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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CLNS1A is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
176.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
148.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
143.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
138.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
131.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
126.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
125.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
124.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
121.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
111.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
111.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
110.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
110.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
107.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
107.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
106.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
105.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
104.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
104.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
103.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
99.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
99.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
99.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
99.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
97.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
96.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
95.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
94.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
94.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
93.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
93.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
92.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
91.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
90.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
90.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
89.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
89.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
89.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
88.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
88.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
88.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
87.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
87.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
87.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
87.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
87.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
86.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
85.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
84.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
83.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
83.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
83.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
82.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
82.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
82.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
81.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
81.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
81.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
80.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
80.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
79.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
79.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
79.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
79.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
78.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
78.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
77.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
76.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
76.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
76.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
76.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
76.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
76.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
75.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
74.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
74.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
74.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
74.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
73.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
73.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
72.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
72.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
72.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
72.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
71.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
71.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
71.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
70.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
70.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
70.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
69.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
69.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
69.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
68.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
67.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
67.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
67.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
67.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
66.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
66.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
65.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
65.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
65.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
65.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
65.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
65.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
65.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
65.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
65.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
64.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
64.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
64.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
63.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
63.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
63.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
62.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
62.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
62.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
62.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
62.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
62.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
62.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
62.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
62.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
61.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
61.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
61.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
60.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
59.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
59.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
59.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
59.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
59.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
59.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
59.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
59.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
59.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
58.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
58.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
58.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
58.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
58.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
58.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
58.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
58.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
58.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
58.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
58.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
58.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
57.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
57.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
57.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
57.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
57.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
57.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
56.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
56.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
56.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
56.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
56.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
55.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
55.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
55.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
55.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
55.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
55.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
55.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
54.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
54.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
54.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
54.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
54.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
54.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
54.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
53.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
53.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
53.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
53.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
53.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
53.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
52.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
52.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
52.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
52.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
52.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
52.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
52.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
52.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
52.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
52.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
52.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
51.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
51.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
51.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
51.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
51.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
51.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
51.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
51.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
51.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
51.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
51.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
50.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
50.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
50.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
50.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
50.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
49.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
49.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
49.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
48.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
48.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
48.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
48.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
48.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
48.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
47.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
47.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
47.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
47.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
47.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
46.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
46.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
46.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
46.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
