
92.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
89.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
87.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
87.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
85.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
85.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
83.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
81.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
80.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
78.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
77.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
72.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
70.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
68.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
68.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
67.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
67.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
66.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
64.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
63.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
63.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
63.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
63.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
63.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
63.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
61.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
60.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
60.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
59.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
59.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
59.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
58.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
58.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
57.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
56.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
55.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
55.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
55.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
54.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
54.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
53.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
53.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
52.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
52.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
52.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
51.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
51.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
51.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
50.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
49.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
49.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
49.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
49.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
48.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
48.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
48.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
47.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
47.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
47.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
46.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
46.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
46.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
46.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
46.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
46.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
45.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
42.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
42.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
42.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
42.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
41.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
41.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
41.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
41.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
41.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
41.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
40.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
40.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
40.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
40.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
40.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
39.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
39.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
39.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
39.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
39.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
39.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
39.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
38.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
38.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
38.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
38.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
37.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
37.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
37.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
37.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
37.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
37.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
36.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
36.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
36.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
36.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
36.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
36.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
35.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
35.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
35.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
34.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
34.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
34.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
34.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
34.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
34.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
33.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
33.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
33.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
33.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
33.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
33.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
32.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
32.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
32.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
31.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
31.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
31.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
31.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
31.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
31.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
31.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
31.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
30.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
30.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
30.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
30.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
30.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
30.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
30.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
29.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
29.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
29.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
29.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
29.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
29.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
29.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
29.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
29.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
29.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
28.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
28.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
28.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
28.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
28.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
27.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
27.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
27.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
27.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
27.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
27.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
26.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
26.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
26.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
26.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
26.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
26.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
26.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
26.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
26.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
26.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
26.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
26.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
26.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
26.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
25.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
25.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
25.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
25.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
25.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
25.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
25.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
25.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
25.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
25.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
25.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
25.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
25.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
25.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
25.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
24.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
24.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
24.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
24.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
24.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
24.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
24.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
24.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
24.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
24.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
24.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
23.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
23.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
23.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
23.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
23.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
23.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
23.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
23.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
23.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
22.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
22.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
22.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
22.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
22.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
22.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
22.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
22.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
22.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
22.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
21.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
21.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
21.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
21.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
21.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
21.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
21.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
21.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
21.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
21.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
21.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
21.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
21.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
21.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
21.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
21.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
21.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
20.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
20.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
20.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
20.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
20.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
20.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
20.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
20.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
20.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
19.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
19.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
19.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
19.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
19.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
19.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
19.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
19.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
19.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
19.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
19.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
19.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
19.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
19.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
19.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
18.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
18.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
18.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
18.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
18.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
18.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
18.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
18.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
18.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
18.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
18.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
18.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
18.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
18.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
18.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
17.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
17.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
17.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
17.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
17.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
17.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
17.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
17.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
17.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
17.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
17.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
17.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
17.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
17.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
17.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
17.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
17.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
17.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
17.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
16.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
16.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
