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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
3.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
2.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LRP2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
265.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
252.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
196.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
162.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
158.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
157.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
157.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
149.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
146.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
145.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
145.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
137.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
136.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
136.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
136.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
136.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
116.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
109.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
106.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
103.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
93.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
91.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
91.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
90.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
88.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
87.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
86.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
84.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
83.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
79.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
78.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
76.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
75.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
75.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
73.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
72.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
71.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
70.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
70.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
70.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
68.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
68.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
68.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
68.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
68.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
65.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
65.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
64.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
64.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
62.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
61.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
60.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
60.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
59.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
59.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
59.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
58.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
58.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
58.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
58.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
57.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
57.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
57.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
56.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
56.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
56.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
56.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
55.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
54.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
54.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
54.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
54.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
54.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
54.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
52.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
52.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
51.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
51.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
51.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
51.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
50.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
49.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
49.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
48.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
48.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
48.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
48.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
48.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
48.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
47.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
47.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
47.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
45.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
45.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
45.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
45.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
45.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
44.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
44.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
44.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
44.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
44.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
43.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
42.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
41.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
41.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
41.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
40.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
40.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
40.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
40.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
39.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
38.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
38.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
38.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
38.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
38.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
37.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
37.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
37.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
37.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
37.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
36.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
36.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
36.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
36.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
36.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
36.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
35.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
34.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
34.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
34.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
34.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
34.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
34.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
33.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
33.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
33.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
33.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
33.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
33.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
33.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
32.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
32.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
32.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
32.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
31.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
31.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
31.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
31.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
31.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
31.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
31.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
30.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
30.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
30.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
30.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
30.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
30.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
30.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
29.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
29.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
29.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
28.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
28.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
28.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
28.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
28.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
28.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
28.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
28.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
28.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
28.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
27.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
27.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
27.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
27.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
27.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
27.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
27.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
27.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
27.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
27.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
27.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
27.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
27.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
27.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
27.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
26.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
26.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
26.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
26.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
26.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
25.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
25.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
25.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
25.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
25.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
25.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
25.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
24.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
24.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
24.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
24.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
24.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
23.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
23.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
23.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
23.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
23.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
23.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
23.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
22.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
22.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
22.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
22.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
22.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
22.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
22.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
22.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
21.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
21.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
21.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
21.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
21.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
21.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
21.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
20.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
20.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
20.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
20.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
20.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
20.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
20.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
20.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
19.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
19.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
19.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
19.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
19.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
19.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
19.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
19.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
19.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
19.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
19.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
18.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
18.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
18.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
18.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
18.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
18.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
18.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
18.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
18.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
18.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
18.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
17.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
17.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
17.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
17.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
17.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
17.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
17.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
17.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
17.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
17.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
17.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
16.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
16.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
16.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
16.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
16.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
16.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
16.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
16.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
16.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
16.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
