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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
35.3
nTPM
HPA Brain:
10.7
nTPM
GTEx:
35.3
nTPM
FANTOM5:
63.0
Scaled Tags Per Million
Pig:
32.2
nTPM
Mouse:
41.6
nTPM
Allen mouse:
21.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
10.7
Sample id
Sample description
nTPM
Amygdala nTPM: 10.7
2514
Male, age 75, right hemisphere
13.4
2814
Male, age 76, right hemisphere
13.3
2695
Female, age 67, right hemisphere
10.0
2517
Female, age 94, left hemisphere
9.2
1987
Female, age 91, left hemisphere
7.6
Basal amygdala nTPM: 8.3
2609
Male, age 75, right hemisphere
11.4
2243
Female, age 91, right hemisphere
8.7
2110
Male, age 80, left hemisphere
7.7
2685
Female, age 94, left hemisphere
7.7
1955
Male, age 76, both hemispheres
7.3
2827
Female, age 67, right hemisphere
6.8
Central amygdala nTPM: 9.0
1905
Male, age 76, both hemispheres
10.3
2515
Male, age 75, right hemisphere
9.1
2239
Male, age 80, left hemisphere
8.8
2826
Female, age 94, left hemisphere
8.5
2701
Female, age 91, right hemisphere
8.2
Corticomedial amygdala nTPM: 7.6
2829
Male, age 80, left hemisphere
9.9
2428
Male, age 75, right hemisphere
7.6
2429
Female, age 94, left hemisphere
7.6
2535
Female, age 67, right hemisphere
7.6
2242
Female, age 91, right hemisphere
7.1
2240
Male, age 76, both hemispheres
5.6
Lateral amygdala nTPM: 8.2
1883
Male, age 76, both hemispheres
10.6
2256
Male, age 80, left hemisphere
10.4
2516
Male, age 75, right hemisphere
9.9
2255
Female, age 91, right hemisphere
7.9
2534
Female, age 94, left hemisphere
7.1
2830
Female, age 67, right hemisphere
3.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
35.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 35.3
Samples: 152
Max nTPM: 58.3
Min nTPM: 24.1
Std nTPM: 5.3
Median nTPM: 34.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
58.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
58.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
50.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
49.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
49.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
49.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
47.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
47.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
44.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
43.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
43.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
42.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
41.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
41.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
41.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
41.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
40.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
40.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
40.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
40.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
39.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
39.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
39.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
39.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
39.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
38.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
38.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
38.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
38.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
38.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
38.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
38.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
37.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
37.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
37.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
37.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
37.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
37.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
37.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
37.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
37.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
37.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
37.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
37.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
37.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
37.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
36.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
36.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
36.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
36.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
36.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
36.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
36.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
36.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
36.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
36.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
36.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
36.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
36.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
36.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
35.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
35.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
35.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
35.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
35.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
35.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
35.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
35.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
35.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
35.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
35.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
35.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
35.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
35.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
35.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
34.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
34.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
34.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
34.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
34.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
34.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
34.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
34.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
34.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
34.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
34.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
34.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
34.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
33.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
33.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
33.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
33.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
33.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
33.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
33.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
32.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
32.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
32.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
32.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
32.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
32.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
32.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
32.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
32.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
32.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
32.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
32.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
32.0
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
31.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
31.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
31.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
31.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
31.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
31.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
31.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
31.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
31.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
31.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
31.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
31.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
31.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
31.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
31.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
30.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
30.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
30.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
30.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
30.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
30.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
30.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
30.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
30.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
30.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
30.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
29.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
29.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
29.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
29.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
29.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
29.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
29.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
29.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
29.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
29.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
29.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
28.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
28.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
28.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
27.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
26.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
26.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
24.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
41.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 41.6
Samples: 4
Max nTPM: 42.1
Min nTPM: 40.4
Sample A
Male
42.1
Sample B
Male
41.8
Sample C
Female
42.1
Sample D
Female
40.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
