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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
384.9
nTPM
FANTOM5:
367.6
Scaled Tags Per Million
Pig:
206.9
nTPM
Allen mouse:
6.6
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
384.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 282.0
1984
Male, age 76, both hemispheres
301.1
2090
Male, age 80, both hemispheres
280.9
2188
Female, age 91, both hemispheres
277.2
2301
Female, age 85, both hemispheres
268.6
Dorsal cochlear nucleus nTPM: 307.2
2802
Male, age 74, right hemisphere
326.7
2187
Female, age 91, both hemispheres
325.6
2370
Male, age 61, both hemispheres
312.0
2058
Male, age 76, both hemispheres
298.8
2378
Male, age 80, both hemispheres
272.7
Dorsal tegmental nucleus nTPM: 298.4
2358
Male, age 61, both hemispheres
340.5
2083
Male, age 80, both hemispheres
319.9
2326
Male, age 74, both hemispheres
268.4
1936
Male, age 76, left hemisphere
264.6
Dorsolateral tegmental area nTPM: 294.7
2654
Male, age 80, both hemispheres
346.6
2751
Female, age 85, both hemispheres
312.8
2141
Male, age 76, both hemispheres
304.5
2360
Male, age 74, both hemispheres
256.7
2337
Male, age 61, both hemispheres
252.9
Kolliker-Fuse nucleus nTPM: 296.9
2793
Female, age 91, left hemisphere
327.3
2163
Male, age 80, both hemispheres
325.4
2315
Male, age 76, right hemisphere
238.0
Lateral lemniscal nuclei nTPM: 323.4
2169
Male, age 76, both hemispheres
388.3
2746
Female, age 85, left hemisphere
339.6
2453
Male, age 74, right hemisphere
314.0
2036
Male, age 80, both hemispheres
311.2
2320
Female, age 91, left hemisphere
263.7
Lateral parabrachial nucleus nTPM: 300.0
2139
Female, age 85, right hemisphere
362.1
2013
Male, age 80, both hemispheres
320.2
2790
Male, age 61, both hemispheres
273.8
2792
Male, age 76, both hemispheres
244.0
Lateral vestibular nucleus nTPM: 287.6
2311
Male, age 80, both hemispheres
290.2
2184
Male, age 76, both hemispheres
285.0
Locus coeruleus nTPM: 384.9
2720
Male, age 74, both hemispheres
458.5
2014
Male, age 55, unknown
430.8
2123
Female, age 91, both hemispheres
418.2
1980
Male, age 76, both hemispheres
372.2
2162
Male, age 80, both hemispheres
354.2
2317
Female, age 72, unknown
341.4
2788
Male, age 74, unknown
318.7
Medial parabrachial nucleus nTPM: 322.1
2170
Female, age 91, both hemispheres
366.5
2854
Male, age 80, both hemispheres
356.5
2156
Male, age 61, both hemispheres
298.2
2463
Female, age 85, right hemisphere
296.1
2786
Male, age 76, both hemispheres
293.2
Medial periolivary nuclei nTPM: 311.9
2171
Female, age 85, both hemispheres
377.9
2063
Male, age 76, both hemispheres
366.7
2791
Male, age 74, right hemisphere
281.3
2081
Male, age 80, both hemispheres
267.6
2458
Female, age 91, both hemispheres
266.2
Motor facial nucleus nTPM: 318.8
2365
Male, age 74, right hemisphere
367.5
2062
Male, age 76, both hemispheres
363.6
2697
Female, age 85, both hemispheres
344.1
2795
Female, age 91, both hemispheres
307.5
2126
Male, age 61, both hemispheres
277.9
2327
Male, age 80, both hemispheres
252.4
Motor trigeminal nucleus nTPM: 280.9
2560
Male, age 74, both hemispheres
316.6
2079
Male, age 80, both hemispheres
286.5
2335
Male, age 61, both hemispheres
285.9
2309
Male, age 76, both hemispheres
269.3
2321
Female, age 91, both hemispheres
246.4
Nuclei of the trapezoid body nTPM: 329.2
2159
Male, age 61, both hemispheres
377.2
1983
Male, age 76, both hemispheres
359.8
2735
Female, age 85, both hemispheres
350.2
2368
Female, age 91, both hemispheres
284.2
2166
Male, age 80, both hemispheres
274.6
Nucleus raphe magnus nTPM: 339.1
2172
Female, age 85, both hemispheres
416.6
2160
Male, age 61, both hemispheres
