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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPD52 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
140.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
104.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
98.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
91.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
84.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
79.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
72.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
64.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
62.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
61.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
60.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
59.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
56.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
55.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
54.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
53.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
50.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
50.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
49.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
48.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
44.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
44.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
43.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
43.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
41.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
40.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
39.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
37.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
37.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
36.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
35.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
35.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
35.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
32.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
31.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
31.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
30.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
29.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
28.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
28.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
28.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
27.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
27.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
27.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
27.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
26.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
26.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
24.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
22.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
20.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
19.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
18.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
18.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
17.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
16.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
16.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
15.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
13.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
12.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
11.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
9.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
2.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPD52 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
635.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
84.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
81.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
67.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
65.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
64.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
63.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
59.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
58.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
56.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
55.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
52.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
52.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
50.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
50.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
49.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
49.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
48.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
47.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
47.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
46.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
45.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
45.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
43.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
43.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
43.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
42.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
42.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
42.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
42.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
41.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
41.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
41.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
41.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
41.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
41.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
40.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
40.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
40.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
40.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
40.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
40.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
40.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
40.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
39.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
39.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
39.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
38.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
38.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
38.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
38.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
38.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
38.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
37.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
37.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
37.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
37.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
37.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
37.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
37.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
36.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
36.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
36.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
36.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
36.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
35.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
35.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
35.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
35.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
35.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
35.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
35.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
34.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
34.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
34.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
34.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
34.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
34.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
34.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
34.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
34.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
33.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
33.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
33.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
32.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
32.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
32.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
32.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
32.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
32.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
31.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
31.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
31.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
31.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
31.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
31.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
31.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
31.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
31.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
31.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
31.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
31.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
31.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
30.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
30.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
30.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
30.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
30.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
30.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
30.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
29.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
29.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
29.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
29.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
29.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
29.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
29.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
29.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
29.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
29.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
29.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
29.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
29.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
29.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
29.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
29.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
29.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
29.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
29.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
28.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
28.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
28.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
28.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
28.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
28.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
28.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
28.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
28.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
28.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
28.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
28.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
28.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
28.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
27.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
27.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
27.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
27.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
27.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
27.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
27.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
27.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
27.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
27.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
27.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
27.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
27.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
27.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
26.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
26.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
26.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
26.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
26.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
26.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
26.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
26.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
26.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
26.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
26.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
26.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
26.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
26.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
26.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
26.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
25.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
25.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
25.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
25.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
25.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
25.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
25.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
25.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
25.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
25.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
25.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
25.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
25.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
25.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
25.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
25.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
25.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
25.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
25.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
25.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
25.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
24.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
24.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
24.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
24.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
24.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
24.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
24.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
24.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
24.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
24.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
24.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
24.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
24.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
24.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
24.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
24.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
24.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
24.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
24.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
24.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
24.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
24.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
24.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
24.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
24.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
24.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
24.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
23.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
23.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
23.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
23.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
23.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
23.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
23.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
23.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
23.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
23.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
23.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
23.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
23.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
23.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
23.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
23.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
23.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
23.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
23.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
23.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
