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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCNP is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
81.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
68.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
62.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
61.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
60.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
55.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
51.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
51.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
50.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
49.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
47.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
46.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
45.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
44.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
40.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
39.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
38.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
38.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
37.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
36.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
36.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
35.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
34.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
34.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
33.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
32.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
32.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
30.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
30.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
30.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
29.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
28.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
28.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
27.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
27.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
25.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
25.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
24.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
24.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
23.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
23.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
23.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
23.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
22.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
21.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
21.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
21.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
21.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
20.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
19.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
15.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
14.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
14.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
13.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
12.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
12.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
10.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
7.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
3.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
1.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCNP is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
249.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
196.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
83.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
81.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
79.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
79.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
77.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
77.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
77.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
74.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
72.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
71.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
70.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
70.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
70.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
69.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
69.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
68.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
68.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
66.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
65.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
65.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
64.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
63.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
63.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
62.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
62.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
61.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
61.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
59.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
59.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
58.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
58.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
58.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
58.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
57.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
57.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
57.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
57.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
57.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
57.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
57.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
57.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
57.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
57.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
56.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
56.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
56.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
56.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
55.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
55.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
54.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
54.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
54.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
54.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
54.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
54.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
54.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
54.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
54.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
53.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
53.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
53.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
53.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
53.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
53.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
53.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
53.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
53.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
53.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
52.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
52.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
52.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
52.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
52.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
52.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
52.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
51.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
51.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
51.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
51.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
51.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
51.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
51.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
51.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
51.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
50.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
50.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
50.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
50.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
50.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
50.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
50.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
50.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
50.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
50.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
50.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
50.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
50.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
50.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
50.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
50.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
49.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
49.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
49.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
49.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
49.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
49.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
49.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
49.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
49.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
49.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
48.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
48.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
48.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
48.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
48.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
48.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
48.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
48.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
48.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
48.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
48.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
48.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
48.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
48.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
47.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
47.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
47.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
47.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
47.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
47.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
47.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
47.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
47.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
47.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
47.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
47.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
47.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
47.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
47.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
47.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
47.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
47.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
46.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
46.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
46.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
46.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
46.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
46.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
46.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
46.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
46.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
46.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
46.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
46.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
46.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
46.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
46.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
46.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
46.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
46.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
46.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
46.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
45.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
45.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
45.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
45.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
45.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
45.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
45.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
45.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
45.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
45.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
45.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
45.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
45.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
45.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
44.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
44.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
44.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
44.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
44.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
44.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
44.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
44.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
44.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
44.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
44.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
44.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
44.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
44.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
44.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
43.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
43.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
43.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
43.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
43.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
43.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
43.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
43.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
43.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
43.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
43.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
42.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
42.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
42.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
42.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
42.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
42.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
42.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
42.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
42.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
42.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
42.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
42.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
42.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
42.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
41.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
41.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
41.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
41.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
41.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
41.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
41.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
41.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
41.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
41.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
41.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
41.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
41.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
41.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
41.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
41.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
40.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
40.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
40.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
40.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
40.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
40.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
40.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
40.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
39.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
39.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
39.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
39.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
39.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
39.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
39.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
39.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
39.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
38.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
38.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
38.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
38.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
38.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
38.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
38.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
38.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
38.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
38.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
38.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
38.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
38.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
38.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
38.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
38.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
38.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
37.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
37.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
37.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
37.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
37.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
37.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
37.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
37.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
37.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
37.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
37.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
37.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
37.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
37.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
37.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
37.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
36.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
36.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
36.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
36.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
36.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
36.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
36.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
36.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
36.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
36.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
36.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
35.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
35.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
35.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
35.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
35.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
35.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
35.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
35.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
35.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
35.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
35.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
35.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
34.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
34.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
34.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
34.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
34.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
34.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
34.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
34.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
34.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
34.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
34.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
34.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
34.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
33.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
33.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
33.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
33.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
33.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
33.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
33.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
33.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
33.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
33.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
33.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
33.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
33.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
33.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
33.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
33.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
33.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
33.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
32.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
32.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
32.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
32.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
32.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
32.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
32.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
31.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
31.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
31.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
31.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
31.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
31.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
31.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
31.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
31.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
31.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
31.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
31.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
31.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
31.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
31.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
31.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
30.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
30.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
30.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
30.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
30.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
30.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
30.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
30.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
30.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
30.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
30.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
30.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
30.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
30.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
30.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
29.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
29.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
29.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
29.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
29.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
29.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
29.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
29.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
29.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
29.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
29.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
29.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
29.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
29.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
29.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
28.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
28.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
28.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
28.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
28.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
28.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
28.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
28.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
28.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
28.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
28.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
28.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
28.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
28.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
28.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
28.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
28.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
28.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
28.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
28.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
28.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
27.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
27.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
27.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
27.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
27.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
27.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
27.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
27.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
27.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
27.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
27.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
27.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
27.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
27.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
27.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
27.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
27.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
26.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
26.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
26.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