388.8
2455
Male, age 74, both hemispheres
342.1
2051
Male, age 76, both hemispheres
323.8
2328
Male, age 80, both hemispheres
292.2
2459
Female, age 91, both hemispheres
271.1
Paramedian reticular nucleus nTPM: 323.2
2050
Female, age 85, both hemispheres
413.3
2057
Male, age 80, both hemispheres
313.5
2313
Male, age 61, both hemispheres
308.0
2052
Male, age 76, both hemispheres
257.9
Pedunculopontine tegmental nucleus nTPM: 313.2
1921
Female, age 85, both hemispheres
348.9
2334
Male, age 80, both hemispheres
310.6
2338
Male, age 61, both hemispheres
280.1
Pontine nuclei nTPM: 345.3
2787
Female, age 85, both hemispheres
469.0
1863
Male, age 55, unknown
421.0
1968
Male, age 76, left hemisphere
351.4
2727
Male, age 61, right hemisphere
332.5
2109
Female, age 72, unknown
331.3
2454
Male, age 74, left hemisphere
307.9
2319
Female, age 91, both hemispheres
283.9
2115
Male, age 80, left hemisphere
265.5
Pontine raphe nucleus nTPM: 338.8
2122
Female, age 85, midline
353.8
2853
Male, age 76, midline
323.9
Posteroventral cochlear nucleus nTPM: 271.0
2752
Female, age 85, both hemispheres
324.8
2070
Male, age 76, both hemispheres
284.9
2371
Male, age 61, both hemispheres
281.2
2341
Male, age 80, both hemispheres
239.5
2135
Female, age 91, both hemispheres
224.7
Principal sensory trigeminal nucleus nTPM: 314.6
2158
Male, age 61, both hemispheres
388.3
2008
Male, age 80, left hemisphere
302.6
2367
Female, age 91, left hemisphere
292.6
2324
Male, age 76, both hemispheres
275.1
Reticular pontine nucleus, caudal nTPM: 280.7
2092
Male, age 76, both hemispheres
297.9
2559
Male, age 74, both hemispheres
283.3
2332
Male, age 80, right hemisphere
282.8
2457
Female, age 91, both hemispheres
258.8
Reticular pontine nucleus, oral nTPM: 335.4
2361
Male, age 74, both hemispheres
365.7
1939
Male, age 80, both hemispheres
355.7
2012
Female, age 85, both hemispheres
354.9
2167
Male, age 76, both hemispheres
317.6
2366
Female, age 91, both hemispheres
283.0
Reticulotegmental nucleus nTPM: 299.3
2452
Male, age 74, both hemispheres
309.4
2322
Female, age 91, both hemispheres
304.2
2325
Male, age 76, both hemispheres
296.9
2333
Male, age 80, both hemispheres
286.8
Spinal trigeminal nucleus, oral nTPM: 288.5
1978
Male, age 76, both hemispheres
305.0
2737
Female, age 85, both hemispheres
287.4
2164
Male, age 80, both hemispheres
273.0
Subcoeruleus area nTPM: 323.3
2323
Female, age 91, left hemisphere
366.5
1958
Male, age 80, both hemispheres
346.3
2369
Female, age 85, left hemisphere
317.5
2089
Male, age 76, left hemisphere
295.0
2451
Male, age 74, both hemispheres
291.1
Superior olive nTPM: 329.4
1875
Female, age 85, both hemispheres
406.7
2364
Male, age 74, right hemisphere
355.2
2020
Male, age 76, both hemispheres
310.1
2561
Female, age 91, both hemispheres
296.8
2329
Male, age 80, right hemisphere
278.1
Ventral periolivary nuclei nTPM: 317.9
2130
Female, age 85, both hemispheres
395.8
2165
Male, age 80, both hemispheres
330.6
2023
Male, age 76, both hemispheres
290.0
2794
Female, age 91, left hemisphere
255.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 322.9
2840
Female, age 85, both hemispheres
387.4
2359
Male, age 61, both hemispheres
334.9
2449
Male, age 74, both hemispheres
320.6
1959
Male, age 76, both hemispheres
317.6
2456
Female, age 91, both hemispheres
295.9
2161
Male, age 80, both hemispheres
281.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
206.9
Pig sample
Sample description
nTPM
Pons nTPM: 206.9
Samples: 4
Max nTPM: 265.8
Min nTPM: 176.1
Sample A
Female
265.8
Sample B
Female
176.1
Sample C
Male
198.7
Sample D
Male
187.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.