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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NOTCH3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
68.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
51.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
44.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
41.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
36.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
35.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
30.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
28.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
27.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
24.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
23.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
20.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
19.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
19.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
18.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
18.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
17.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
17.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
17.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
17.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
15.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
15.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
15.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
14.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
14.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
13.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
13.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
12.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
11.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
11.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
11.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
10.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
10.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
10.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
10.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
9.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
9.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
9.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
8.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
8.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
8.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
8.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
7.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
7.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
7.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
6.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
5.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
5.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
4.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
4.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
2.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
2.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NOTCH3 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
55.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
214.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
198.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
197.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
191.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
191.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
188.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
186.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
184.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
181.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
180.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
176.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
175.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
167.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
164.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
161.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
160.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
152.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
142.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
138.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
137.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
136.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
135.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
133.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
132.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
132.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
132.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
131.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
130.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
129.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
129.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
128.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
127.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
126.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
125.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
125.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
124.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
122.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
122.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
120.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
119.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
115.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
115.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
114.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
114.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
111.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
110.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
109.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
109.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
108.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
107.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
107.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
106.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
105.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
105.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
105.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
103.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
103.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
103.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
103.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
102.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
102.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
102.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
102.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
101.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
100.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
100.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
99.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
99.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
99.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
99.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
98.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
98.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
98.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
98.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
98.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
97.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
97.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
96.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
96.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
96.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
96.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
95.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
95.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
95.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
94.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
94.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
93.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
92.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
89.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
89.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
88.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
88.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
88.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
87.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
87.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
87.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
86.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
85.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
85.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
85.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
84.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
84.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
84.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
84.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
82.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
82.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
81.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
80.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
79.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
79.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
79.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
79.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
78.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
78.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
77.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
77.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
76.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
76.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
76.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
76.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
75.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
75.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
75.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
74.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
74.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
74.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
74.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
74.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
74.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
73.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
73.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
73.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
73.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
72.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
72.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
72.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
72.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
72.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
71.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
71.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
71.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
71.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
71.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
71.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
70.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
70.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
70.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
70.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
70.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
70.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
70.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
69.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
69.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
69.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
68.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
67.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
67.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
67.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
67.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
67.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
67.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
66.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
66.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
66.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
66.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
65.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
65.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
64.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
64.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
64.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
64.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
63.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
63.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
63.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
63.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
63.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
63.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
62.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
62.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
62.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
62.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
62.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
62.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
62.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
61.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
61.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
60.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
60.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
60.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
60.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
60.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
60.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
60.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
59.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
59.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
59.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
59.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
59.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
59.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
59.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
59.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
59.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
58.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
58.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
58.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
58.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
58.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
58.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
57.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
57.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
57.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
57.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
57.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
56.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
56.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
56.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
56.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
56.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
55.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
55.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
55.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
54.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
54.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
54.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
54.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
54.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
54.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
54.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
54.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
53.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
53.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
53.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
53.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
53.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
53.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
53.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
53.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
52.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
52.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
52.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
51.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
51.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
50.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
50.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
50.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
50.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
50.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
49.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
49.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
49.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
49.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
48.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
48.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
48.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
48.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
48.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
48.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
47.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