46.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
46.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
46.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
45.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
45.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
45.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
44.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
44.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
44.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
44.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
44.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
44.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
43.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
43.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
43.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
43.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
43.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
43.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
43.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
43.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
42.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
42.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
42.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
42.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
42.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
42.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
42.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
42.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
42.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
41.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
41.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
41.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
41.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
41.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
41.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
41.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
40.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
40.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
40.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
40.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
40.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
40.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
39.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
39.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
39.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
38.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
38.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
38.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
38.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
38.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
38.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
38.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
38.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
38.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
38.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
37.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
37.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
37.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
37.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
37.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
37.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
36.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
36.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
36.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
36.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
35.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
35.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
35.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
35.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
35.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
34.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
34.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
34.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
34.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
34.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
34.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
34.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
34.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
34.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
33.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
33.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
33.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
33.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
33.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
33.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
33.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
33.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
33.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
33.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
32.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
32.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
32.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
32.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
32.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
31.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
31.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
31.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
31.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
31.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
31.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
31.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
30.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
30.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
30.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
30.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
29.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
29.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
29.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
28.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
28.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
28.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
27.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
27.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
27.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
27.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
27.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
26.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
25.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
25.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
25.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
23.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
23.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
23.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
23.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
22.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
21.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
21.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
20.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
19.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
19.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
19.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
19.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
17.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
15.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
13.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
11.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CLNS1A is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.5
Number of samples
231
Samples
Sample
Description
TPM
DO45211
0 years, male, NA, stage:3, alive, 240 days
160.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
160.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
132.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
126.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
117.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
109.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
101.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
99.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
99.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
92.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
92.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
91.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
91.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
90.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
89.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
89.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
87.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
87.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
85.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
84.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
81.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
81.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
81.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
80.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
78.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
77.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
77.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
77.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
76.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
75.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
74.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
74.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
72.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
71.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
71.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
70.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
69.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
69.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
68.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
67.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
67.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
66.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
65.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
65.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
64.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
64.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
64.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
63.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
63.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
62.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
62.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
62.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
62.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
61.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
61.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
60.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
60.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
60.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
60.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
60.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
59.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
59.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
59.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
59.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
58.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
58.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
58.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
58.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
58.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
58.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
57.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
57.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
57.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
57.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
56.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
56.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
55.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
55.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
55.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
54.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
54.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
54.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
54.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
54.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
54.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
53.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
53.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
53.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
53.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