16.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
16.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
16.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
16.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
16.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
16.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
16.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
16.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
16.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
16.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
16.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
16.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
16.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
16.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
16.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
16.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
16.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
16.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
15.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
15.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
15.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
15.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
15.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
15.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
15.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
15.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
15.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
15.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
15.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
15.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
15.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
15.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
15.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
15.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
15.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
14.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
14.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
14.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
14.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
14.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
14.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
14.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
14.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
14.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
14.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
13.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
13.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
13.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
13.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
13.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
13.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
13.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
13.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
13.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
13.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
13.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
13.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
13.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
13.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
13.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
13.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
13.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
12.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
12.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
12.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
12.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
12.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
12.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
12.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
12.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
11.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
11.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
11.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
11.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
11.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
11.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
11.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
11.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
11.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
11.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
11.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
11.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
11.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
11.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
11.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
10.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
10.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
10.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
10.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
10.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
9.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
9.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
9.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
9.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
9.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
9.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
9.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
9.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
9.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
9.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
9.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
9.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
8.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
8.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
8.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
8.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
8.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
8.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
8.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
8.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
7.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
7.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
7.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
7.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
7.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
7.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
7.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
7.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
6.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
6.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
6.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
6.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
6.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
6.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
6.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
6.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
5.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
5.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
5.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
5.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
5.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
5.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
5.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
5.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
4.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
4.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
4.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
4.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
4.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
4.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
4.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
4.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
4.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
4.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
4.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
3.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
3.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
3.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
3.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
3.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
3.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
2.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
2.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
1.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
1.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
0.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TTC39A is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
185.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
143.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
140.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
112.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
108.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
95.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
93.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
91.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
90.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
75.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
61.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
61.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
59.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
57.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
55.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
53.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
51.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
51.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
49.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
44.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
42.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
41.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
39.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
38.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
37.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
37.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
36.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
36.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
36.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
35.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
35.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
35.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
34.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
32.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
30.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
30.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
30.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
29.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
29.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
26.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
26.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
24.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
23.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
23.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
22.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
21.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
21.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
21.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
21.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
21.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
20.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
20.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
20.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
19.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
19.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
19.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
18.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
18.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
18.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
17.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
17.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
16.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
15.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
15.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
15.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
15.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
14.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
11.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
11.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
11.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
11.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
11.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
10.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
10.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
10.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
10.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
9.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
7.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
7.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
7.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
7.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
6.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
5.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
5.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
5.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
4.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
4.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
4.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TTC39A is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
328.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
195.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
162.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
159.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
143.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
143.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
133.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
132.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
130.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
124.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
119.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
115.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
113.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
108.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
107.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
105.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
96.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
93.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
89.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
84.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
77.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
75.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
74.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
74.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
70.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
69.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
69.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
66.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
66.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
62.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
61.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
60.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
60.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
59.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
57.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
55.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
55.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
54.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
54.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
54.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
54.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
53.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
53.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
53.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
53.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
51.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
51.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
50.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
50.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
