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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CAPZB is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
89.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
520.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
420.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
311.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
250.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
215.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
212.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
195.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
194.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
193.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
186.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
171.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
170.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
166.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
161.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
160.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
154.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
154.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
154.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
154.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
153.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
153.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
153.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
152.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
152.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
150.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
149.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
148.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
145.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
144.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
144.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
143.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
143.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
138.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
137.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
136.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
135.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
135.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
133.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
132.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
132.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
131.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
130.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
130.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
129.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
129.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
128.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
128.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
128.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
128.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
127.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
126.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
125.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
125.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
123.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
121.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
121.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
121.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
119.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
119.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
119.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
118.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
118.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
117.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
116.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
116.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
115.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
115.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
115.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
114.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
114.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
114.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
113.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
113.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
112.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
110.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
110.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
110.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
109.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
109.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
109.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
108.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
108.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
107.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
107.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
106.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
106.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
106.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
106.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
106.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
106.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
105.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
104.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
104.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
104.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
104.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
103.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
103.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
102.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
101.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
101.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
101.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
100.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
100.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
100.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
100.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
99.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
98.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
98.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
97.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
97.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
96.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
96.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
96.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
95.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
95.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
95.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
95.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
94.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
94.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
94.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
94.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
93.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
93.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
93.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
93.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
92.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
92.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
92.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
91.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
91.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
91.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
90.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
90.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
89.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
89.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
89.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
89.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
89.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
89.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
89.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
88.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
88.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
88.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
88.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
87.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
87.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
87.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
86.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
86.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
86.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
86.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
85.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
85.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
85.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
85.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
85.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
85.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
84.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
84.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
84.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
84.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
84.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
84.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
83.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
83.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
83.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
83.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
82.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
82.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
82.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
81.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
81.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
81.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
81.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
81.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
80.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
80.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
80.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
80.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
80.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
80.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
80.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
79.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
79.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
79.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
79.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
79.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
79.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
79.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
79.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
78.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
78.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
78.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
78.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
77.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
77.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
77.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
77.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
77.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
77.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
77.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
77.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
76.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
76.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
76.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
76.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
76.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
76.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
76.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
75.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
75.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
75.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
75.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
75.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
74.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
74.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
74.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
74.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
74.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
74.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
73.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
73.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
73.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
73.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
