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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS5 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1995.6
Number of samples
349
Samples
Sample
Description
TPM
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
19164.6
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
7437.1
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
6439.4
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
6109.9
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
5728.2
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
5373.0
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
5274.4
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
4972.7
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
4891.2
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
4738.9
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
4584.1
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
4235.2
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
4176.0
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
3989.6
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
3863.0
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
3841.7
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
3784.7
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
3746.6
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
3706.6
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
3689.5
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
3629.3
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
3613.6
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
3575.2
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
3502.2
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
3493.0
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
3487.0
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
3478.3
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
3462.9
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
3354.7
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
3319.4
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
3300.6
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
3293.8
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
3287.1
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
3252.0
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
3250.0
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
3244.8
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
3195.0
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
3174.6
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
3152.2
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
3150.4
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
3120.0
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
3115.4
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
3080.4
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
3054.7
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
3035.7
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
3015.0
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
3013.1
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
3010.9
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
2962.2
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
2955.1
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
2950.0
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
2949.9
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
2941.6
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
2930.0
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
2919.6
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
2903.6
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
2890.0
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
2885.4
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
2863.6
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
2857.3
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
2830.9
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
2820.1
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
2819.9
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
2801.4
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
2781.6
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
2770.4
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
2758.7
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
2734.3
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
2731.9
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
2725.4
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
2720.5
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
2664.4
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
2651.3
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
2648.4
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
2644.7
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
2642.3
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
2639.6
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
2635.2
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
2631.2
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
2599.8
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
2591.7
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
2586.9
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
2570.3
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
2559.9
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
2538.2
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
2537.5
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
2531.5
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
2521.1
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
2502.9
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
2501.8
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
2488.3
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
2430.8
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
2424.0
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
2413.8
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
2383.8
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
2379.7
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
2368.5
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
2367.4
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
2362.7
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
2355.3
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
2347.3
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
2343.2
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
2321.8
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
2315.9
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
2312.0
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
2300.4
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
2299.2
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
2287.5
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
2285.8
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
2282.0
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
2279.8
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
2271.1
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
2246.2
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
2244.1
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
2242.6
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
2239.1
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
2235.5
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
2224.7
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
2213.0
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
2210.4
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
2201.1
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
2193.6
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
2193.0
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
2190.5
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
2183.0
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
2180.4
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
2175.9
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
2173.8
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
2171.1
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
2169.2
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
2166.7
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
2163.9
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
2138.0
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
2134.7
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
2120.9
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
2109.6
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
2051.6
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
2036.7
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
2024.0
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
2015.3
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
1995.8
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1977.5
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
1972.0
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
1956.8
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
1946.8
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
1912.6
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
1907.6
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
1889.5
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
1854.8
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
1830.9
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
1821.5
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
1820.7
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
1817.8
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
1814.2
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1809.5
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
1804.2
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
1801.6
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
1801.2
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
1800.4
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
1797.8
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
1797.5
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
1796.3
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
1788.6
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
1782.4
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
1774.5
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
1771.9
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
1767.1
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
1758.1
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
1756.8
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
1751.8
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
1750.0
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
1734.1
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
1732.2
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
1730.1
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
1719.4
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
1703.0
