HIPPOCAMPAL FORMATION - Expression summary
Mouse brain, Intensity
Hippocampal formationi 		104.582
Protein expressioni No data
RNA expressioni
Consensus:19.4 nTPM
HPA Brain:51.5 nTPM
GTEx:19.4 nTPM
FANTOM5:168.8 Scaled Tags Per Million
Pig:74.1 nTPM
Mouse:130.8 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB079009
Hippocampal formation mean intensity 104.582
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 95.689
Molecular layer of the dentate gyrus 67.928
Granular dentate gyrus 33.666
CA1 - oriens layer 53.260
CA1 - pyramidal layer 32.025
CA1 - radiatum layer 62.767
CA2 - oriens layer 58.721
CA2 - pyramidal layer 34.207
CA2 - radiatum layer 69.098
CA3 - oriens layer 71.199
CA3 - pyramidal layer 39.607
CA3 - radiatum layer 82.600
Stratum lucidum 75.386
Lacunosum moleculare 47.950
Subiculum 54.939

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 51.5
Sample id Sample description nTPM
Hippocampus
nTPM: 43.3
1898 Male, age 80, left hemisphere 56.9
1855 Male, age 76, left hemisphere 45.3
1911 Female, age 85, right hemisphere 42.4
2529 Female, age 94, left hemisphere 40.1
2621 Female, age 67, right hemisphere 38.6
2148 Female, age 91, left hemisphere 36.3
Dentate gyrus
nTPM: 45.9
1927 Female, age 91, both hemispheres 59.4
2010 Male, age 76, both hemispheres 46.4
2530 Female, age 94, left hemisphere 46.0
2528 Male, age 74, both hemispheres 45.0
2246 Female, age 85, both hemispheres 42.4
2531 Female, age 67, both hemispheres 36.4
Entorhinal gyrus
nTPM: 39.8
1938 Female, age 85, left hemisphere 51.0
1787 Male, age 76, left hemisphere 41.0
2764 Male, age 80, right hemisphere 40.1
2613 Female, age 94, left hemisphere 38.5
2686 Male, age 75, right hemisphere 34.5
2117 Female, age 91, right hemisphere 33.3
Hippocampus, CA1
nTPM: 49.4
2749 Male, age 80, left hemisphere 66.2
1873 Female, age 85, both hemispheres 55.3
2045 Male, age 76, both hemispheres 49.3
2527 Male, age 74, both hemispheres 38.8
2082 Female, age 91, right hemisphere 37.5
Hippocampus, CA2
nTPM: 47.5
1892 Male, age 76, both hemispheres 65.2
1963 Male, age 80, left hemisphere 55.1
2249 Male, age 74, both hemispheres 48.6
2437 Female, age 94, left hemisphere 40.7
1940 Female, age 85, left hemisphere 40.2
2113 Female, age 91, right hemisphere 35.4
Hippocampus, CA3
nTPM: 45.1
2137 Male, age 80, left hemisphere 53.2
1867 Male, age 76, both hemispheres 51.2
2436 Male, age 74, both hemispheres 50.6
1891 Female, age 85, both hemispheres 44.7
2620 Female, age 94, left hemisphere 38.7
2861 Female, age 67, both hemispheres 32.1
Parahippocampal cortex
nTPM: 43.0
1850 Male, age 80, both hemispheres 58.3
1990 Female, age 91, right hemisphere 50.3
1933 Female, age 85, both hemispheres 50.1
2693 Female, age 94, both hemispheres 46.6
2250 Female, age 67, right hemisphere 43.5
2245 Female, age 91, both hemispheres 39.4
2532 Female, age 72, left hemisphere 38.1
2692 Male, age 74, both hemispheres 37.3
2018 Male, age 76, both hemispheres 35.5
2622 Female, age 67, right hemisphere 30.6
Perirhinal gyrus
nTPM: 51.5
1841 Female, age 85, right hemisphere 57.4
1847 Female, age 91, left hemisphere 54.7
1794 Male, age 80, right hemisphere 53.9
2521 Female, age 94, right hemisphere 49.5
2848 Male, age 76, right hemisphere 42.0
Subiculum
nTPM: 39.2
1977 Female, age 85, both hemispheres 49.5
1901 Male, age 80, both hemispheres 44.9
2438 Female, age 94, left hemisphere 38.3
2619 Male, age 74, both hemispheres 35.1
2729 Female, age 91, right hemisphere 34.9
2042 Male, age 76, both hemispheres 32.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 19.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.4
Samples: 197

Max nTPM: 44.9
Min nTPM: 6.2
Std nTPM: 6.7
Median nTPM: 18.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 44.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 37.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 37.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 36.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 34.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 33.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 33.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 31.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 31.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 31.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 30.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 168.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 168.8
FF:10169-103B7 60 years, female 251.3
FF:10153-102I9 76 years, female 86.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 74.1
Pig sample Sample description nTPM
Subiculum
nTPM: 60.2
Samples: 4

Max nTPM: 76.1
Min nTPM: 54.0
Sample A Female 76.1
Sample B Female 54.0
Sample C Male 54.7
Sample D Male 56.1
Dorsal hippocampus
nTPM: 74.1
Samples: 4

Max nTPM: 88.0
Min nTPM: 61.3
Sample A Female 88.0
Sample B Female 78.7
Sample C Male 68.5
Sample D Male 61.3
Entorhinal cortex
nTPM: 58.3
Samples: 4

Max nTPM: 66.8
Min nTPM: 49.6
Sample A Female 59.0
Sample B Female 66.8
Sample C Male 57.6
Sample D Male 49.6
Ventral hippocampus
nTPM: 59.1
Samples: 4

Max nTPM: 70.4
Min nTPM: 48.3
Sample A Female 70.4
Sample B Female 48.3
Sample C Male 53.3
Sample D Male 64.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 130.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 126.8
Samples: 4

Max nTPM: 149.5
Min nTPM: 115.4
Sample A Male 115.4
Sample B Male 121.2
Sample C Female 120.9
Sample D Female 149.5
Hippocampal formation
nTPM: 130.8
Samples: 4

Max nTPM: 143.2
Min nTPM: 121.1
Sample A Male 129.3
Sample B Male 129.4
Sample C Female 143.2
Sample D Female 121.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
69169714 Antisense, RP_050321_04_B01, Mouse strain C57BL/6J (56 days, male) 1.0

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