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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARAF is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
109.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
100.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
100.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
85.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
85.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
84.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
78.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
77.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
75.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
73.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
72.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
70.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
69.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
68.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
68.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
68.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
67.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
66.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
65.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
62.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
62.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
61.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
60.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
59.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
57.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
56.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
55.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
54.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
54.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
53.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
53.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
52.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
51.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
50.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
50.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
48.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
47.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
46.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
45.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
44.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
44.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
41.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
41.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
40.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
40.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
39.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
37.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
35.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
33.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
32.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
30.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
30.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
29.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
26.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
26.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
26.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
25.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
24.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
21.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
20.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
16.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
14.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
12.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARAF is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
121.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
97.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
82.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
79.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
72.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
69.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
66.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
64.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
62.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
61.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
59.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
57.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
56.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
56.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
55.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
55.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
55.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
55.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
54.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
54.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
54.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
54.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
54.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
53.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
52.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
52.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
52.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
52.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
52.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
51.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
51.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
51.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
51.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
50.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
50.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
50.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
50.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
50.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
50.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
50.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
50.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
50.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
50.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
50.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
50.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
49.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
49.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
49.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
49.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
49.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
49.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
49.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
49.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
49.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
48.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
48.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
48.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
48.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
48.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
48.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
47.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
47.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
47.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
47.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
47.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
47.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
47.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
47.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
47.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
47.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
47.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
47.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
47.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
47.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
46.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
46.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
46.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
46.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
46.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
46.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
46.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
46.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
46.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
46.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
46.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
46.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
46.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
46.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
46.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
46.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
46.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
45.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
45.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
45.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
45.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
45.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
45.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
45.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
45.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
45.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
45.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
44.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
44.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
44.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
44.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
44.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
44.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
44.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
44.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
43.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
43.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
43.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
43.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
43.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
43.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
43.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
43.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
43.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
43.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
43.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
43.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
43.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
43.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
43.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
43.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
43.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
43.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
43.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
42.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
42.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
42.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
42.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
42.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
42.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
42.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
42.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
42.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
42.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
42.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
42.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
41.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
41.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
41.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
41.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
41.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
41.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
41.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
41.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
41.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
41.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
41.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
41.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
41.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
40.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
40.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
40.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
40.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
40.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
40.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
40.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
40.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
40.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
40.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
40.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
40.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
40.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
40.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
40.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
40.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
40.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
40.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
40.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
40.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
40.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
40.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
40.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
40.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
40.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
40.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
40.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
39.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
39.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
39.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
39.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
39.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
39.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
39.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
39.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
39.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
39.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
39.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
39.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
39.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
39.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
39.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
39.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
39.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
38.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
38.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
38.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
38.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
38.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
38.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
38.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
38.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
38.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
38.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
38.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
38.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
38.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
38.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
38.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
37.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
37.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
37.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
37.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
37.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
37.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
37.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
37.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
37.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
37.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
36.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
36.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
36.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
36.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
36.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
36.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
36.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
36.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
36.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
36.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
36.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
36.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
36.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
36.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
36.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
36.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
36.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
36.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
36.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
36.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
36.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
36.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
36.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
36.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
36.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
36.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
36.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
36.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
35.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
35.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
35.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
35.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
35.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
35.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
35.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
35.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
35.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
35.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
35.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
35.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
35.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
35.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
35.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
35.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
35.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
35.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
35.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
35.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
35.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
35.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
34.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
34.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
34.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
34.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
34.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
34.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
34.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
34.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
34.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
34.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
34.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
34.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
34.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
34.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
33.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
33.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
33.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
33.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
33.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
33.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
33.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
33.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
33.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
33.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
33.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
33.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
32.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
32.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
32.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
32.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
32.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
32.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
32.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
32.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
32.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
32.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
32.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
32.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
32.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
32.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
32.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
32.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
32.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
32.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
31.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
31.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
31.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
31.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
31.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
31.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
31.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
31.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
31.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
31.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
31.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
31.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
30.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
30.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
30.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
30.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
30.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
30.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
30.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
30.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
30.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
30.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
30.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
30.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
30.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
30.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
30.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
30.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
30.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
30.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
30.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
30.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
29.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
29.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
29.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
29.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
29.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
29.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
29.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
28.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
28.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
28.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
28.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
28.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
28.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
28.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
28.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
27.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
27.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
27.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
27.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
27.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
27.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
27.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
27.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
27.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
27.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
26.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
26.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
26.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
26.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
26.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
26.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
26.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
26.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
25.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
25.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
25.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
25.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
25.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
25.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
25.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
24.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
24.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
24.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
24.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
24.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
24.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
24.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
24.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
24.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
24.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
24.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
24.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
23.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
23.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
23.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
23.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
23.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
23.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
23.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
23.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
23.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
22.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
22.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
22.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
22.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
22.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
22.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
22.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