23.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
22.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
22.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
22.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
22.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
22.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
22.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
22.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
22.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
22.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
22.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
22.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
22.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
22.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
22.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
22.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
22.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
22.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
22.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
22.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
22.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
22.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
22.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
22.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
21.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
21.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
21.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
21.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
21.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
21.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
21.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
21.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
21.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
21.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
21.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
21.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
21.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
21.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
21.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
21.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
21.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
21.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
21.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
21.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
21.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
21.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
20.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
20.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
20.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
20.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
20.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
20.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
20.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
20.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
20.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
20.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
20.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
20.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
20.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
20.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
20.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
20.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
20.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
20.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
20.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
20.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
19.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
19.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
19.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
19.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
19.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
19.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
19.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
19.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
19.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
19.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
19.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
19.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
19.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
19.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
19.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
19.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
19.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
19.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
19.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
19.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
18.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
18.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
18.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
18.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
18.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
18.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
18.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
18.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
18.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
18.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
18.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
18.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
18.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
18.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
18.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
18.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
18.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
18.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
18.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
17.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
17.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
17.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
17.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
17.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
17.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
17.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
17.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
17.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
17.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
17.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
17.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
17.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
17.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
17.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
17.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
17.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
17.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
17.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
16.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
16.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
16.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
16.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
16.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
16.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
16.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
16.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
16.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
16.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
16.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
16.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
16.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
16.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
16.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
16.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
15.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
15.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
15.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
15.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
15.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
15.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
15.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
15.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
15.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
15.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
15.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
15.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
15.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
15.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
15.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
15.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
14.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
14.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
14.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
14.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
14.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
14.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
14.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
14.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
14.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
14.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
14.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
14.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
14.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
14.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
14.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
14.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
13.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
13.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
13.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
13.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
13.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
13.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
13.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
13.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
13.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
13.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
13.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
13.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
13.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
13.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
13.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
13.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
13.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
13.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
12.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
12.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
12.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
12.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
12.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
12.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
12.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
11.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
11.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
11.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
11.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
11.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
10.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
10.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
10.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
10.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
10.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
10.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
9.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
9.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
9.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
9.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
9.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
9.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
9.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
9.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
8.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
8.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
7.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
7.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
6.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
4.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
3.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
1.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPD52 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
75.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
61.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
58.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
55.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
51.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
48.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
46.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
45.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
43.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
43.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
42.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
41.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
39.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
38.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
38.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
38.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
37.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
37.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
37.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
37.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
37.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
36.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
35.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
35.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
35.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
35.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
35.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
35.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
34.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
34.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
33.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
33.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
33.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
32.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
32.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
32.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
31.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
31.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
31.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
30.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
30.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
29.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
29.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
28.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
28.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
26.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
26.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
26.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
26.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
26.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
26.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
26.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
26.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
24.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
24.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
24.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
24.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
24.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
23.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
23.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
23.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
23.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
23.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
23.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
22.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
22.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
22.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
22.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
22.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
21.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
21.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
21.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
20.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
20.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
19.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
19.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
19.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
19.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
18.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
18.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
17.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
17.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
17.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