47.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
47.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
47.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
47.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
46.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
46.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
46.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
46.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
46.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
46.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
46.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
46.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
45.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
45.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
45.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
45.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
44.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
44.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
44.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
44.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
44.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
44.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
43.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
43.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
43.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
43.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
43.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
43.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
42.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
42.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
42.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
42.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
42.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
41.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
41.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
41.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
41.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
41.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
41.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
40.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
40.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
40.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
40.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
40.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
40.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
40.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
39.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
39.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
39.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
39.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
38.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
38.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
38.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
38.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
37.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
37.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
37.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
37.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
37.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
36.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
36.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
36.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
36.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
36.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
35.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
35.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
35.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
35.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
35.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
35.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
35.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
35.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
35.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
34.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
34.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
34.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
34.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
34.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
34.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
34.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
33.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
33.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
33.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
33.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
33.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
33.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
32.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
32.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
32.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
31.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
31.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
31.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
31.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
31.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
30.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
30.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
30.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
30.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
30.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
30.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
30.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
30.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
30.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
30.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
29.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
29.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
29.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
29.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
29.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
29.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
29.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
29.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
28.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
28.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
28.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
27.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
27.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
27.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
27.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
26.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
26.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
26.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
26.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
25.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
25.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
25.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
25.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
25.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
25.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
25.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
25.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
25.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
24.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
24.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
24.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
24.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
24.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
24.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
23.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
23.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
23.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
23.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
23.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
23.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
23.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
23.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
23.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
23.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
23.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
23.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
22.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
22.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
22.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
22.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
22.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
21.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
21.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
21.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
21.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
21.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
21.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
21.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
20.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
20.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
20.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
20.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
20.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
20.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
20.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
20.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
20.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
19.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
19.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
19.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
19.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
19.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
18.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
18.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
18.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
18.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
18.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
17.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
17.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
17.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
17.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
17.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
17.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
16.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
16.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
16.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
16.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
16.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
16.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
16.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
15.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
15.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
15.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
14.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
14.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
14.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
13.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
13.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
13.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
13.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
13.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
13.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
12.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
12.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
12.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
12.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
12.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
11.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
11.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
11.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
11.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
11.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
10.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
10.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
10.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
9.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
9.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
8.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
8.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
8.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
8.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
7.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
7.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
7.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
6.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
6.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
5.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
5.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
5.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
4.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
4.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
4.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
4.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
3.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
3.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
3.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
3.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
2.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
2.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
1.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NOTCH3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
162.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
146.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
120.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
116.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
89.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
83.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
81.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
79.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
73.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
69.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
69.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
66.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
61.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
61.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
60.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
60.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
57.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
57.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
53.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
53.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
51.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
51.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
49.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
48.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
48.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
46.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
46.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
44.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
44.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
43.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
42.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
40.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
40.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
39.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
39.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
37.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
37.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
36.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
36.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
36.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
35.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
32.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
32.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
32.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
31.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
31.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
30.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
30.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
30.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
29.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
29.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
29.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
29.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
28.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
28.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
28.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
25.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
25.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
24.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
23.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
22.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
22.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
21.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
20.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
20.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
17.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
16.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
16.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
15.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
15.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