72.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
72.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
72.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
72.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
71.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
71.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
71.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
70.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
70.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
70.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
70.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
70.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
70.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
69.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
69.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
69.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
69.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
69.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
69.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
68.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
68.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
68.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
68.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
67.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
67.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
67.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
66.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
66.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
66.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
66.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
65.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
65.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
65.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
65.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
65.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
64.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
64.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
64.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
64.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
64.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
63.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
63.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
63.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
63.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
62.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
62.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
62.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
62.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
62.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
61.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
61.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
61.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
61.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
61.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
60.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
60.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
60.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
60.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
60.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
60.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
60.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
60.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
60.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
59.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
59.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
59.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
58.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
58.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
58.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
58.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
58.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
57.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
57.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
57.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
57.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
57.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
57.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
56.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
56.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
56.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
56.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
56.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
55.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
55.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
55.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
55.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
54.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
54.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
54.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
54.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
54.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
54.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
53.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
53.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
53.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
52.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
52.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
52.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
52.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
52.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
51.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
51.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
50.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
50.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
50.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
50.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
49.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
49.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
49.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
49.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
48.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
48.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
47.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
47.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
47.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
45.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
45.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
45.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
45.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
44.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
44.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
43.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
43.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
43.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
42.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
41.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
41.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
39.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
39.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
38.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
37.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
36.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
35.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
34.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
34.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
33.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
30.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CAPZB is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
77.5
Number of samples
231
Samples
Sample
Description
TPM
DO45277
0 years, male, NA, stage:3, alive, 600 days
211.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
208.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
194.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
189.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
187.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
180.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
176.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
176.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
172.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
164.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
157.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
157.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
151.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
151.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
148.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
146.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
145.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
142.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
135.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
130.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
128.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
127.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
127.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
124.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
124.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
121.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
121.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
120.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
118.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
117.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
117.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
111.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
111.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
108.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
107.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
104.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
104.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
103.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
103.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
102.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
102.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
102.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
102.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
101.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
101.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
100.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
100.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
97.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
96.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
96.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
96.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
95.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
94.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
93.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
91.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
91.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
91.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
89.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
89.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
89.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
88.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
88.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
88.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
87.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
87.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
87.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
86.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
86.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
85.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
84.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
84.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
84.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
84.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
84.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
83.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
82.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
81.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
80.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
80.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
80.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
80.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
80.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
80.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
79.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
79.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
78.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
78.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
78.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
