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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CLNS1A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
110.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
107.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
98.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
87.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
86.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
86.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
80.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
78.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
78.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
77.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
71.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
71.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
66.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
65.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
65.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
64.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
64.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
62.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
61.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
60.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
59.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
57.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
57.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
56.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
55.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
52.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
52.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
52.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
50.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
49.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
47.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
47.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
47.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
45.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
45.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
44.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
43.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
41.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
41.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
40.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
39.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
39.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
38.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
38.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
36.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
35.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
33.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
32.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
32.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
31.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
31.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
29.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
29.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
28.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
27.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
26.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
23.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
22.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
22.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
21.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
20.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
19.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
14.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CLNS1A is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
61.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
151.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
148.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
129.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
125.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
121.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
111.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
106.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
106.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
102.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
102.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
102.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
101.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
100.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
99.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
99.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
98.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
97.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
97.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
96.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
95.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
94.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
93.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
92.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
92.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
91.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
91.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
90.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
90.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
90.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
90.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
89.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
89.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
89.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
88.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
88.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
88.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
88.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
88.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
87.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
87.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
87.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
86.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
86.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
86.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
86.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
86.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
86.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
85.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
84.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
84.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
84.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
83.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
83.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
83.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
83.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
82.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
82.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
82.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
81.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
81.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
81.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
81.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
80.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
80.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
80.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
80.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
80.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
79.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
79.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
79.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
79.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
79.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
79.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
79.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
79.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
78.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
78.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
78.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
78.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
78.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
78.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
78.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
77.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
77.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
77.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
77.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
77.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
77.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
77.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
77.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
77.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
77.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
77.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
76.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
76.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
76.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
76.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
76.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
76.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
76.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
76.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
76.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
76.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
76.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
76.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
76.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
75.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
75.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
75.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
75.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
75.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
75.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
75.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
75.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
75.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
74.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
74.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
74.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
74.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
74.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
74.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
74.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
74.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
74.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
74.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
73.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
73.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
73.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
73.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
72.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
72.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
72.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
72.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
72.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
72.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
72.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
72.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
72.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
72.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
72.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
72.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
72.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
72.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
72.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
71.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
71.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
71.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
71.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
71.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
71.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
71.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
71.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
71.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
70.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
70.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
70.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
70.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
70.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
70.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
70.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
70.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
70.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
70.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
70.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
69.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
69.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
69.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
69.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
69.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
69.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
69.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
69.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
69.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
69.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
69.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
69.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
69.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
68.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
68.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
68.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
68.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
68.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
68.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
68.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
68.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
68.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
67.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
67.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
67.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
67.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
67.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
67.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
67.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
67.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
67.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
67.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
67.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
67.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
67.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
67.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
67.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
67.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
67.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
67.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
66.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
66.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
66.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
66.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
66.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
66.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
66.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
66.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
65.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
65.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
65.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
65.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
65.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
65.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
65.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
65.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
65.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
65.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
65.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
65.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
65.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
65.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
65.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
65.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
65.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
65.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
65.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
64.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
64.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
64.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
64.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
64.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
64.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
64.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
64.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
64.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
64.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
64.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
64.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
64.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
64.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
63.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
63.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
63.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
63.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
63.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
63.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
63.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
63.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
63.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
63.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
63.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
63.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
63.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
63.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
62.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
62.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
62.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
62.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
62.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
62.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
62.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
62.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
62.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
62.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
61.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
61.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
61.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
61.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
61.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
61.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
61.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
61.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
61.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
61.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
61.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
61.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
61.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
61.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
61.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
60.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
60.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
60.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
60.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
60.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
60.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
60.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
60.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
59.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
59.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
59.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
59.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
59.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
59.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
59.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
59.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
58.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
58.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
58.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
58.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
58.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
58.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
58.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
58.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
58.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
58.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
58.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
58.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
58.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
58.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
58.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
58.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
58.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
57.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
57.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
57.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
57.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
57.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
57.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
57.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
57.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
57.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
57.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
57.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
56.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
56.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
56.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
56.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
56.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
55.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
55.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
55.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
55.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
55.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
55.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
55.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
55.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
55.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
55.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
55.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
55.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
55.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
55.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
55.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
55.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
55.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
55.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
55.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
54.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
54.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
54.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
54.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
54.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
54.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
54.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
54.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
54.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
54.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
54.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
53.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
53.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
53.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
53.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
53.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
53.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
52.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
52.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
52.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
52.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
52.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
52.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
52.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
52.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
52.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
52.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
51.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
51.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
51.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
51.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
51.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
51.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
51.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
51.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
51.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
51.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
51.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
50.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
50.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
50.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
50.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
50.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
50.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
50.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
50.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
50.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
50.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
50.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
49.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
49.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
49.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
49.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
49.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
49.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
48.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
48.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
48.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
48.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
47.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
47.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
47.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
47.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
47.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
47.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
46.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
46.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
46.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
46.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
46.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
46.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
46.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
45.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
45.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
45.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
45.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
44.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
44.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
44.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
44.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
44.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
44.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
44.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
43.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
