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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
80.6
nTPM
HPA Brain:
132.0
nTPM
GTEx:
80.6
nTPM
FANTOM5:
134.5
Scaled Tags Per Million
Pig:
122.9
nTPM
Mouse:
85.9
nTPM
Allen mouse:
4.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
132.0
Sample id
Sample description
nTPM
Amygdala nTPM: 95.3
2517
Female, age 94, left hemisphere
105.2
1987
Female, age 91, left hemisphere
99.2
2514
Male, age 75, right hemisphere
95.8
2814
Male, age 76, right hemisphere
95.7
2695
Female, age 67, right hemisphere
80.4
Basal amygdala nTPM: 130.8
2110
Male, age 80, left hemisphere
150.9
2243
Female, age 91, right hemisphere
146.6
2685
Female, age 94, left hemisphere
131.6
2827
Female, age 67, right hemisphere
128.4
2609
Male, age 75, right hemisphere
114.6
1955
Male, age 76, both hemispheres
112.7
Central amygdala nTPM: 117.4
2826
Female, age 94, left hemisphere
174.3
2239
Male, age 80, left hemisphere
134.2
2515
Male, age 75, right hemisphere
114.2
1905
Male, age 76, both hemispheres
88.3
2701
Female, age 91, right hemisphere
76.0
Corticomedial amygdala nTPM: 120.4
2829
Male, age 80, left hemisphere
154.4
2242
Female, age 91, right hemisphere
125.6
2535
Female, age 67, right hemisphere
124.4
2428
Male, age 75, right hemisphere
114.7
2429
Female, age 94, left hemisphere
109.8
2240
Male, age 76, both hemispheres
93.3
Lateral amygdala nTPM: 132.0
2534
Female, age 94, left hemisphere
222.5
2256
Male, age 80, left hemisphere
135.0
1883
Male, age 76, both hemispheres
121.0
2830
Female, age 67, right hemisphere
110.3
2516
Male, age 75, right hemisphere
103.0
2255
Female, age 91, right hemisphere
99.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
80.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 80.6
Samples: 152
Max nTPM: 239.2
Min nTPM: 25.5
Std nTPM: 36.9
Median nTPM: 71.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
239.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
230.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
220.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
188.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
156.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
146.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
144.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
141.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
139.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
139.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
135.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
135.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
135.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
131.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
129.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
128.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
125.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
121.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
120.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
120.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
119.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
118.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
115.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
114.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
114.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
113.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
112.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
111.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
111.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
110.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
110.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
107.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
104.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
102.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
101.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
100.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
100.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
98.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
98.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
97.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
95.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
94.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
94.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
91.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
91.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
91.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
90.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
89.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
88.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
88.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
87.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
87.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
86.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
85.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
85.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
85.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
84.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
83.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
83.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
83.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
81.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
81.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
80.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
80.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
78.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
77.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
76.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
76.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
75.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
75.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
74.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
74.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
74.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
74.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
72.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
71.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
71.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
71.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
71.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
69.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
68.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
67.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
67.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
67.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
67.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
66.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
65.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
65.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
64.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
63.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
62.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
61.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
61.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
61.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
60.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
60.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
60.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
60.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
60.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
59.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
59.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
59.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
58.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
58.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
56.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
56.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
54.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
54.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
54.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
54.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
53.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
53.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
53.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
53.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
53.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
53.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
53.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
53.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
52.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
52.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
52.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
51.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
51.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
50.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
50.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
50.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
49.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
49.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
49.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
49.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
48.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
48.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
47.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
47.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
46.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
46.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
46.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
45.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
44.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
44.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
43.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
42.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
42.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
39.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
39.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
39.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
36.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
36.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
34.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
33.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
32.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
25.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
85.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 85.9
Samples: 4
Max nTPM: 90.6
Min nTPM: 80.5
Sample A
Male
86.1
Sample B
Male
80.5
Sample C
Female
90.6
Sample D
Female
86.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.