HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:36.8 nTPM
HPA Brain:9.8 nTPM
GTEx:36.8 nTPM
FANTOM5:67.9 Scaled Tags Per Million
Pig:35.3 nTPM
Mouse:49.7 nTPM
Allen mouse:19.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024652
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 9.8
Sample id Sample description nTPM
Hippocampus
nTPM: 9.8
1898 Male, age 80, left hemisphere 14.0
2148 Female, age 91, left hemisphere 12.5
2621 Female, age 67, right hemisphere 12.2
2529 Female, age 94, left hemisphere 8.4
1855 Male, age 76, left hemisphere 6.2
1911 Female, age 85, right hemisphere 5.8
Dentate gyrus
nTPM: 6.9
2531 Female, age 67, both hemispheres 8.8
2010 Male, age 76, both hemispheres 7.8
1927 Female, age 91, both hemispheres 7.2
2246 Female, age 85, both hemispheres 6.5
2530 Female, age 94, left hemisphere 5.8
2528 Male, age 74, both hemispheres 5.1
Entorhinal gyrus
nTPM: 9.8
2686 Male, age 75, right hemisphere 14.0
2764 Male, age 80, right hemisphere 10.0
2117 Female, age 91, right hemisphere 9.4
1938 Female, age 85, left hemisphere 9.0
2613 Female, age 94, left hemisphere 8.2
1787 Male, age 76, left hemisphere 8.0
Hippocampus, CA1
nTPM: 8.8
2749 Male, age 80, left hemisphere 13.5
2527 Male, age 74, both hemispheres 10.1
1873 Female, age 85, both hemispheres 8.2
2082 Female, age 91, right hemisphere 6.9
2045 Male, age 76, both hemispheres 5.1
Hippocampus, CA2
nTPM: 9.1
1963 Male, age 80, left hemisphere 16.3
1892 Male, age 76, both hemispheres 11.8
2113 Female, age 91, right hemisphere 8.6
1940 Female, age 85, left hemisphere 8.2
2249 Male, age 74, both hemispheres 4.9
2437 Female, age 94, left hemisphere 4.7
Hippocampus, CA3
nTPM: 7.8
1867 Male, age 76, both hemispheres 11.6
2620 Female, age 94, left hemisphere 9.5
2861 Female, age 67, both hemispheres 7.2
1891 Female, age 85, both hemispheres 6.9
2436 Male, age 74, both hemispheres 6.2
2137 Male, age 80, left hemisphere 5.7
Parahippocampal cortex
nTPM: 9.2
2692 Male, age 74, both hemispheres 14.4
1850 Male, age 80, both hemispheres 11.6
2622 Female, age 67, right hemisphere 10.7
1990 Female, age 91, right hemisphere 10.4
2250 Female, age 67, right hemisphere 8.9
2693 Female, age 94, both hemispheres 8.7
2245 Female, age 91, both hemispheres 7.3
2532 Female, age 72, left hemisphere 7.2
1933 Female, age 85, both hemispheres 7.0
2018 Male, age 76, both hemispheres 5.9
Perirhinal gyrus
nTPM: 9.2
1794 Male, age 80, right hemisphere 10.6
1841 Female, age 85, right hemisphere 9.9
2521 Female, age 94, right hemisphere 9.9
1847 Female, age 91, left hemisphere 9.2
2848 Male, age 76, right hemisphere 6.3
Subiculum
nTPM: 9.2
1901 Male, age 80, both hemispheres 12.0
2619 Male, age 74, both hemispheres 10.3
1977 Female, age 85, both hemispheres 9.5
2042 Male, age 76, both hemispheres 8.5
2438 Female, age 94, left hemisphere 7.6
2729 Female, age 91, right hemisphere 7.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 36.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.8
Samples: 197

Max nTPM: 59.7
Min nTPM: 24.6
Std nTPM: 6.4
Median nTPM: 36.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 59.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 56.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 52.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 51.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 51.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 51.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 51.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 49.6
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 49.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 48.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 48.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 67.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.9
FF:10169-103B7 60 years, female 73.7
FF:10153-102I9 76 years, female 62.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 35.3
Pig sample Sample description nTPM
Subiculum
nTPM: 32.7
Samples: 4

Max nTPM: 37.9
Min nTPM: 30.5
Sample A Female 37.9
Sample B Female 31.8
Sample C Male 30.5
Sample D Male 30.5
Dorsal hippocampus
nTPM: 35.3
Samples: 4

Max nTPM: 37.3
Min nTPM: 33.3
Sample A Female 36.8
Sample B Female 33.3
Sample C Male 37.3
Sample D Male 33.9
Entorhinal cortex
nTPM: 34.4
Samples: 4

Max nTPM: 39.3
Min nTPM: 29.7
Sample A Female 35.9
Sample B Female 39.3
Sample C Male 29.7
Sample D Male 32.6
Ventral hippocampus
nTPM: 33.6
Samples: 4

Max nTPM: 37.8
Min nTPM: 29.5
Sample A Female 31.1
Sample B Female 29.5
Sample C Male 36.0
Sample D Male 37.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 49.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.0
Samples: 4

Max nTPM: 46.9
Min nTPM: 43.9
Sample A Male 43.9
Sample B Male 44.5
Sample C Female 46.9
Sample D Female 44.6
Hippocampal formation
nTPM: 49.7
Samples: 4

Max nTPM: 51.9
Min nTPM: 46.3
Sample A Male 49.8
Sample B Male 50.6
Sample C Female 51.9
Sample D Female 46.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 19.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.4
67881765 Antisense, RP_040920_02_G03, Mouse strain C57BL/6J (56 days, male) 19.4

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