HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:46.6 nTPM
HPA Brain:108.6 nTPM
GTEx:46.6 nTPM
FANTOM5:247.2 Scaled Tags Per Million
Pig:20.7 nTPM
Mouse:14.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA025813Antibody CAB004468
Glial cells Not detectedHigh
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 108.6
Sample id Sample description nTPM
Hippocampus
nTPM: 85.9
1898 Male, age 80, left hemisphere 106.5
1855 Male, age 76, left hemisphere 87.5
2621 Female, age 67, right hemisphere 83.8
1911 Female, age 85, right hemisphere 83.0
2529 Female, age 94, left hemisphere 77.7
2148 Female, age 91, left hemisphere 77.1
Dentate gyrus
nTPM: 86.1
1927 Female, age 91, both hemispheres 100.9
2010 Male, age 76, both hemispheres 91.8
2528 Male, age 74, both hemispheres 87.2
2246 Female, age 85, both hemispheres 85.5
2530 Female, age 94, left hemisphere 76.0
2531 Female, age 67, both hemispheres 75.5
Entorhinal gyrus
nTPM: 86.4
1938 Female, age 85, left hemisphere 103.1
2764 Male, age 80, right hemisphere 92.8
1787 Male, age 76, left hemisphere 89.2
2117 Female, age 91, right hemisphere 86.8
2613 Female, age 94, left hemisphere 75.9
2686 Male, age 75, right hemisphere 70.5
Hippocampus, CA1
nTPM: 94.7
2749 Male, age 80, left hemisphere 114.1
1873 Female, age 85, both hemispheres 99.7
2045 Male, age 76, both hemispheres 95.6
2527 Male, age 74, both hemispheres 90.1
2082 Female, age 91, right hemisphere 74.1
Hippocampus, CA2
nTPM: 86.4
1892 Male, age 76, both hemispheres 104.4
1963 Male, age 80, left hemisphere 91.6
2249 Male, age 74, both hemispheres 88.2
1940 Female, age 85, left hemisphere 82.2
2113 Female, age 91, right hemisphere 76.4
2437 Female, age 94, left hemisphere 75.8
Hippocampus, CA3
nTPM: 88.4
2137 Male, age 80, left hemisphere 103.7
1867 Male, age 76, both hemispheres 99.4
1891 Female, age 85, both hemispheres 91.6
2436 Male, age 74, both hemispheres 86.8
2620 Female, age 94, left hemisphere 81.7
2861 Female, age 67, both hemispheres 67.5
Parahippocampal cortex
nTPM: 88.7
1850 Male, age 80, both hemispheres 116.8
1933 Female, age 85, both hemispheres 98.4
2250 Female, age 67, right hemisphere 91.9
1990 Female, age 91, right hemisphere 90.8
2018 Male, age 76, both hemispheres 89.6
2532 Female, age 72, left hemisphere 89.5
2245 Female, age 91, both hemispheres 86.4
2693 Female, age 94, both hemispheres 84.7
2692 Male, age 74, both hemispheres 74.9
2622 Female, age 67, right hemisphere 64.4
Perirhinal gyrus
nTPM: 108.6
1794 Male, age 80, right hemisphere 118.3
1847 Female, age 91, left hemisphere 116.9
1841 Female, age 85, right hemisphere 114.3
2848 Male, age 76, right hemisphere 98.7
2521 Female, age 94, right hemisphere 95.0
Subiculum
nTPM: 86.6
1977 Female, age 85, both hemispheres 98.8
1901 Male, age 80, both hemispheres 95.8
2042 Male, age 76, both hemispheres 88.8
2619 Male, age 74, both hemispheres 80.3
2729 Female, age 91, right hemisphere 80.3
2438 Female, age 94, left hemisphere 75.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 46.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.6
Samples: 197

Max nTPM: 66.2
Min nTPM: 27.7
Std nTPM: 6.7
Median nTPM: 46.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 66.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 64.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 61.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 61.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 61.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 60.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 60.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 59.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 59.1
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 58.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 57.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 247.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 247.2
FF:10169-103B7 60 years, female 315.7
FF:10153-102I9 76 years, female 178.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 20.7
Pig sample Sample description nTPM
Subiculum
nTPM: 19.8
Samples: 4

Max nTPM: 22.0
Min nTPM: 17.6
Sample A Female 22.0
Sample B Female 20.7
Sample C Male 18.8
Sample D Male 17.6
Dorsal hippocampus
nTPM: 20.7
Samples: 4

Max nTPM: 23.2
Min nTPM: 18.3
Sample A Female 23.2
Sample B Female 20.9
Sample C Male 20.3
Sample D Male 18.3
Entorhinal cortex
nTPM: 19.0
Samples: 4

Max nTPM: 22.1
Min nTPM: 14.9
Sample A Female 18.1
Sample B Female 20.8
Sample C Male 22.1
Sample D Male 14.9
Ventral hippocampus
nTPM: 19.5
Samples: 4

Max nTPM: 20.5
Min nTPM: 18.4
Sample A Female 20.3
Sample B Female 18.7
Sample C Male 20.5
Sample D Male 18.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 14.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 14.7
Min nTPM: 14.0
Sample A Male 14.6
Sample B Male 14.0
Sample C Female 14.3
Sample D Female 14.7
Hippocampal formation
nTPM: 12.6
Samples: 4

Max nTPM: 13.8
Min nTPM: 11.7
Sample A Male 13.8
Sample B Male 11.7
Sample C Female 11.7
Sample D Female 13.0

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