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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
68.6
nTPM
HPA Brain:
55.9
nTPM
GTEx:
68.6
nTPM
FANTOM5:
43.7
Scaled Tags Per Million
Pig:
42.3
nTPM
Mouse:
73.2
nTPM
Allen mouse:
3.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
55.9
Sample id
Sample description
nTPM
Amygdala nTPM: 55.9
2514
Male, age 75, right hemisphere
62.6
1987
Female, age 91, left hemisphere
59.5
2814
Male, age 76, right hemisphere
56.7
2695
Female, age 67, right hemisphere
55.7
2517
Female, age 94, left hemisphere
44.9
Basal amygdala nTPM: 44.4
2609
Male, age 75, right hemisphere
50.5
2110
Male, age 80, left hemisphere
48.4
1955
Male, age 76, both hemispheres
47.3
2685
Female, age 94, left hemisphere
46.1
2243
Female, age 91, right hemisphere
44.6
2827
Female, age 67, right hemisphere
29.8
Central amygdala nTPM: 49.6
2826
Female, age 94, left hemisphere
54.3
1905
Male, age 76, both hemispheres
52.9
2515
Male, age 75, right hemisphere
50.9
2701
Female, age 91, right hemisphere
47.6
2239
Male, age 80, left hemisphere
42.4
Corticomedial amygdala nTPM: 44.3
2829
Male, age 80, left hemisphere
55.2
2428
Male, age 75, right hemisphere
54.3
2242
Female, age 91, right hemisphere
48.8
2240
Male, age 76, both hemispheres
42.0
2429
Female, age 94, left hemisphere
39.9
2535
Female, age 67, right hemisphere
25.5
Lateral amygdala nTPM: 45.6
1883
Male, age 76, both hemispheres
58.5
2534
Female, age 94, left hemisphere
54.7
2516
Male, age 75, right hemisphere
48.8
2255
Female, age 91, right hemisphere
40.2
2256
Male, age 80, left hemisphere
38.4
2830
Female, age 67, right hemisphere
32.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
68.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 68.6
Samples: 152
Max nTPM: 119.2
Min nTPM: 38.7
Std nTPM: 12.6
Median nTPM: 66.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
119.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
113.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
108.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
101.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
101.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
98.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
94.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
91.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
90.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
89.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
88.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
87.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
86.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
86.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
85.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
84.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
83.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
83.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
83.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
82.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
81.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
80.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
78.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
78.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
78.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
77.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
77.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
77.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
76.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
76.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
76.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
76.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
76.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
75.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
75.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
75.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
75.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
75.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
74.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
74.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
74.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
74.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
73.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
73.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
73.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
73.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
73.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
71.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
71.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
71.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
71.3
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
70.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
70.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
70.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
70.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
69.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
69.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
69.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
68.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
68.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
68.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
68.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
68.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
68.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
68.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
68.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
67.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
67.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
67.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
67.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
67.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
66.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
66.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
66.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
66.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
66.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
65.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
65.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
65.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
65.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
65.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
65.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
65.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
65.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
65.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
64.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
64.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
64.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
64.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
64.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
64.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
64.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
63.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
63.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
63.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
63.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
63.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
63.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
63.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
62.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
62.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
62.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
62.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
61.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
61.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
61.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
61.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
61.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
61.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
61.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
60.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
60.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
60.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
60.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
60.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
60.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
60.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
60.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
59.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
59.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
59.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
59.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
59.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
59.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
58.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
58.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
58.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
58.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
57.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
57.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
57.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
57.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
57.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
56.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
56.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
56.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
55.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
55.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
55.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
54.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
54.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
54.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
53.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
53.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
52.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
51.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
50.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
48.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
48.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
48.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
47.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
38.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
73.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 73.2
Samples: 4
Max nTPM: 76.4
Min nTPM: 70.9
Sample A
Male
74.1
Sample B
Male
76.4
Sample C
Female
71.2
Sample D
Female
70.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.