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
1696.8
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
1695.0
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
1694.5
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
1684.4
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
1678.6
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
1666.4
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
1662.4
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
1662.0
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
1658.7
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
1651.9
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
1636.1
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1635.8
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
1612.9
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
1600.9
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
1596.5
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
1586.7
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
1574.4
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
1573.5
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
1573.4
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
1563.6
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
1561.2
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
1560.7
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
1559.1
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
1557.2
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1556.0
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
1554.9
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
1553.3
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
1552.1
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
1549.8
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
1543.5
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1541.3
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
1532.5
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
1512.2
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
1510.0
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
1506.4
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
1499.5
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
1494.1
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
1489.9
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
1482.8
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
1477.4
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
1474.3
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
1465.7
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
1464.1
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1455.6
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
1446.5
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
1422.9
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
1418.2
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
1416.3
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
1401.5
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
1401.4
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
1393.5
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
1386.3
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
1386.2
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
1385.0
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
1382.7
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
1382.4
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
1378.2
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
1376.8
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
1375.9
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
1371.7
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
1368.7
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
1368.7
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1356.0
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
1355.6
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
1350.1
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
1349.6
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
1343.7
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
1340.5
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
1331.2
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
1324.5
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
1313.2
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
1310.0
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
1305.8
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
1294.8
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
1292.7
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
1280.6
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
1274.9
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
1274.5
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
1268.7
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
1259.3
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
1254.6
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
1246.7
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
1233.1
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
1233.1
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
1220.0
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
1219.0
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
1211.1
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
1204.8
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
1194.3
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
1194.3
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
1194.1
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
1189.0
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
1172.4
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
1167.6
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
1147.1
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
1124.3
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
1113.9
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
1105.5
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
1105.1
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
1100.1
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
1088.3
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
1082.0
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
1069.7
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
1066.2
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
1053.7
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
1052.7
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
1040.0
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
1036.1
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
1035.3
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1030.6
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
1027.5
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
1021.4
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1018.5
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
1013.0
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
1004.8
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
997.2
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
994.4
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
986.7
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
984.5
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
982.2
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
979.2
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
975.7
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
970.9
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
949.8
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
949.3
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
948.8
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
939.6
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
939.4
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
932.8
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
924.6
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
920.6
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
917.9
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
917.1
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
898.7
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
896.8
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
892.6
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
884.7
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
880.3
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
861.4
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
850.8
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
849.0
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
824.0
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
822.3
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
815.9
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
814.4
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
810.6
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
809.9
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
808.3
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
792.4
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
782.4
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
771.0
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
762.3
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
730.8
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
706.9
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
701.2
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
696.0
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
667.1
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
642.3
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
640.4
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
638.9
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
628.5
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
624.4
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
607.5
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
595.6
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
588.1
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
564.7
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
561.1
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
545.8
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
522.6
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
522.1
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
495.5
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
408.7
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS5 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1488.3
Number of samples
81
Samples
Sample
Description
TPM
DO46333
0 years, female, NA, stage:III, dead, 359 days
4747.7
DO46384
0 years, female, NA, stage:III, dead, 614 days
4278.1
DO46453
0 years, female, NA, stage:III, dead, 3294 days
3680.0
DO46551
0 years, female, NA, stage:III, dead, 1055 days
3278.8
DO46611
0 years, female, NA, stage:III, dead, 734 days
3180.6
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