26.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
26.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
26.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
26.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
26.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
26.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
26.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
26.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
26.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
26.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
25.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
25.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
25.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
25.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
25.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
25.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
25.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
25.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
25.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
25.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
25.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
25.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
25.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
25.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
25.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
25.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
24.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
24.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
24.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
24.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
24.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
24.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
24.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
24.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
24.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
24.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
23.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
23.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
23.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
23.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
23.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
23.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
23.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
23.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
23.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
23.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
22.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
22.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
22.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
22.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
22.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
21.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
21.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
21.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
21.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
21.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
21.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
20.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
20.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
20.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
19.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
19.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
19.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
19.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
19.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
19.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
19.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
19.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
18.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
18.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
18.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
18.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
17.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
17.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
16.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
16.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
16.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
16.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
16.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
15.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
15.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
15.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
13.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
12.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
12.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCNP is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
91.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
89.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
86.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
83.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
81.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
79.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
77.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
77.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
77.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
75.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
73.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
73.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
73.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
73.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
71.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
70.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
70.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
69.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
66.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
66.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
66.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
64.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
64.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
64.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
64.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
63.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
63.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
62.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
61.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
61.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
61.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
61.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
60.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
59.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
59.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
58.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
56.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
56.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
56.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
56.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
56.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
55.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
54.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
52.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
52.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
52.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
51.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
51.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
51.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
51.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
50.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
50.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
49.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
49.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
49.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
49.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
48.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
48.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
48.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
47.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
46.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
46.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
46.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
45.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
45.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
45.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
45.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
44.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
44.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
44.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
43.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
43.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
42.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
42.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
41.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
40.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
40.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
39.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
39.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
38.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
38.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
38.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
38.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
37.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
36.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
35.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
35.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
34.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
34.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
33.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
32.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
31.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
31.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
30.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
28.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
27.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
25.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
24.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
23.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCNP is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
266.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
190.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
125.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
89.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
87.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
78.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
76.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
71.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
70.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
64.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
64.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
63.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
63.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
63.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
60.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
58.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
58.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
57.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
56.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
56.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
55.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
55.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
55.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
53.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
52.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
52.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
52.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
51.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
51.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
51.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
51.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
50.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
50.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
50.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
50.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
50.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
49.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
49.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
49.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
49.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
49.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
48.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
48.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
48.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
48.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
48.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
47.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
46.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
46.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
46.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
46.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
46.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
46.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
46.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
46.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
46.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
46.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
45.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
45.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
45.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
45.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
44.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
44.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
44.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
43.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
43.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
43.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
43.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
43.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
42.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
42.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
42.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
42.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
42.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
42.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
41.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
41.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
41.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
41.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
41.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
41.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
41.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
40.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
40.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
40.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
39.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
39.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
39.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
39.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
39.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
39.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
38.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
38.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
38.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
38.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
38.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
37.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
37.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
37.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
36.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
36.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
36.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
36.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
36.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
36.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
36.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
36.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
36.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
36.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
36.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
36.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
35.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
35.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
35.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
35.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
35.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
34.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
34.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
34.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
34.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
34.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
34.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
34.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
34.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
34.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
34.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
34.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
34.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
33.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
33.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
33.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
33.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
33.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
33.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
32.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
32.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
32.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
32.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
32.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
31.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
31.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
31.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
31.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
31.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
31.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
31.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
31.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
31.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
31.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
31.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
30.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
30.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
30.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
30.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
30.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
30.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
30.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
30.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
30.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
30.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
30.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
30.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
29.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
29.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
29.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
29.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
29.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
28.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
28.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
28.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
28.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
28.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
27.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
27.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
27.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
27.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
27.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
27.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
27.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
27.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
27.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
27.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
27.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
27.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
26.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
26.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
26.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
26.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
26.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
26.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
25.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
25.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
25.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
25.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
25.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
25.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
25.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
25.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
24.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
24.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
24.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
24.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
24.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
23.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
23.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
23.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
23.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
23.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
23.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
23.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
22.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
22.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
22.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
22.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
22.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
22.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
21.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
21.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
21.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
21.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
21.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
21.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
21.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
21.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
20.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
20.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
20.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
20.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
19.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
19.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
19.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
19.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
19.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
19.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
18.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
18.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
17.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
17.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
17.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
16.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
16.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
16.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
16.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
15.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
15.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
15.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
15.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
14.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
14.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
13.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
12.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
12.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
11.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
9.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
9.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
9.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
8.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
5.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
4.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
3.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0006440003
Tumor
0.8
CPT0079180003
Tumor
0.7
CPT0000640003
Tumor
0.7
CPT0010160003
Tumor
0.6
CPT0077110003
Tumor
0.6
CPT0014370004
Tumor
0.6
CPT0071150004
Tumor
0.6
CPT0086870003
Tumor
0.5
CPT0085670003
Tumor
0.5
CPT0088550004
Tumor
0.5
CPT0001540009
Tumor
0.5
CPT0000780007
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0011240003
Tumor
0.4
CPT0025580004
Tumor
0.4
CPT0079510001
Normal
0.4
CPT0077490003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0006630003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0092730003
Tumor
0.4
CPT0075720003
Tumor
0.4
CPT0088760003
Tumor
0.4
CPT0081990003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0079300001
Normal
0.3
CPT0079380003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0077310003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0084590001
Normal
0.3
CPT0006900003
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0001230001
Normal
0.2
CPT0015810003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0001220008
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0078660003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0014470001
Normal
0.2
CPT0007860003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0063320003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0024670003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0001340003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0086890003
Normal
0.1
CPT0078530001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0075570001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0079230003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0025880003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0012550003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0023710001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0026410003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0009060003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0020130001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0076330003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0019160001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0002370001
Normal
0.0
CPT0092740003
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0012090003
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0019130003
Tumor
-0.2
CPT0092310003
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0092290003
Tumor
-0.2
CPT0010170001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0065750003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0077500001
Normal
-0.3
CPT0021240003
Tumor
-0.3
CPT0009080003
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0012770003
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0026420001
Normal
-0.4
CPT0081880003
Tumor
-0.4
CPT0086950003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.