50.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
50.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
50.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
49.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
49.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
48.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
48.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
47.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
47.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
47.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
47.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
46.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
45.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
45.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
45.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
44.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
43.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
43.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
43.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
43.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
43.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
43.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
43.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
43.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
43.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
43.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
42.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
42.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
42.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
42.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
41.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
41.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
41.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
40.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
40.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
39.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
39.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
39.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
39.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
39.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
39.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
38.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
38.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
38.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
38.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
37.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
37.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
37.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
37.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
37.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
37.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
37.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
36.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
36.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
36.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
36.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
36.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
36.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
36.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
35.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
35.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
35.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
35.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
35.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
35.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
34.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
34.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
34.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
34.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
34.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
34.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
33.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
33.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
33.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
33.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
33.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
33.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
33.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
32.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
32.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
32.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
32.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
32.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
32.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
32.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
32.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
31.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
31.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
31.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
31.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
31.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
31.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
31.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
31.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
30.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
29.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
29.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
29.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
29.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
29.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
29.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
29.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
28.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
28.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
28.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
28.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
28.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
28.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
28.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
28.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
27.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
27.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
27.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
27.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
27.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
27.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
26.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
26.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
26.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
26.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
26.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
26.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
26.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
25.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
25.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
25.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
25.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
25.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
25.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
25.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
25.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
24.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
24.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
24.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
24.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
24.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
24.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
24.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
24.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
23.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
23.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
23.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
23.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
23.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
23.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
23.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
23.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
23.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
23.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
22.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
22.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
22.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
22.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
22.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
21.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
21.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
21.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
21.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
21.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
21.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
21.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
21.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
20.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
20.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
20.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
20.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
20.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
20.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
19.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
19.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
19.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
19.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
19.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
19.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
19.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
18.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
18.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
18.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
18.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
17.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
17.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
16.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
16.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
16.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
16.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
16.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
16.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
15.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
15.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
15.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
14.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
14.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
14.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
14.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
14.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
13.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
13.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
13.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
13.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
13.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
13.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
12.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
12.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
12.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
12.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
11.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
11.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
11.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
11.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
11.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
10.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
9.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
9.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
7.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
7.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
2.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0065430003
Tumor
1.7
CPT0007320003
Tumor
1.5
CPT0020120003
Tumor
1.4
CPT0086360003
Tumor
1.4
CPT0081880003
Tumor
1.3
CPT0015810003
Tumor
1.3
CPT0086030003
Tumor
1.2
CPT0001500009
Tumor
1.2
CPT0009060003
Tumor
1.2
CPT0088480003
Tumor
1.1
CPT0001540009
Tumor
1.1
CPT0025050003
Tumor
1.1
CPT0075130003
Tumor
1.1
CPT0089460004
Tumor
1.1
CPT0026410003
Tumor
1.1
CPT0012280003
Tumor
1.0
CPT0065810003
Tumor
1.0
CPT0025580004
Tumor
0.9
CPT0086820003
Tumor
0.9
CPT0064370003
Tumor
0.9
CPT0019130003
Tumor
0.8
CPT0088970003
Tumor
0.8
CPT0025110003
Tumor
0.8
CPT0065750003
Tumor
0.8
CPT0078990003
Tumor
0.8
CPT0012080003
Tumor
0.8
CPT0009000003
Tumor
0.8
CPT0079410003
Tumor
0.7
CPT0012550003
Tumor
0.7
CPT0012670003
Tumor
0.6
CPT0025230003
Tumor
0.6
CPT0015730003
Tumor
0.6
CPT0000870016
Tumor
0.6
CPT0014450004
Tumor
0.6
CPT0002350011
Tumor
0.6
CPT0078800003
Tumor
0.6
CPT0065930003
Tumor
0.6
CPT0010110003
Tumor
0.6
CPT0000640003
Tumor
0.5
CPT0079480003
Tumor
0.5
CPT0019990003
Tumor
0.5
CPT0012180003
Tumor
0.5
CPT0063320003
Tumor
0.5
CPT0071150004
Tumor
0.5
CPT0076330003
Tumor
0.5
CPT0002270011
Tumor
0.4
CPT0088690003
Tumor
0.4
CPT0063630003
Tumor
0.4
CPT0021240003
Tumor
0.4
CPT0077490003
Tumor
0.4
CPT0014160003
Tumor
0.4
CPT0012900004
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0001190001
Normal
0.2
CPT0077310003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0078930003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0001340003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0078510003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0086950003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0081600003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0088900003
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0069190001
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0024670003
Tumor
-0.2
CPT0079180003
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0089040001
Normal
-0.3
CPT0017450001
Normal
-0.3
CPT0079380003
Tumor
-0.3
CPT0075170001
Normal
-0.3
CPT0012370003
Tumor
-0.3
CPT0085670003
Tumor
-0.3
CPT0001270001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0092160003
Tumor
-0.3
CPT0092730003
Tumor
-0.4
CPT0001180009
Tumor
-0.4
CPT0079510001
Normal
-0.4
CPT0025170003
Tumor
-0.4
CPT0088570001
Normal
-0.4
CPT0069160003
Tumor
-0.4
CPT0077320001
Normal
-0.4
CPT0088500001
Normal
-0.4
CPT0025880003
Tumor
-0.4
CPT0092190003
Normal
-0.4
CPT0088920001
Normal
-0.4
CPT0063640001
Normal
-0.5
CPT0063330001
Normal
-0.5
CPT0014470001
Normal
-0.5
CPT0010120001
Normal
-0.5
CPT0006530001
Normal
-0.5
CPT0026420001
Normal
-0.5
CPT0025290003
Tumor
-0.5
CPT0012090003
Normal
-0.5
CPT0088760003
Tumor
-0.5
CPT0086890003
Normal
-0.5
CPT0001550001
Normal
-0.6
CPT0018250001
Normal
-0.6
CPT0092310003
Normal
-0.6
CPT0082010001
Normal
-0.6
CPT0092800003
Normal
-0.6
CPT0069000003
Tumor
-0.6
CPT0087050003
Normal
-0.6
CPT0088710001
Normal
-0.6
CPT0086970003
Normal
-0.6
CPT0012920003
Normal
-0.6
CPT0078530001
Normal
-0.6
CPT0088640003
Normal
-0.6
CPT0012640003
Normal
-0.6
CPT0066520001
Normal
-0.6
CPT0064400001
Normal
-0.6
CPT0025610001
Normal
-0.6
CPT0024680001
Normal
-0.6
CPT0010170001
Normal
-0.6
CPT0078660003
Tumor
-0.6
CPT0081620001
Normal
-0.6
CPT0089480003
Normal
-0.6
CPT0012770003
Normal
-0.7
CPT0013790003
Normal
-0.7
CPT0014130001
Normal
-0.7
CPT0009020003
Normal
-0.7
CPT0079000001
Normal
-0.7
CPT0002370001
Normal
-0.7
CPT0012290003
Normal
-0.7
CPT0009080003
Normal
-0.7
CPT0006950001
Normal
-0.7
CPT0025060001
Normal
-0.7
CPT0000790001
Normal
-0.7
CPT0006730001
Normal
-0.7
CPT0088780001
Normal
-0.7
CPT0079300001
Normal
-0.7
CPT0078840001
Normal
-0.7
CPT0078940001
Normal
-0.7
CPT0000660001
Normal
-0.7
CPT0001510001
Normal
-0.7
CPT0001230001
Normal
-0.7
CPT0086830003
Normal
-0.7
CPT0086370003
Normal
-0.8
CPT0065820001
Normal
-0.8
CPT0000890001
Normal
-0.8
CPT0023360001
Normal
-0.8
CPT0014350001
Normal
-0.8
CPT0020130001
Normal
-0.8
CPT0007870001
Normal
-0.8
CPT0081990003
Tumor
-0.8
CPT0019160001
Normal
-0.9
CPT0078670001
Normal
-0.9
CPT0084560003
Tumor
-0.9
CPT0065450001
Normal
-0.9
CPT0077140001
Normal
-0.9
CPT0023710001
Normal
-0.9
CPT0077500001
Normal
-0.9
CPT0069010001
Normal
-0.9
CPT0025920001
Normal
-1.0
CPT0007470001
Normal
-1.0
CPT0020020001
Normal
-1.0
CPT0066430001
Normal
-1.1
CPT0065870003
Tumor
-1.1
CPT0092740003
Normal
-1.2
CPT0088630003
Tumor
-1.3
CPT0088550004
Tumor
-2.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.