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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
2244.3
nTPM
GTEx:
2244.3
nTPM
FANTOM5:
451.0
Scaled Tags Per Million
Pig:
826.0
nTPM
Mouse:
6294.1
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2244.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 2244.3
Samples: 105
Max nTPM: 4017.9
Min nTPM: 687.4
Std nTPM: 755.0
Median nTPM:
172_1
72 years, female
4017.9
229_1
69 years, female
3721.5
386_1
76 years, male
3669.0
405_1
91 years, male
3640.8
352_1
62 years, male
3531.3
316_1
62 years, male
3517.7
425_1
59 years, female
3395.0
6_1
73 years, female
3385.4
237_1
82 years, male
3364.7
319_1
81 years, male
3235.3
480_1
63 years, male
3109.7
9_1
66 years, female
3099.8
447_1
81 years, male
3067.5
286_1
68 years, female
3024.5
354_1
81 years, female
2988.6
324_1
76 years, male
2972.0
251_1
78 years, male
2967.4
177_1
74 years, male
2957.8
126_1
63 years, male
2952.9
153_1
70 years, female
2937.3
189_1
76 years, male
2933.2
246_1
77 years, male
2861.3
355_1
70 years, female
2859.0
335_1
73 years, female
2849.0
35_1
74 years, female
2825.7
322_1
76 years, male
2807.2
115_1
83 years, male
2747.5
404_1
82 years, female
2708.8
406_1
79 years, male
2684.4
518_1
75 years, female
2683.9
375_1
74 years, female
2680.3
320_1
89 years, female
2670.2
243_1
75 years, male
2666.0
81_1
67 years, male
2646.6
526_1
61 years, male
2623.0
321_1
62 years, female
2613.2
163_1
78 years, male
2606.8
217_1
76 years, male
2604.0
376_1
75 years, female
2573.1
389_1
86 years, female
2547.8
318_1
68 years, male
2541.9
396_1
62 years, male
2524.1
377_1
82 years, female
2520.2
292_1
71 years, male
2499.0
347_1
72 years, male
2455.5
353_1
82 years, female
2455.5
348_1
84 years, male
2441.8
218_1
71 years, female
2429.8
468_1
89 years, male
2417.8
503_1
68 years, male
2403.3
266_1
85 years, male
2373.3
350_1
84 years, female
2359.1
356_1
87 years, female
2309.3
99_1
64 years, male
2273.3
162_1
79 years, female
2249.1
117_1
61 years, male
2245.4
43_1
64 years, female
2239.3
349_1
83 years, male
2236.0
293_1
68 years, female
2218.8
499_1
55 years, female
2217.8
32_1
67 years, male
2170.0
415_1
77 years, female
2168.2
137_1
83 years, male
2126.2
291_1
76 years, male
2104.9
394_1
75 years, female
2068.1
517_1
88 years, male
2048.9
18_1
88 years, male
2021.3
379_1
60 years, male
2010.9
264_1
73 years, female
2010.8
142_1
61 years, female
1991.3
145_1
84 years, male
1959.3
265_1
87 years, male
1948.9
466_1
57 years, female
1880.5
254_1
77 years, female
1763.2
311_1
78 years, male
1726.9
384_1
83 years, male
1713.7
506_1
65 years, male
1688.4
351_1
91 years, male
1651.3
288_1
66 years, female
1637.2
414_1
84 years, female
1588.3
313_1
79 years, female
1555.5
17_1
71 years, male
1537.7
495_1
57 years, female
1515.9
120_1
70 years, female
1491.4
149_1
88 years, male
1458.9
173_1
67 years, male
1456.7
315_1
62 years, female
1454.6
2_1
77 years, female
1386.0
109_1
81 years, female
1322.0
317_1
60 years, male
1314.7
490_1
67 years, female
1305.3
139_1
64 years, female
1291.6
452_1
88 years, female
1262.2
307_1
66 years, female
1253.5
4_1
88 years, female
1247.9
42_1
85 years, male
1190.3
314_1
67 years, male
1138.5
119_1
70 years, female
1126.2
413_1
59 years, female
1047.8
295_1
61 years, female
1044.4
501_1
88 years, male
836.4
89_1
63 years, male
818.2
41_1
94 years, female
780.9
491_1
89 years, female
697.0
308_1
70 years, female
687.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.