17.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
16.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
16.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
15.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
14.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
14.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
13.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
12.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
8.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPD52 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
101.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
89.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
70.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
66.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
52.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
49.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
46.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
46.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
42.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
42.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
40.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
38.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
35.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
33.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
33.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
32.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
30.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
30.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
30.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
30.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
29.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
29.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
28.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
27.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
27.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
26.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
26.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
26.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
26.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
26.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
24.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
24.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
24.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
24.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
24.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
24.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
24.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
23.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
22.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
22.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
22.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
22.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
22.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
21.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
21.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
21.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
20.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
20.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
20.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
20.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
20.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
20.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
19.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
19.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
19.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
19.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
19.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
19.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
18.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
18.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
18.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
18.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
18.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
17.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
17.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
17.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
17.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
17.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
17.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
17.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
17.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
17.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
17.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
16.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
16.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
16.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
16.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
16.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
16.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
15.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
15.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
15.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
15.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
15.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
15.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
15.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
14.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
14.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
14.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
14.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
14.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
14.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
14.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
14.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
14.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
14.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
13.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
13.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
13.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
13.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
13.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
13.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
13.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
13.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
13.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
13.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
13.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
13.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
13.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
12.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
12.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
12.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
12.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
12.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
12.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
12.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
12.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
12.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
12.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
11.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
11.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
11.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
11.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
11.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
11.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
11.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
11.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
10.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
10.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
10.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
10.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
10.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
10.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
10.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
10.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
10.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
9.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
9.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
9.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
9.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
9.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
9.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
9.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
9.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
9.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
9.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
9.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
9.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
8.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
8.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
8.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
8.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
8.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
8.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
8.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
8.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
8.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
8.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
7.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
7.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
7.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
7.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
7.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
7.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
7.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
7.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
7.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
7.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
7.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
7.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
7.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
7.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
6.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
6.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
6.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
6.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
6.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
6.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
6.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
6.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
6.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
6.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
6.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
6.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
6.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
6.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
6.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
6.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
6.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
6.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
6.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
6.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
6.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
6.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
6.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
6.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
6.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
5.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
5.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
5.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
5.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
5.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
5.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
5.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
5.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
5.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
5.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
5.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
4.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
4.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
4.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
4.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
4.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
4.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
4.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
4.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
4.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
4.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
4.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
4.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
4.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
4.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
3.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
3.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
3.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
3.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
3.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
3.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
2.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
2.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
1.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
1.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
1.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
1.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
0.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001180009
Tumor
1.7
CPT0079180003
Tumor
1.1
CPT0012550003
Tumor
1.0
CPT0023350003
Tumor
1.0
CPT0002350011
Tumor
0.9
CPT0012180003
Tumor
0.7
CPT0086820003
Tumor
0.7
CPT0081880003
Tumor
0.6
CPT0088690003
Tumor
0.6
CPT0012080003
Tumor
0.5
CPT0012900004
Tumor
0.5
CPT0088550004
Tumor
0.5
CPT0025050003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0000640003
Tumor
0.3
CPT0078660003
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0079000001
Normal
0.3
CPT0001550001
Normal
0.3
CPT0086030003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0064370003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0078940001
Normal
0.2
CPT0089460004
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0014160003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0006730001
Normal
0.2
CPT0076350001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0014470001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0021240003
Tumor
0.2
CPT0012920003
Normal
0.1
CPT0009020003
Normal
0.1
CPT0086370003
Normal
0.1
CPT0012640003
Normal
0.1
CPT0079510001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0065450001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0086890003
Normal
0.1
CPT0025060001
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0002370001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0065750003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0026410003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0078530001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0010170001
Normal
0.0
CPT0077140001
Normal
-0.1
CPT0086360003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0069160003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0063640001
Normal
-0.2
CPT0079230003
Tumor
-0.2
CPT0063630003
Tumor
-0.2
CPT0023710001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0006900003
Tumor
-0.2
CPT0001510001
Normal
-0.2
CPT0025290003
Tumor
-0.2
CPT0063330001
Normal
-0.2
CPT0025580004
Tumor
-0.2
CPT0017850003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0013790003
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0011240003
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0001540009
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0012370003
Tumor
-0.2
CPT0001230001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0075170001
Normal
-0.3
CPT0001340003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0092800003
Normal
-0.3
CPT0078830003
Tumor
-0.3
CPT0075130003
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0012290003
Normal
-0.3
CPT0076330003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0000890001
Normal
-0.3
CPT0001270001
Normal
-0.3
CPT0000780007
Tumor
-0.4
CPT0088760003
Tumor
-0.4
CPT0065870003
Tumor
-0.4
CPT0065810003
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0085670003
Tumor
-0.4
CPT0077320001
Normal
-0.4
CPT0002270011
Tumor
-0.4
CPT0001220008
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0092790003
Tumor
-0.4
CPT0014370004
Tumor
-0.4
CPT0092190003
Normal
-0.4
CPT0025170003
Tumor
-0.4
CPT0084590001
Normal
-0.5
CPT0078510003
Tumor
-0.5
CPT0007860003
Tumor
-0.5
CPT0065930003
Tumor
-0.5
CPT0011410003
Tumor
-0.5
CPT0025350003
Tumor
-0.5
CPT0065820001
Normal
-0.5
CPT0086870003
Tumor
-0.5
CPT0065690003
Tumor
-0.6
CPT0023690003
Tumor
-0.6
CPT0077110003
Tumor
-0.6
CPT0092730003
Tumor
-0.6
CPT0081600003
Tumor
-0.6
CPT0066480003
Tumor
-0.6
CPT0015910003
Tumor
-0.6
CPT0084560003
Tumor
-0.6
CPT0009060003
Tumor
-0.7
CPT0078800003
Tumor
-0.8
CPT0081990003
Tumor
-0.8
CPT0075560003
Tumor
-0.8
CPT0088630003
Tumor
-0.8
CPT0075720003
Tumor
-0.9
CPT0088970003
Tumor
-1.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