43.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
43.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
43.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
42.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
42.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
42.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
42.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
42.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
42.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
41.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
41.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
41.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
41.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
41.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
40.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
40.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
40.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
40.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
40.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
40.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
40.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
40.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
39.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
39.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
39.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
38.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
38.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
38.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
37.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
37.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
37.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
37.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
37.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
37.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
36.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
36.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
36.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
35.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
35.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
35.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
34.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
34.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
34.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
34.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
34.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
34.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
33.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
32.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
32.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
32.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
31.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
30.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
30.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
30.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
29.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
29.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
29.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
29.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
28.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
28.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
27.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
27.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
27.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
26.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
26.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
26.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
26.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
26.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
25.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
25.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
22.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
22.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
22.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
21.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
21.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
21.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
21.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
19.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
18.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
17.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
16.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
15.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
14.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
14.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CLNS1A is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
76.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
139.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
125.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
122.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
105.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
105.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
104.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
99.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
98.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
97.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
96.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
95.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
94.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
94.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
93.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
93.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
93.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
92.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
91.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
90.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
89.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
89.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
88.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
88.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
88.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
87.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
84.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
83.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
82.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
82.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
81.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
81.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
80.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
80.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
80.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
80.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
80.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
79.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
79.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
78.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
78.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
78.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
78.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
78.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
77.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
77.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
77.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
76.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
76.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
76.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
75.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
75.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
74.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
74.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
74.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
74.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
74.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
74.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
73.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
73.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
72.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
72.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
72.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
72.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
71.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
71.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
70.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
70.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
70.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
70.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
70.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
70.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
70.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
69.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
69.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
67.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
67.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
67.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
66.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
65.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
65.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
64.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
64.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
64.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
63.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
62.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
60.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
59.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
58.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
58.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
57.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
52.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
52.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
51.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
50.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
48.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
46.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
43.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
42.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
40.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CLNS1A is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
143.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
129.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
120.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
107.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
100.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
99.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
97.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
97.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
96.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
92.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
91.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
90.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
90.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
90.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
88.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
87.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
86.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
85.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
83.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
83.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
81.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
80.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
79.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
79.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
78.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
78.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
77.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
76.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
76.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
76.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
75.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
75.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
75.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
73.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
72.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
72.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
72.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
72.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
71.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
70.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
70.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
69.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
68.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
68.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
68.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
68.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
68.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
67.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
67.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
67.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
67.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
67.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
66.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
66.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
66.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
66.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
66.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
66.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
65.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
65.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
65.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
65.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
65.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
63.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
63.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
63.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
61.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
61.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
61.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
60.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
60.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
60.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
60.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
60.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
59.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
59.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
58.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
58.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
57.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
57.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
57.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
57.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
57.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
57.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
57.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
56.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
56.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
56.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
56.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
55.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
55.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
55.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
55.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
55.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
55.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
55.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
54.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
54.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
54.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
54.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
54.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
54.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
54.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
53.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
53.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
53.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
53.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
53.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
52.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
52.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
52.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
52.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
52.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
52.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
52.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
52.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
52.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
52.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
52.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
52.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
52.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
52.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
52.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
51.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
51.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
51.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
51.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
51.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
50.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
50.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
50.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
50.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
50.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
50.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
49.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
49.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
49.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
49.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
48.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
48.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
48.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
48.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
48.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
48.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
48.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
48.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
47.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
47.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
47.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
47.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
47.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
47.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
47.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
47.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
47.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
47.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
47.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
46.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
46.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
46.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
46.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
46.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
46.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
46.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
46.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
45.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
45.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
45.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
44.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
44.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
44.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
44.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
44.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
44.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
44.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
43.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
43.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
43.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
43.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
43.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
43.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
42.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
42.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
42.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
42.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
42.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
42.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
42.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
42.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
42.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
41.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
41.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
41.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
41.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
41.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
41.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
41.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
41.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
40.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
40.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
40.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
40.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
40.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
40.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
39.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
39.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
39.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
39.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
39.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
39.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
39.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
39.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
39.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
39.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
38.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
38.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
38.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
38.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
38.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
38.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
38.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
37.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
37.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
37.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
36.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
36.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
36.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
36.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
36.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
36.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
36.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
35.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
35.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
34.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
34.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
34.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
34.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
34.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
34.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
34.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
34.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
33.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
32.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
32.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
32.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
32.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
32.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
32.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
31.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
31.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
31.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
31.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
31.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
31.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
30.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
29.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
29.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
29.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
28.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
28.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
28.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
26.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
26.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
25.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
25.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
25.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
25.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
24.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
23.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
23.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
22.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
22.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
19.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
19.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
19.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
19.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
18.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
18.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
17.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
13.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
2.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
2.4
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.2
CPT0001340003
Tumor
0.9
CPT0078510003
Tumor
0.6
CPT0012180003
Tumor
0.6
CPT0015730003
Tumor
0.6
CPT0012900004
Tumor
0.6
CPT0092790003
Tumor
0.6
CPT0014160003
Tumor
0.5
CPT0012550003
Tumor
0.5
CPT0089460004
Tumor
0.5
CPT0064370003
Tumor
0.5
CPT0020120003
Tumor
0.5
CPT0065750003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0023350003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0078660003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0078930003
Tumor
0.4
CPT0006900003
Tumor
0.4
CPT0077310003
Tumor
0.4
CPT0025050003
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0086950003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0017410003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0001260009
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0092740003
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0086970003
Normal
0.0
CPT0012920003
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0078990003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0082010001
Normal
0.0
CPT0092190003
Normal
0.0
CPT0019160001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0065450001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0012370003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0069190001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0000640003
Tumor
-0.2
CPT0088920001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0063630003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0024680001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0079510001
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0084590001
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0075170001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0086830003
Normal
-0.3
CPT0012770003
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0000660001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0065820001
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0088630003
Tumor
-0.4
CPT0026420001
Normal
-0.4
CPT0006530001
Normal
-0.5
CPT0012570003
Normal
-0.5
CPT0013790003
Normal
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
