We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
180.4
nTPM
HPA Brain:
355.6
nTPM
GTEx:
180.4
nTPM
FANTOM5:
229.1
Scaled Tags Per Million
Pig:
195.7
nTPM
Mouse:
318.9
nTPM
Allen mouse:
6.7
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
355.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 313.4
2666
Male, age 74, left hemisphere
369.0
1827
Male, age 72, unknown
365.3
2586
Male, age 75, left hemisphere
354.8
2219
Male, age 76, both hemispheres
308.1
2411
Female, age 72, unknown
305.0
2828
Female, age 72, unknown
301.9
1870
Female, age 42, unknown
298.4
1833
Male, age 53, unknown
285.0
2019
Male, age 18, unknown
282.0
1830
Male, age 51, unknown
264.4
Dorsal raphe nucleus nTPM: 299.0
2298
Female, age 72, unknown
326.5
2047
Male, age 72, unknown
317.0
2750
Male, age 76, both hemispheres
302.4
1828
Male, age 53, unknown
299.5
2016
Female, age 72, unknown
249.6
Inferior colliculus nTPM: 313.3
2097
Female, age 72, unknown
332.2
1848
Female, age 42, unknown
320.8
2849
Male, age 72, unknown
310.5
1890
Male, age 53, unknown
289.7
Median raphe nucleus nTPM: 346.4
2220
Male, age 76, midline
346.4
Periaquaductal grey, anterior nTPM: 355.6
1947
Male, age 18, unknown
375.7
1795
Male, age 51, unknown
372.4
2502
Female, age 75, unknown
318.7
Periaquaductal grey, dorsal nTPM: 277.6
1831
Male, age 72, unknown
301.5
1840
Male, age 53, unknown
289.6
2850
Male, age 76, both hemispheres
279.1
2464
Female, age 72, unknown
240.0
Periaquaductal grey, lateral nTPM: 257.8
2053
Male, age 18, unknown
274.7
2272
Male, age 74, both hemispheres
265.6
2140
Male, age 76, both hemispheres
232.9
Pretectal area nTPM: 325.0
1944
Female, age 72, unknown
428.5
1816
Male, age 51, unknown
412.5
1817
Female, age 42, unknown
388.6
2007
Male, age 72, unknown
376.9
1815
Male, age 53, unknown
353.6
2667
Female, age 75, unknown
315.1
2825
Male, age 18, unknown
291.4
2224
Female, age 72, unknown
271.1
2273
Male, age 74, both hemispheres
257.5
2407
Male, age 75, both hemispheres
240.5
2316
Male, age 76, right hemisphere
239.7
Red nucleus nTPM: 264.9
1821
Female, age 72, unknown
308.6
2725
Female, age 75, unknown
288.2
2584
Male, age 75, left hemisphere
279.9
2785
Male, age 18, unknown
279.3
2588
Male, age 74, left hemisphere
265.5
1904
Male, age 53, unknown
264.3
1954
Female, age 42, unknown
264.2
1865
Male, age 51, unknown
260.4
2769
Male, age 72, unknown
248.9
2227
Male, age 72, unknown
247.8
2503
Female, age 72, unknown
238.4
2823
Male, age 76, right hemisphere
233.4
Substantia nigra nTPM: 344.4
1916
Female, age 42, unknown
423.6
1889
Female, age 72, unknown
392.0
2665
Male, age 74, both hemispheres
387.1
1851
Male, age 51, unknown
352.5
1941
Male, age 53, unknown
350.5
2409
Female, age 72, unknown
336.6
2699
Male, age 18, unknown
312.0
2583
Male, age 75, right hemisphere
301.7
2241
Male, age 72, unknown
297.9
2590
Female, age 75, unknown
290.4
Superior colliculus nTPM: 317.8
2668
Female, age 75, unknown
382.3
1796
Male, age 53, unknown
372.9
2261
Male, age 18, unknown
348.1
2087
Female, age 72, unknown
333.0
1895
Male, age 76, right hemisphere
314.9
2587
Male, age 74, left hemisphere
304.6
1913
Female, age 42, unknown
304.2
1839
Male, age 51, unknown
282.9
2664
Male, age 75, both hemispheres
279.2
1995
Male, age 72, unknown
255.9
Ventral tegmental area nTPM: 338.8
2218
Male, age 76, both hemispheres
382.4
2410
Female, age 72, unknown
367.2
2223
Female, age 72, unknown
344.0
1915
Female, age 42, unknown
338.8
1942
Male, age 51, unknown
320.0
2021
Male, age 53, unknown
280.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
180.4
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 180.4
Samples: 139
Max nTPM: 332.7
Min nTPM: 121.5
Std nTPM: 37.5
Median nTPM: 168.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
332.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
306.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
275.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
270.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
263.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
261.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
261.1
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
252.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
252.7
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
252.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
250.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
249.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
245.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
244.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
239.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
233.8
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
229.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
221.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
221.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
220.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
218.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
216.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
212.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
212.1
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
210.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
207.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
206.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
203.4
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
202.2
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
201.2
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
200.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
200.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
199.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
199.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
197.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
195.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
194.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
193.9
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
192.4
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
191.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
191.3
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
190.5
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
190.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
189.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
188.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
186.2
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
185.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
185.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
184.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
183.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
183.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
183.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
182.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
181.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
180.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
177.9
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
177.4
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
177.2
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
176.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
176.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
176.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
174.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
174.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
172.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
172.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
171.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
169.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
168.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
168.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
168.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
168.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
166.9
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
166.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
166.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
165.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
165.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
165.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
164.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
164.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
163.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
163.1
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
162.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
162.7
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
162.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
161.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
161.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
161.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
160.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
160.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
160.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
159.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
159.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
159.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
158.5
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
158.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
158.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
157.6
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
156.9
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
156.1
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
155.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
155.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
155.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
155.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
155.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
153.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
153.7
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
153.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
152.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
152.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
151.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
151.0
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
150.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
149.2
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
149.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
148.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
148.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
148.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
147.9
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
147.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
147.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
146.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
145.8
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
145.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
144.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
144.6
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
144.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
144.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
144.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
144.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
143.8
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
143.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
143.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
139.6
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
139.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
138.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
134.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
132.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
123.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
121.5
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
318.9
Mouse sample
Sample description
nTPM
Midbrain nTPM: 318.9
Samples: 4
Max nTPM: 328.6
Min nTPM: 312.9
Sample A
Male
312.9
Sample B
Male
313.2
Sample C
Female
328.6
Sample D
Female
320.8
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.