2988.5
DO46568
0 years, female, NA, stage:III, dead, 320 days
2669.3
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
2654.4
DO46576
0 years, female, NA, stage:III, alive, 133 days
2614.9
DO46331
0 years, female, NA, stage:III, dead, 612 days
2581.1
DO46390
0 years, female, NA, stage:III, dead, 374 days
2492.0
DO46402
0 years, female, NA, stage:III, dead, 511 days
2311.6
DO46370
0 years, female, NA, stage:III, dead, 1727 days
2175.5
DO46378
0 years, female, NA, stage:III, alive, 843 days
2062.6
DO46352
0 years, female, NA, stage:III, dead, 677 days
2026.5
DO46366
0 years, female, NA, stage:III, dead, 2054 days
1949.9
DO46386
0 years, female, NA, stage:III, dead, 1162 days
1922.0
DO46463
0 years, female, NA, stage:III, dead, 2451 days
1874.1
DO46388
0 years, female, NA, stage:III, dead, 413 days
1854.5
DO46392
0 years, female, NA, stage:III, dead, 628 days
1813.6
DO46364
0 years, female, NA, stage:III, dead, 806 days
1776.1
DO46586
0 years, female, NA, stage:III, dead, 1019 days
1763.0
DO46528
0 years, female, NA, stage:III, alive, 6139 days
1697.6
DO46591
0 years, female, NA, stage:III, dead, 195 days
1683.2
DO46380
0 years, female, NA, stage:III, dead, 1423 days
1644.3
DO46400
0 years, female, NA, stage:III, dead, 719 days
1624.0
DO46338
0 years, female, NA, stage:III, dead, 596 days
1578.0
DO46566
0 years, female, NA, stage:III, dead, 673 days
1565.2
DO46326
0 years, female, NA, stage:III, dead, 701 days
1551.7
DO46350
0 years, female, NA, stage:III, dead, 886 days
1548.4
DO46334
0 years, female, NA, stage:III, dead, 496 days
1547.1
DO46358
0 years, female, NA, stage:III, dead, 423 days
1484.4
DO46432
0 years, female, NA, stage:III, alive, 2218 days
1462.1
DO46538
0 years, female, NA, stage:III, dead, 1527 days
1415.4
DO46561
0 years, female, NA, stage:III, dead, 195 days
1365.3
DO46356
0 years, female, NA, stage:III, dead, 911 days
1352.2
DO46493
0 years, female, NA, stage:IV, alive, 839 days
1350.8
DO46354
0 years, female, NA, stage:III, dead, 843 days
1312.8
DO46325
0 years, female, NA, stage:III, dead, 477 days
1303.8
DO46518
0 years, female, NA, stage:III, alive, 2960 days
1290.8
DO46372
0 years, female, NA, stage:III, dead, 1326 days
1270.5
DO46560
0 years, female, NA, stage:IV, dead, 286 days
1257.5
DO46328
0 years, female, NA, stage:III, dead, 972 days
1189.0
DO46581
0 years, female, NA, stage:III, dead, 408 days
1184.1
DO46533
0 years, female, NA, stage:III, alive, 3667 days
1174.8
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
1157.7
DO46330
0 years, female, NA, stage:III, dead, 684 days
1157.7
DO46382
0 years, female, NA, stage:IV, dead, 311 days
1152.1
DO46329
0 years, female, NA, stage:III, dead, 1699 days
1121.3
DO46508
0 years, female, NA, stage:III, dead, 2101 days
1110.4
DO46443
0 years, female, NA, stage:III, dead, 2464 days
1103.5
DO46342
0 years, female, NA, stage:III, dead, 1398 days
1101.1
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
1068.7
DO46412
0 years, female, NA, stage:III, dead, 597 days
1059.8
DO46368
0 years, female, NA, stage:III, dead, 2879 days
1058.6
DO46376
0 years, female, NA, stage:III, dead, 1430 days
1047.2
DO46597
0 years, female, NA, stage:III, dead, 393 days
1003.2
DO46408
0 years, female, NA, stage:III, dead, 489 days
989.8
DO46588
0 years, female, NA, stage:III, dead, 438 days
979.6
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
978.4
DO46398
0 years, female, NA, stage:III, alive, 437 days
957.8
DO46348
0 years, female, NA, stage:IV, dead, 287 days
937.9
DO46374
0 years, female, NA, stage:III, dead, 1409 days
901.5
DO46602
0 years, female, NA, stage:III, dead, 205 days
901.1
DO46571
0 years, female, NA, stage:III, dead, 243 days
885.4
DO46332
0 years, female, NA, stage:III, dead, 689 days
818.9
DO46396
0 years, female, NA, stage:III, dead, 583 days
799.8
DO46468
0 years, female, NA, stage:III, alive, 2776 days
797.8
DO46346
0 years, female, NA, stage:III, dead, 1187 days
786.8
DO46436
0 years, female, NA, stage:III, alive, 3193 days
774.9
DO46362
0 years, female, NA, stage:III, dead, 1639 days
733.2
DO46327
0 years, female, NA, stage:III, dead, 184 days
699.9
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
692.2
DO46344
0 years, female, NA, stage:III, dead, 642 days
677.2
DO46336
0 years, female, NA, stage:IV, dead, 664 days
656.2
DO46404
0 years, female, NA, stage:III, dead, 690 days
643.7
DO46448
0 years, female, NA, stage:III, dead, 654 days
635.8
DO46340
0 years, female, NA, stage:III, dead, 616 days
478.8
DO46606
0 years, female, NA, stage:III, alive, 804 days
463.5
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
361.1
DO46546
0 years, female, NA, stage:III, dead, 1889 days
312.5
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.2
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
0.1
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
0.0
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
-0.1
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-0.2
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
-0.2
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
-0.3
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-0.3
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
-0.4
285fed94-1495-448e-879b-b55de9_D2
Tumor
-0.4
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-0.4
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
-0.4
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
-0.5
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-0.5
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
-0.5
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
-0.5
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
-0.5
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.5
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
-0.5
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.5
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
-0.6
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
-0.6
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-0.6
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
-0.6
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-0.6
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-0.7
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.7
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.7
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
-0.7
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-0.7
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
-0.7
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-0.8
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
-0.8
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.8
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.8
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.8
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
-0.9
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.9
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-0.9
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-0.9
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-0.9
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-0.9
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-0.9
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-0.9
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-0.9
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-1.0
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-1.0
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-1.0
15524912-685a-47ce-a824-567848_D2
Tumor
-1.0
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-1.1
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-1.1
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-1.1
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-1.1
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-1.1
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-1.1
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-1.1
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-1.1
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-1.1
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-1.1
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
-1.1
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-1.1
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-1.2
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-1.2
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-1.2
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-1.2
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
-1.3
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-1.3
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-1.3
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-1.3
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-1.3
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
-1.3
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-1.3
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-1.4
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-1.4
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-1.4
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-1.4
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
-1.4
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-1.4
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-1.4
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
-1.5
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-1.5
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-1.5
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-1.5
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-1.5
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-1.6
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-1.6
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
-1.6
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-1.6
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-1.6
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-1.6
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-1.6
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-1.6
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-1.6
e9d416e7-f661-400a-896e-388545_D2
Tumor
-1.7
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-1.7
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
-1.7
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
-1.8
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-1.8
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-1.8
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-1.9
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-1.9
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-1.9
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-2.0
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-2.0
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-2.1
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-2.1
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-2.1
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-2.3
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.