52.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
52.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
52.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
52.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
52.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
51.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
51.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
51.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
51.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
51.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
51.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
50.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
50.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
50.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
50.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
50.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
49.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
49.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
49.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
49.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
49.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
48.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
48.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
48.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
48.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
48.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
48.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
48.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
47.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
47.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
47.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
47.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
46.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
45.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
45.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
45.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
45.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
45.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
44.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
44.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
43.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
43.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
43.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
43.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
43.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
43.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
42.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
42.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
42.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
42.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
42.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
42.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
42.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
41.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
41.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
41.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
40.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
40.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
40.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
40.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
39.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
39.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
38.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
38.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
38.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
38.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
38.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
38.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
37.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
37.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
37.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
37.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
37.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
37.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
37.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
37.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
37.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
37.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
36.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
36.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
36.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
36.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
36.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
36.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
36.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
36.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
36.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
36.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
36.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
35.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
35.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
35.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
35.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
35.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
34.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
34.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
33.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
33.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
33.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
33.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
32.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
32.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
32.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
32.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
32.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
32.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
31.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
31.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
31.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
31.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
31.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
30.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
30.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
30.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
30.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
30.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
29.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
29.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
29.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
29.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
28.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
28.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
28.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
28.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
28.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
28.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
27.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
27.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
25.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
25.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
25.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
23.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
23.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
22.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
22.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
21.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
21.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
19.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
19.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
19.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
19.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
11.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
113
Tumor
0.8
391
Tumor
0.7
817
Tumor
0.7
745
Tumor
0.6
513
Tumor
0.6
983
Tumor
0.5
1032
Normal
0.5
723
Tumor
0.5
314
Normal
0.5
332
Normal
0.5
967
Tumor
0.5
557
Tumor
0.5
473
Tumor
0.5
741
Tumor
0.5
463
Tumor
0.5
467
Tumor
0.5
278
Normal
0.5
395
Tumor
0.4
387
Tumor
0.4
981
Tumor
0.4
1021
Tumor
0.4
342
Normal
0.4
393
Tumor
0.4
525
Tumor
0.4
661
Tumor
0.4
877
Tumor
0.4
616
Normal
0.4
368
Normal
0.4
277
Tumor
0.4
186
Normal
0.4
285
Tumor
0.4
358
Normal
0.4
742
Normal
0.4
361
Tumor
0.3
696
Normal
0.3
443
Tumor
0.3
384
Normal
0.3
642
Normal
0.3
526
Normal
0.3
1022
Normal
0.3
456
Normal
0.3
666
Normal
0.3
195
Tumor
0.3
1015
Tumor
0.3
413
Tumor
0.3
452
Normal
0.3
353
Tumor
0.3
283
Tumor
0.3
217
Tumor
0.3
1013
Tumor
0.3
1026
Normal
0.3
432
Normal
0.3
865
Tumor
0.3
925
Tumor
0.3
728
Normal
0.3
223
Tumor
0.3
464
Normal
0.3
313
Tumor
0.3
435
Tumor
0.3
468
Normal
0.3
367
Tumor
0.3
863
Tumor
0.3
618
Normal
0.3
648
Normal
0.3
172
Normal
0.3
466
Normal
0.3
671
Tumor
0.3
567
Tumor
0.3
721
Tumor
0.3
873
Tumor
0.3
573
Tumor
0.3
258
Normal
0.3
375
Tumor
0.3
385
Tumor
0.3
162
Normal
0.3
331
Tumor
0.2
862
Normal
0.2
628
Normal
0.2
148
Normal
0.2
672
Normal
0.2
665
Tumor
0.2
465
Tumor
0.2
446
Normal
0.2
514
Normal
0.2
356
Normal
0.2
311
Tumor
0.2
376
Normal
0.2
298
Normal
0.2
365
Tumor
0.2
737
Tumor
0.2
426
Normal
0.2
125
Tumor
0.2
394
Normal
0.2
517
Tumor
0.2
147
Tumor
0.2
327
Tumor
0.2
482
Normal
0.2
424
Normal
0.2
354
Normal
0.2
615
Tumor
0.2
858
Normal
0.2
257
Tumor
0.2
518
Normal
0.2
662
Normal
0.2
686
Normal
0.2
366
Normal
0.2
444
Normal
0.2
714
Normal
0.2
926
Normal
0.2
738
Normal
0.2
916
Normal
0.2
228
Normal
0.2
488
Normal
0.2
851
Tumor
0.2
663
Tumor
0.2
756
Normal
0.2
422
Normal
0.2
494
Normal
0.2
636
Normal
0.2
297
Tumor
0.2
978
Normal
0.2
713
Tumor
0.2
478
Normal
0.2
944
Normal
0.2
483
Tumor
0.2
436
Normal
0.2
498
Normal
0.2
864
Normal
0.2
428
Normal
0.2
1042
Normal
0.2
664
Normal
0.2
955
Tumor
0.1
364
Normal
0.1
866
Normal
0.1
434
Normal
0.1
568
Normal
0.1
433
Tumor
0.1
852
Normal
0.1
685
Tumor
0.1
716
Normal
0.1
414
Normal
0.1
912
Normal
0.1
396
Normal
0.1
352
Normal
0.1
262
Normal
0.1
824
Normal
0.1
1044
Normal
0.1
328
Normal
0.1
161
Tumor
0.1
462
Normal
0.1
218
Normal
0.1
524
Normal
0.1
145
Tumor
0.1
528
Normal
0.1
388
Normal
0.1
472
Normal
0.1
268
Normal
0.1
965
Tumor
0.1
484
Normal
0.1
344
Normal
0.1
722
Normal
0.1
412
Normal
0.1
451
Tumor
0.1
918
Normal
0.1
563
Tumor
0.1
286
Normal
0.1
416
Normal
0.1
874
Normal
0.1
746
Normal
0.1
312
Normal
0.1
1046
Normal
0.1
536
Normal
0.1
392
Normal
0.1
938
Normal
0.1
222
Normal
0.1
114
Normal
0.1
357
Tumor
0.1
272
Normal
0.1
362
Normal
0.1
196
Normal
0.1
1014
Normal
0.1
523
Tumor
0.1
213
Tumor
0.1
497
Tumor
0.1
574
Normal
0.1
786
Normal
0.1
647
Tumor
0.1
481
Tumor
0.1
111
Normal
0.1
445
Tumor
0.1
937
Tumor
0.1
1043
Tumor
0.1
534
Normal
0.1
627
Tumor
0.1
126
Normal
0.1
224
Normal
0.1
124
Normal
0.1
917
Tumor
0.1
212
Normal
0.1
421
Tumor
0.1
914
Normal
0.1
923
Tumor
0.1
814
Normal
0.1
516
Normal
0.1
284
Normal
0.0
816
Normal
0.0
698
Normal
0.0
951
Tumor
0.0
214
Normal
0.0
474
Normal
0.0
952
Normal
0.0
571
Tumor
0.0
924
Normal
0.0
635
Tumor
0.0
191
Tumor
0.0
386
Normal
0.0
913
Tumor
0.0
425
Tumor
0.0
868
Normal
0.0
1028
Normal
0.0
778
Normal
0.0
132
Normal
0.0
922
Normal
0.0
493
Tumor
0.0
964
Normal
0.0
884
Normal
0.0
135
Tumor
0.0
461
Tumor
0.0
956
Normal
0.0
455
Tumor
0.0
558
Normal
0.0
1016
Normal
0.0
968
Normal
0.0
185
Tumor
0.0
341
Tumor
0.0
881
Tumor
0.0
1031
Tumor
0.0
188
Normal
0.0
857
Tumor
0.0
755
Tumor
0.0
515
Tumor
0.0
492
Normal
0.0
1041
Tumor
0.0
136
Normal
0.0
943
Tumor
0.0
984
Normal
0.0
882
Normal
0.0
818
Normal
0.0
966
Normal
0.0
138
Normal
0.0
954
Normal
0.0
192
Normal
0.0
546
Normal
0.0
343
Tumor
0.0
491
Tumor
0.0
975
Tumor
0.0
976
Normal
0.0
128
Normal
0.0
641
Tumor
0.0
142
Normal
0.0
232
Normal
0.0
411
Tumor
0.0
724
Normal
0.0
363
Tumor
0.0
221
Tumor
0.0
112
Tumor
-0.1
146
Normal
-0.1
137
Tumor
-0.1
131
Tumor
-0.1
727
Tumor
-0.1
127
Tumor
-0.1
448
Normal
-0.1
1025
Tumor
-0.1
867
Tumor
-0.1
958
Normal
-0.1
267
Tumor
-0.1
744
Normal
-0.1
227
Tumor
-0.1
777
Tumor
-0.1
572
Normal
-0.1
715
Tumor
-0.1
537
Tumor
-0.1
487
Tumor
-0.1
415
Tumor
-0.1
785
Tumor
-0.1
823
Tumor
-0.1
743
Tumor
-0.1
187
Tumor
-0.1
211
Tumor
-0.1
878
Normal
-0.1
535
Tumor
-0.1
231
Tumor
-0.1
471
Tumor
-0.1
423
Tumor
-0.1
564
Normal
-0.1
953
Tumor
-0.1
815
Tumor
-0.1
695
Tumor
-0.1
813
Tumor
-0.1
383
Tumor
-0.2
1027
Tumor
-0.2
921
Tumor
-0.2
351
Tumor
-0.2
538
Normal
-0.2
431
Tumor
-0.2
355
Tumor
-0.2
545
Tumor
-0.2
477
Tumor
-0.2
982
Normal
-0.2
861
Tumor
-0.2
883
Tumor
-0.2
533
Tumor
-0.2
554
Normal
-0.2
617
Tumor
-0.2
915
Tumor
-0.2
271
Tumor
-0.2
123
Tumor
-0.2
553
Tumor
-0.2
427
Tumor
-0.2
447
Tumor
-0.2
141
Tumor
-0.2
963
Tumor
-0.3
957
Tumor
-0.3
1045
Tumor
-0.3
977
Tumor
-0.3
527
Tumor
-0.3
171
Tumor
-0.4
911
Tumor
-0.4
697
Tumor
-0.5
261
Tumor
-0.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