15.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
15.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
15.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
15.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
15.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
15.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
15.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
15.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
15.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
15.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
15.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
15.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
14.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
14.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
14.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
14.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
14.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
13.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
13.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
13.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
13.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
12.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
12.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
12.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
12.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
12.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
12.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
12.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
12.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
12.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
12.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
12.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
12.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
11.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
11.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
11.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
11.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
11.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
11.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
11.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
10.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
10.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
10.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
10.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
10.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
10.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
10.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
10.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
10.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
10.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
9.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
9.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
9.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
9.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
9.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
9.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
9.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
8.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
8.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
8.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
8.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
8.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
8.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
8.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
7.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
7.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
7.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
7.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
7.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
7.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
7.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
7.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
7.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
6.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
6.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
6.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
6.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
5.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
5.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
5.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
5.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
5.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
5.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
5.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
5.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
4.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
4.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
4.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
4.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
4.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
4.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
4.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
3.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
3.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
3.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
3.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
3.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
3.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
3.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
3.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
3.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
3.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
3.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
3.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
3.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
2.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
2.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
2.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
2.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
2.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
2.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
2.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
2.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
2.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
2.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
2.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
2.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
1.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
1.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
1.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
1.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
1.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
1.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
1.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
1.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
1.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
1.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
1.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
1.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
1.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
1.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
0.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
0.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
0.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
0.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
0.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
0.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
0.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
0.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
0.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
0.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
0.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
0.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
0.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
0.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
0.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
0.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
0.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
0.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
0.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
0.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
0.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
0.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
0.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
0.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
0.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
0.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
0.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
0.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
0.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LRP2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
110.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
97.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
81.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
75.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
72.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
71.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
71.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
69.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
69.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
68.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
64.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
61.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
61.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
60.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
59.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
58.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
55.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
55.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
54.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
53.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
53.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
52.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
49.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
49.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
47.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
46.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
45.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
45.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
44.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
40.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
39.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
39.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
38.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
38.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
37.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
36.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
35.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
35.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
34.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
34.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
33.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
33.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
33.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
32.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
31.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
31.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
31.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
30.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
30.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
29.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
29.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
29.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
27.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
25.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
24.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
22.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
22.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
21.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
20.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
19.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
18.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
18.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
17.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
17.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
17.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
17.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
15.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
13.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
13.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
13.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
10.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
10.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
10.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
9.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
8.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
8.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
7.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
6.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
5.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
4.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
4.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
3.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
2.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
2.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
0.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
0.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
0.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
0.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
0.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
0.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LRP2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
121.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
110.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
103.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
89.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
87.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
86.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
82.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
79.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
76.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
74.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
73.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
68.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
67.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
64.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
63.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
61.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
61.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
59.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
58.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
58.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
56.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
56.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
53.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
53.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
51.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
51.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
50.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
49.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
48.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
47.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
46.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
46.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
44.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
44.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