22.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
21.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
21.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
21.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
21.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
21.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
21.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
21.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
21.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
21.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
21.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
21.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
20.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
20.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
20.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
20.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
20.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
20.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
20.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
20.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
19.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
19.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
19.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
19.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
19.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
18.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
18.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
18.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
18.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
18.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
17.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
17.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
17.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
17.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
17.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
17.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
17.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
17.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
17.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
16.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
16.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
16.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
16.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
16.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
15.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
15.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
15.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
15.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
15.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
15.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
15.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
15.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
14.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
14.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
14.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
14.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
14.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
14.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
13.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
13.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
13.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
13.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
13.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
13.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
13.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
12.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
12.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
12.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
11.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
11.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
11.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
11.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
9.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
7.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
7.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
5.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARAF is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
76.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
61.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
59.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
59.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
55.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
53.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
52.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
50.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
50.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
48.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
48.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
47.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
47.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
45.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
45.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
45.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
44.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
44.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
44.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
43.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
43.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
42.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
42.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
42.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
42.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
42.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
42.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
41.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
41.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
41.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
41.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
40.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
40.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
40.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
40.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
39.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
39.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
39.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
39.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
38.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
38.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
38.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
37.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
37.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
37.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
37.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
37.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
37.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
36.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
36.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
36.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
36.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
35.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
35.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
35.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
35.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
35.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
35.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
34.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
34.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
34.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
34.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
33.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
33.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
32.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
32.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
32.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
32.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
31.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
31.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
31.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
30.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
30.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
30.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
29.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
29.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
29.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
28.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
28.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
27.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
26.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
26.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
26.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
26.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
25.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
24.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
24.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
24.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
24.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
24.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
23.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
23.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
23.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
19.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
18.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
15.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARAF is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
86.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
80.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
79.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
76.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
71.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
70.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
69.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
65.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
65.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
64.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
63.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
63.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
61.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
58.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
56.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
56.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
56.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
56.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
55.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
55.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
55.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
55.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
55.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
54.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
54.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
53.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
53.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
53.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
53.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
52.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
52.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
52.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
52.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
51.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
51.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
50.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
50.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
50.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
48.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
48.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
48.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
48.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
47.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
47.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
47.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
46.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
46.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
46.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
45.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
45.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
45.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
45.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
44.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
44.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
44.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
44.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
44.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
43.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
43.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
43.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
43.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
43.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
43.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
42.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
42.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
42.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
42.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
42.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
42.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
42.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
42.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
41.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
41.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
41.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
41.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
41.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
41.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
40.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
40.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
40.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
40.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
40.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
40.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
39.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
39.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
39.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
39.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
39.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
39.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
39.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
38.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
38.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
38.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
38.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
38.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
38.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
38.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
37.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
37.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
37.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
37.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
37.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
37.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
36.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
36.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
36.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
36.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
36.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
36.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
35.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
35.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
35.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
35.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
35.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
34.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
34.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
34.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
34.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
34.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
34.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
34.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
33.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
33.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
33.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
33.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
33.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
33.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
32.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
32.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
32.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
32.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
32.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
32.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
31.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
31.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
31.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
31.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
31.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
31.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
31.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
31.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
31.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
30.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
30.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
30.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
30.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
30.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
30.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
30.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
30.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
30.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
30.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
30.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
30.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
29.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
29.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
29.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
29.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
28.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
28.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
28.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
28.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
28.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
28.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
28.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
28.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
28.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
27.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
27.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
27.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
27.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
27.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
27.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
26.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
26.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
26.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
26.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
26.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
26.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
26.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
26.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
25.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
25.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
25.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
25.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
24.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
24.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
23.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
23.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
23.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
23.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
23.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
23.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
23.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
23.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
22.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
22.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
22.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
22.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
22.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
22.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
22.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
22.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
22.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
21.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
21.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
20.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
20.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
20.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
20.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
20.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
20.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
20.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
20.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
19.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
19.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
19.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
19.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
18.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
18.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
18.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
18.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
18.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
18.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
18.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
18.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
17.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
17.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
17.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
17.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
17.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
17.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
17.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
16.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
16.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
15.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
15.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
15.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
15.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
15.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
15.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
15.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
15.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
15.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
15.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
15.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
14.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
14.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
14.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
14.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
13.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
12.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
12.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
12.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
12.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
11.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
11.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
9.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
9.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
9.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
8.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
8.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
7.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
5.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
3.7
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078660003
Tumor
0.8
CPT0079180003
Tumor
0.7
CPT0001540009
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0015730003
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0088690003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0012280003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0088550004
Tumor
0.3
CPT0002270011
Tumor
0.3
CPT0009000003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0012770003
Normal
0.2
CPT0001260009
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0086950003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0078840001
Normal
0.2
CPT0025050003
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0007870001
Normal
0.2
CPT0006440003
Tumor
0.2
CPT0001340003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0026420001
Normal
0.2
CPT0009080003
Normal
0.2
CPT0065810003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0065450001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0086360003
Tumor
0.2
CPT0025060001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0015810003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0001230001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0078940001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0088570001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0014370004
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0006530001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0025610001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0078510003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0012090003
Normal
0.1
CPT0069010001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0088710001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0000890001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0025920001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0078530001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0086970003
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0064370003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0075130003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0012900004
Tumor
-0.1
CPT0065690003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0011410003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0066470004
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0085670003
Tumor
-0.3
CPT0081880003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0025290003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0025170003
Tumor
-0.4
CPT0078800003
Tumor
-0.4
CPT0092290003
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.