15.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
14.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
13.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
12.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
11.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
11.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
10.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
9.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
9.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
8.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
7.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
7.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
7.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
6.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
6.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
5.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
4.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
3.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
2.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
1.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
1.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
1.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
0.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NOTCH3 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
436.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
139.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
108.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
93.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
68.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
67.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
62.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
57.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
52.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
49.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
47.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
46.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
44.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
39.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
39.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
34.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
30.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
27.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
25.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
24.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
23.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
22.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
21.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
20.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
20.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
20.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
19.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
19.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
19.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
17.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
17.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
17.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
17.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
17.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
17.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
17.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
16.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
15.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
15.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
15.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
15.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
14.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
14.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
14.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
13.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
13.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
13.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
13.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
12.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
12.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
12.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
12.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
11.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
11.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
11.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
10.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
10.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
10.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
10.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
10.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
9.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
9.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
9.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
9.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
8.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
8.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
8.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
8.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
8.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
8.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
7.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
7.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
7.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
7.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
6.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
6.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
6.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
6.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
6.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
6.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
6.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
5.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
5.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
5.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
5.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
5.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
5.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
5.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
5.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
4.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
4.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
4.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
4.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
4.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
4.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
4.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
4.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
4.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
4.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
4.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
4.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
4.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
4.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
4.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
4.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
4.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
4.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
4.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
4.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
4.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
3.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
3.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
3.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
3.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
3.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
3.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
3.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
3.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
3.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
3.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
3.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
3.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
3.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
3.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
3.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
3.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
3.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
3.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
3.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
3.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
3.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
3.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
3.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
3.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
2.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
2.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
2.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
2.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
2.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
2.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
2.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
2.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
2.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
2.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
2.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
2.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
2.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
2.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
2.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
2.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
2.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
2.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
2.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
2.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
2.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
2.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
2.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
2.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
2.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
2.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
2.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
2.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
2.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
2.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
2.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
2.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
2.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
2.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
2.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
2.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
2.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
2.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
2.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
2.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
1.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
1.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
1.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
1.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
1.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
1.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
1.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
1.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
1.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
1.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
1.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
1.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
1.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
1.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
1.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
1.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
1.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
1.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
1.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
1.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
1.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
1.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
1.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
1.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
1.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
1.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
1.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
1.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
1.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
1.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
1.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
1.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
1.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
1.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
1.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
1.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
1.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
1.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
1.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
1.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
1.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
1.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
1.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
1.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
1.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
0.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
0.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
0.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
0.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
0.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
0.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
0.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
0.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
0.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
0.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
0.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
0.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
0.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
0.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
0.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011240003
Tumor
1.9
CPT0084560003
Tumor
1.6
CPT0001340003
Tumor
1.2
CPT0012080003
Tumor
1.1
CPT0088630003
Tumor
1.0
CPT0066480003
Tumor
0.9
CPT0001260009
Tumor
0.9
CPT0085670003
Tumor
0.9
CPT0015910003
Tumor
0.9
CPT0075720003
Tumor
0.9
CPT0065870003
Tumor
0.9
CPT0077490003
Tumor
0.9
CPT0012670003
Tumor
0.8
CPT0081600003
Tumor
0.8
CPT0086870003
Tumor
0.8
CPT0001270001
Normal
0.8
CPT0088690003
Tumor
0.7
CPT0010120001
Normal
0.6
CPT0000640003
Tumor
0.6
CPT0069000003
Tumor
0.6
CPT0092730003
Tumor
0.6
CPT0088760003
Tumor
0.6
CPT0088900003
Tumor
0.6
CPT0017850003
Tumor
0.6
CPT0025230003
Tumor
0.6
CPT0075130003
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0092190003
Normal
0.5
CPT0079230003
Tumor
0.5
CPT0075560003
Tumor
0.5
CPT0010160003
Tumor
0.5
CPT0063630003
Tumor
0.5
CPT0025880003
Tumor
0.5
CPT0079270003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0084590001
Normal
0.4
CPT0017410003
Tumor
0.4
CPT0025350003
Tumor
0.4
CPT0069190001
Normal
0.4
CPT0077110003
Tumor
0.4
CPT0000780007
Tumor
0.4
CPT0012640003
Normal
0.4
CPT0079480003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0019130003
Tumor
0.4
CPT0014370004
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0012920003
Normal
0.3
CPT0079510001
Normal
0.3
CPT0092790003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0020130001
Normal
0.3
CPT0079410003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0025110003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0024680001
Normal
0.2
CPT0000660001
Normal
0.2
CPT0012290003
Normal
0.1
CPT0001190001
Normal
0.1
CPT0088500001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0063640001
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0025920001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0001180009
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0000790001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0006950001
Normal
-0.2
CPT0026410003
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0026420001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0086950003
Tumor
-0.2
CPT0077500001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0006900003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0077140001
Normal
-0.3
CPT0079380003
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0086370003
Normal
-0.3
CPT0025170003
Tumor
-0.3
CPT0001350001
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0078930003
Tumor
-0.3
CPT0001540009
Tumor
-0.3
CPT0023710001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0078660003
Tumor
-0.3
CPT0066430001
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0079000001
Normal
-0.4
CPT0088780001
Normal
-0.4
CPT0012900004
Tumor
-0.4
CPT0025050003
Tumor
-0.4
CPT0086360003
Tumor
-0.5
CPT0081880003
Tumor
-0.5
CPT0064370003
Tumor
-0.5
CPT0023350003
Tumor
-0.5
CPT0023690003
Tumor
-0.6
CPT0020120003
Tumor
-0.6
CPT0077310003
Tumor
-0.6
CPT0014160003
Tumor
-0.6
CPT0025290003
Tumor
-0.6
CPT0076330003
Tumor
-0.7
CPT0014450004
Tumor
-0.7
CPT0065750003
Tumor
-0.7
CPT0006630003
Tumor
-0.7
CPT0019990003
Tumor
-0.7
CPT0012550003
Tumor
-0.8
CPT0088970003
Tumor
-0.8
CPT0011410003
Tumor
-0.9
CPT0002270011
Tumor
-0.9
CPT0065810003
Tumor
-0.9
CPT0092290003
Tumor
-1.0
CPT0079180003
Tumor
-1.0
CPT0066470004
Tumor
-1.0
CPT0001500009
Tumor
-1.0
CPT0078510003
Tumor
-1.1
CPT0015730003
Tumor
-1.3
CPT0007860003
Tumor
-1.3
CPT0024670003
Tumor
-1.4
CPT0012180003
Tumor
-1.4
CPT0078800003
Tumor
-1.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