43.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
43.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
42.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
42.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
40.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
40.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
39.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
38.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
38.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
37.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
37.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
37.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
36.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
35.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
35.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
35.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
34.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
33.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
33.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
32.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
32.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
31.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
31.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
31.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
30.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
30.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
30.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
30.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
29.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
28.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
28.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
27.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
27.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
27.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
27.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
26.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
26.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
26.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
26.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
25.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
25.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
25.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
25.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
25.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
25.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
25.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
24.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
24.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
24.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
24.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
24.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
23.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
23.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
22.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
22.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
22.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
22.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
22.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
22.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
21.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
21.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
21.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
21.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
21.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
21.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
21.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
21.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
21.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
20.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
20.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
20.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
20.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
19.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
19.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
19.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
19.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
18.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
18.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
17.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
17.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
17.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
17.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
17.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
17.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
17.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
16.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
16.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
16.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
16.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
16.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
16.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
16.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
16.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
16.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
15.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
15.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
15.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
15.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
15.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
14.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
14.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
14.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
14.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
14.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
14.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
14.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
14.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
14.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
13.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
13.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
13.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
13.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
13.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
13.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
13.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
12.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
12.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
12.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
12.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
12.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
11.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
11.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
11.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
11.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
11.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
11.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
11.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
11.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
11.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
10.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
10.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
10.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
10.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
10.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
10.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
10.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
10.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
10.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
10.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
10.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
9.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
9.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
9.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
9.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
9.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
9.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
9.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
9.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
9.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
9.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
8.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
8.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
8.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
8.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
8.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
8.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
8.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
7.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
7.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
7.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
7.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
7.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
7.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
7.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
7.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
6.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
6.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
5.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
5.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
5.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
5.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
5.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
5.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
5.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
4.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
4.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
4.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
4.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
3.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
3.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
2.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
2.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
2.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
2.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
2.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
1.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
1.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
0.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
0.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
0.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
0.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
0.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
0.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
0.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
0.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
0.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
0.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
0.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
0.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
0.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
0.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
0.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
0.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001350001
Normal
1.2
CPT0076350001
Normal
1.1
CPT0089480003
Normal
1.1
CPT0092800003
Normal
0.9
CPT0006950001
Normal
0.9
CPT0065450001
Normal
0.9
CPT0006730001
Normal
0.9
CPT0088710001
Normal
0.9
CPT0001190001
Normal
0.9
CPT0088920001
Normal
0.9
CPT0023360001
Normal
0.9
CPT0026420001
Normal
0.9
CPT0025060001
Normal
0.9
CPT0092740003
Normal
0.9
CPT0066430001
Normal
0.8
CPT0086970003
Normal
0.8
CPT0014130001
Normal
0.8
CPT0092310003
Normal
0.8
CPT0014350001
Normal
0.8
CPT0079430001
Normal
0.8
CPT0000790001
Normal
0.8
CPT0078840001
Normal
0.7
CPT0077140001
Normal
0.7
CPT0078830003
Tumor
0.7
CPT0077500001
Normal
0.7
CPT0012090003
Normal
0.7
CPT0007470001
Normal
0.7
CPT0012290003
Normal
0.7
CPT0010170001
Normal
0.7
CPT0063640001
Normal
0.7
CPT0023710001
Normal
0.7
CPT0000890001
Normal
0.7
CPT0089040001
Normal
0.7
CPT0087050003
Normal
0.7
CPT0013790003
Normal
0.6
CPT0066520001
Normal
0.6
CPT0082010001
Normal
0.6
CPT0012770003
Normal
0.6
CPT0081620001
Normal
0.6
CPT0017450001
Normal
0.5
CPT0020130001
Normal
0.5
CPT0006530001
Normal
0.5
CPT0088780001
Normal
0.5
CPT0012570003
Normal
0.5
CPT0018250001
Normal
0.5
CPT0088570001
Normal
0.5
CPT0002350011
Tumor
0.4
CPT0086370003
Normal
0.4
CPT0075570001
Normal
0.4
CPT0088500001
Normal
0.4
CPT0086890003
Normal
0.3
CPT0001270001
Normal
0.3
CPT0000660001
Normal
0.3
CPT0020020001
Normal
0.3
CPT0069010001
Normal
0.3
CPT0086830003
Normal
0.3
CPT0065820001
Normal
0.3
CPT0079000001
Normal
0.3
CPT0025610001
Normal
0.3
CPT0078670001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0078940001
Normal
0.2
CPT0075170001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0079410003
Tumor
0.2
CPT0001510001
Normal
0.2
CPT0078530001
Normal
0.1
CPT0002270011
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0001180009
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0069190001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0012370003
Tumor
-0.2
CPT0086820003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0088480003
Tumor
-0.2
CPT0007320003
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0084590001
Normal
-0.3
CPT0001220008
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0086870003
Tumor
-0.4
CPT0010160003
Tumor
-0.4
CPT0089460004
Tumor
-0.4
CPT0001540009
Tumor
-0.4
CPT0079270003
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0077320001
Normal
-0.4
CPT0065810003
Tumor
-0.4
CPT0012900004
Tumor
-0.5
CPT0025170003
Tumor
-0.5
CPT0009020003
Normal
-0.5
CPT0006440003
Tumor
-0.5
CPT0002370001
Normal
-0.5
CPT0014450004
Tumor
-0.5
CPT0086360003
Tumor
-0.5
CPT0023350003
Tumor
-0.5
CPT0000870016
Tumor
-0.5
CPT0065430003
Tumor
-0.5
CPT0026410003
Tumor
-0.5
CPT0065870003
Tumor
-0.5
CPT0001500009
Tumor
-0.6
CPT0007860003
Tumor
-0.6
CPT0079230003
Tumor
-0.6
CPT0015810003
Tumor
-0.6
CPT0066470004
Tumor
-0.7
CPT0064370003
Tumor
-0.7
CPT0075720003
Tumor
-0.7
CPT0065930003
Tumor
-0.7
CPT0025880003
Tumor
-0.7
CPT0063320003
Tumor
-0.7
CPT0014160003
Tumor
-0.7
CPT0078930003
Tumor
-0.7
CPT0025050003
Tumor
-0.8
CPT0019990003
Tumor
-0.8
CPT0087040003
Tumor
-0.8
CPT0012640003
Normal
-0.8
CPT0006630003
Tumor
-0.8
CPT0077490003
Tumor
-0.8
CPT0023690003
Tumor
-0.8
CPT0025580004
Tumor
-0.8
CPT0069000003
Tumor
-0.8
CPT0075560003
Tumor
-0.8
CPT0019130003
Tumor
-0.9
CPT0092190003
Normal
-0.9
CPT0025230003
Tumor
-0.9
CPT0081990003
Tumor
-0.9
CPT0092790003
Tumor
-0.9
CPT0088970003
Tumor
-0.9
CPT0015910003
Tumor
-0.9
CPT0015730003
Tumor
-0.9
CPT0092290003
Tumor
-0.9
CPT0012670003
Tumor
-1.0
CPT0078510003
Tumor
-1.0
CPT0009060003
Tumor
-1.0
CPT0085670003
Tumor
-1.0
CPT0006900003
Tumor
-1.0
CPT0081600003
Tumor
-1.1
CPT0088760003
Tumor
-1.1
CPT0025290003
Tumor
-1.1
CPT0012550003
Tumor
-1.1
CPT0079300001
Normal
-1.1
CPT0010110003
Tumor
-1.1
CPT0020120003
Tumor
-1.1
CPT0075130003
Tumor
-1.1
CPT0009000003
Tumor
-1.1
CPT0066480003
Tumor
-1.1
CPT0065750003
Tumor
-1.2
CPT0088630003
Tumor
-1.2
CPT0001260009
Tumor
-1.2
CPT0071150004
Tumor
-1.3
CPT0089020003
Tumor
-1.3
CPT0011240003
Tumor
-1.3
CPT0000780007
Tumor
-1.3
CPT0092730003
Tumor
-1.3
CPT0078990003
Tumor
-1.3
CPT0079510001
Normal
-1.3
CPT0088900003
Tumor
-1.4
CPT0086030003
Tumor
-1.4
CPT0076330003
Tumor
-1.4
CPT0012280003
Tumor
-1.5
CPT0088690003
Tumor
-1.6
CPT0000640003
Tumor
-1.8
CPT0079380003
Tumor
-1.8
CPT0065690003
Tumor
-1.8
CPT0063630003
Tumor
-1.8
CPT0069160003
Tumor
-1.9
CPT0012080003
Tumor
-1.9
CPT0017410003
Tumor
-2.0
CPT0084560003
Tumor
-2.1
CPT0079180003
Tumor
-2.1
CPT0021240003
Tumor
-2.1
CPT0017850003
Tumor
-2.2
CPT0011410003
Tumor
-2.3
CPT0012180003
Tumor
-2.4
CPT0088550004
Tumor
-2.5
CPT0078660003
Tumor
-2.5
CPT0001340003
Tumor
-2.5
CPT0081880003
Tumor
-2.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