77.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
76.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
76.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
76.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
75.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
75.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
74.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
74.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
74.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
74.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
74.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
73.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
73.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
73.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
73.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
72.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
72.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
71.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
71.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
71.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
70.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
70.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
70.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
70.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
70.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
70.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
69.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
69.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
69.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
69.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
69.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
69.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
69.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
68.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
67.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
67.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
66.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
66.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
66.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
66.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
66.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
65.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
65.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
65.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
64.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
64.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
64.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
63.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
63.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
62.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
62.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
62.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
61.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
61.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
60.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
60.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
60.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
60.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
60.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
59.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
59.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
58.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
58.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
58.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
58.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
58.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
58.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
58.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
58.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
58.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
58.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
57.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
57.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
57.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
57.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
57.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
57.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
56.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
55.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
55.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
55.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
54.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
54.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
53.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
53.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
53.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
53.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
52.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
52.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
51.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
51.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
51.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
50.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
49.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
49.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
49.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
48.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
48.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
48.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
48.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
47.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
47.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
46.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
46.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
46.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
46.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
45.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
45.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
45.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
45.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
45.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
45.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
45.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
44.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
43.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
43.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
43.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
42.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
42.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
41.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
41.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
40.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
40.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
40.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
40.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
39.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
39.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
39.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
39.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
39.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
38.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
38.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
37.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
36.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
35.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
35.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
35.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
33.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
30.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
28.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
27.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
22.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
22.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
917
Tumor
0.6
661
Tumor
0.5
536
Normal
0.5
283
Tumor
0.5
311
Tumor
0.5
425
Tumor
0.4
492
Normal
0.4
524
Normal
0.4
916
Normal
0.4
211
Tumor
0.4
478
Normal
0.4
943
Tumor
0.4
724
Normal
0.4
415
Tumor
0.3
538
Normal
0.3
727
Tumor
0.3
516
Normal
0.3
925
Tumor
0.3
212
Normal
0.3
966
Normal
0.3
573
Tumor
0.3
528
Normal
0.3
434
Normal
0.3
535
Tumor
0.3
978
Normal
0.3
1021
Tumor
0.3
911
Tumor
0.3
518
Normal
0.2
525
Tumor
0.2
1015
Tumor
0.2
915
Tumor
0.2
231
Tumor
0.2
952
Normal
0.2
686
Normal
0.2
554
Normal
0.2
125
Tumor
0.2
963
Tumor
0.2
852
Normal
0.2
447
Tumor
0.2
716
Normal
0.2
823
Tumor
0.2
498
Normal
0.2
778
Normal
0.2
721
Tumor
0.2
493
Tumor
0.2
223
Tumor
0.2
513
Tumor
0.2
1027
Tumor
0.2
224
Normal
0.2
1014
Normal
0.2
926
Normal
0.2
954
Normal
0.2
472
Normal
0.2
483
Tumor
0.2
953
Tumor
0.2
924
Normal
0.2
284
Normal
0.2
696
Normal
0.2
481
Tumor
0.2
984
Normal
0.2
737
Tumor
0.2
484
Normal
0.2
494
Normal
0.2
448
Normal
0.2
482
Normal
0.2
185
Tumor
0.2
444
Normal
0.2
1028
Normal
0.2
695
Tumor
0.2
714
Normal
0.2
685
Tumor
0.2
883
Tumor
0.2
527
Tumor
0.2
958
Normal
0.2
741
Tumor
0.2
857
Tumor
0.2
982
Normal
0.2
526
Normal
0.2
1045
Tumor
0.2
461
Tumor
0.1
1042
Normal
0.1
951
Tumor
0.1
488
Normal
0.1
514
Normal
0.1
937
Tumor
0.1
918
Normal
0.1
785
Tumor
0.1
851
Tumor
0.1
487
Tumor
0.1
142
Normal
0.1
327
Tumor
0.1
546
Normal
0.1
944
Normal
0.1
617
Tumor
0.1
861
Tumor
0.1
816
Normal
0.1
882
Normal
0.1
728
Normal
0.1
517
Tumor
0.1
1026
Normal
0.1
922
Normal
0.1
755
Tumor
0.1
968
Normal
0.1
491
Tumor
0.1
1022
Normal
0.1
474
Normal
0.1
355
Tumor
0.1
956
Normal
0.1
738
Normal
0.1
713
Tumor
0.1
395
Tumor
0.1
938
Normal
0.1
364
Normal
0.1
955
Tumor
0.1
412
Normal
0.1
365
Tumor
0.1
868
Normal
0.1
913
Tumor
0.1
387
Tumor
0.1
923
Tumor
0.1
262
Normal
0.1
261
Tumor
0.1
192
Normal
0.1
964
Normal
0.1
462
Normal
0.1
343
Tumor
0.1
126
Normal
0.1
1044
Normal
0.1
628
Normal
0.1
1013
Tumor
0.1
867
Tumor
0.1
697
Tumor
0.1
1031
Tumor
0.1
146
Normal
0.1
976
Normal
0.1
824
Normal
0.1
1032
Normal
0.1
756
Normal
0.1
416
Normal
0.1
878
Normal
0.1
515
Tumor
0.1
866
Normal
0.1
746
Normal
0.1
497
Tumor
0.1
228
Normal
0.1
723
Tumor
0.1
328
Normal
0.1
977
Tumor
0.1
213
Tumor
0.1
272
Normal
0.1
1016
Normal
0.1
138
Normal
0.1
563
Tumor
0.1
477
Tumor
0.1
218
Normal
0.1
874
Normal
0.1
786
Normal
0.1
362
Normal
0.1
534
Normal
0.0
965
Tumor
0.0
383
Tumor
0.0
268
Normal
0.0
171
Tumor
0.0
635
Tumor
0.0
1041
Tumor
0.0
286
Normal
0.0
137
Tumor
0.0
545
Tumor
0.0
385
Tumor
0.0
375
Tumor
0.0
616
Normal
0.0
257
Tumor
0.0
698
Normal
0.0
312
Normal
0.0
722
Normal
0.0
384
Normal
0.0
914
Normal
0.0
356
Normal
0.0
135
Tumor
0.0
455
Tumor
0.0
975
Tumor
0.0
744
Normal
0.0
352
Normal
0.0
814
Normal
0.0
188
Normal
0.0
981
Tumor
0.0
858
Normal
0.0
558
Normal
0.0
1046
Normal
0.0
187
Tumor
0.0
817
Tumor
0.0
217
Tumor
0.0
777
Tumor
0.0
864
Normal
0.0
298
Normal
0.0
663
Tumor
0.0
421
Tumor
0.0
662
Normal
0.0
533
Tumor
0.0
443
Tumor
0.0
471
Tumor
0.0
567
Tumor
0.0
557
Tumor
0.0
862
Normal
0.0
863
Tumor
0.0
111
Normal
0.0
742
Normal
0.0
386
Normal
0.0
124
Normal
0.0
131
Tumor
0.0
332
Normal
0.0
818
Normal
0.0
366
Normal
0.0
344
Normal
0.0
367
Tumor
0.0
196
Normal
0.0
278
Normal
0.0
664
Normal
0.0
214
Normal
0.0
627
Tumor
0.0
141
Tumor
0.0
553
Tumor
0.0
132
Normal
0.0
881
Tumor
0.0
136
Normal
0.0
912
Normal
0.0
1043
Tumor
0.0
376
Normal
0.0
432
Normal
0.0
431
Tumor
0.0
636
Normal
0.0
436
Normal
0.0
813
Tumor
-0.1
451
Tumor
-0.1
884
Normal
-0.1
921
Tumor
-0.1
715
Tumor
-0.1
672
Normal
-0.1
433
Tumor
-0.1
113
Tumor
-0.1
114
Normal
-0.1
571
Tumor
-0.1
618
Normal
-0.1
368
Normal
-0.1
341
Tumor
-0.1
615
Tumor
-0.1
467
Tumor
-0.1
195
Tumor
-0.1
873
Tumor
-0.1
642
Normal
-0.1
473
Tumor
-0.1
568
Normal
-0.1
468
Normal
-0.1
313
Tumor
-0.1
465
Tumor
-0.1
112
Tumor
-0.1
232
Normal
-0.1
148
Normal
-0.1
297
Tumor
-0.1
983
Tumor
-0.1
572
Normal
-0.1
277
Tumor
-0.1
222
Normal
-0.1
745
Tumor
-0.1
666
Normal
-0.1
363
Tumor
-0.1
391
Tumor
-0.1
392
Normal
-0.1
428
Normal
-0.1
574
Normal
-0.1
466
Normal
-0.1
147
Tumor
-0.1
162
Normal
-0.1
422
Normal
-0.1
865
Tumor
-0.1
258
Normal
-0.1
396
Normal
-0.1
186
Normal
-0.1
424
Normal
-0.1
314
Normal
-0.1
537
Tumor
-0.1
427
Tumor
-0.1
128
Normal
-0.2
172
Normal
-0.2
394
Normal
-0.2
361
Tumor
-0.2
564
Normal
-0.2
123
Tumor
-0.2
353
Tumor
-0.2
648
Normal
-0.2
435
Tumor
-0.2
271
Tumor
-0.2
354
Normal
-0.2
414
Normal
-0.2
463
Tumor
-0.2
815
Tumor
-0.2
1025
Tumor
-0.2
743
Tumor
-0.2
358
Normal
-0.2
456
Normal
-0.2
342
Normal
-0.2
161
Tumor
-0.2
426
Normal
-0.2
877
Tumor
-0.2
423
Tumor
-0.2
671
Tumor
-0.2
145
Tumor
-0.2
464
Normal
-0.2
388
Normal
-0.2
445
Tumor
-0.2
641
Tumor
-0.3
446
Normal
-0.3
127
Tumor
-0.3
285
Tumor
-0.3
331
Tumor
-0.3
227
Tumor
-0.3
967
Tumor
-0.3
647
Tumor
-0.3
523
Tumor
-0.3
452
Normal
-0.3
413
Tumor
-0.3
221
Tumor
-0.3
267
Tumor
-0.3
665
Tumor
-0.3
191
Tumor
-0.3
351
Tumor
-0.4
957
Tumor
-0.4
411
Tumor
-0.4
357
Tumor
-0.5
393
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
