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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
XRCC1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
45.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
43.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
40.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
39.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
39.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
37.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
34.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
34.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
32.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
30.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
29.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
28.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
27.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
27.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
25.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
25.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
24.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
23.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
22.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
22.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
21.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
21.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
21.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
20.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
18.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
18.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
18.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
18.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
18.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
17.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
16.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
16.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
15.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
15.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
15.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
15.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
15.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
15.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
14.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
14.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
14.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
14.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
13.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
13.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
13.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
13.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
13.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
12.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
11.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
11.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
11.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
11.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
10.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
10.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
10.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
9.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
8.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
8.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
8.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
7.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
XRCC1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
50.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
46.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
41.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
40.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
40.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
38.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
38.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
37.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
37.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
36.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
36.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
36.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
36.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
36.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
35.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
35.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
35.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
35.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
34.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
34.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
34.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
34.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
34.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
34.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
34.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
33.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
33.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
33.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
32.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
32.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
32.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
32.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
32.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
32.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
32.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
32.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
32.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
32.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
32.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
31.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
31.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
31.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
31.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
31.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
30.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
30.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
30.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
30.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
30.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
30.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
30.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
30.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
30.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
29.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
29.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
29.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
29.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
29.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
29.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
29.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
29.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
29.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
29.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
29.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
29.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
29.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
29.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
28.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
28.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
28.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
28.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
28.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
28.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
28.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
28.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
28.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
28.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
28.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
28.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
28.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
28.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
28.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
28.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
28.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
28.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
28.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
28.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
27.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
27.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
27.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
27.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
27.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
27.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
27.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
27.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
27.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
27.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
27.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
27.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
27.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
27.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
27.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
27.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
27.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
27.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
27.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
27.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
27.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
27.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
27.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
27.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
27.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
27.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
26.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
26.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
26.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
26.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
26.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
26.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
26.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
26.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
26.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
26.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
26.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
26.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
26.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
26.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
26.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
26.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
26.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
26.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
26.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
26.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
26.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
26.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
26.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
26.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
26.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
26.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
26.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
26.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
26.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
26.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
26.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
26.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
25.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
25.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
25.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
25.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
25.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
25.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
25.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
25.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
25.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
25.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
25.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
25.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
25.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
25.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
25.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
25.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
25.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
25.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
25.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
25.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
25.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
25.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
25.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
25.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
25.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
25.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
25.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
25.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
24.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
24.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
24.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
24.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
24.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
24.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
24.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
24.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
24.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
24.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
24.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
24.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
24.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
24.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
24.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
24.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
24.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
24.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
24.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
24.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
24.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
24.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
24.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
24.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
24.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
24.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
24.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
23.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
23.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
23.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
23.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
23.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
23.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
23.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
23.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
23.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
23.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
23.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
23.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
23.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
23.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
23.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
23.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
23.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
23.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
23.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
23.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
23.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
23.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
23.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
23.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
23.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
23.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
23.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
23.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
22.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
22.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
22.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
22.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
22.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
22.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
22.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
22.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
22.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
22.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
22.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
22.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
22.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
22.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
22.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
22.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
22.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
22.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
22.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
22.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
22.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
22.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
22.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
22.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
22.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
22.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
22.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
22.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
22.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
22.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
21.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
21.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
21.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
21.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
21.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
21.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
21.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
21.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
21.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
21.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
21.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
21.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
21.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
21.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
21.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
21.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
21.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
21.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
21.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
21.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
21.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
21.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
21.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
21.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
21.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
21.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
21.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
20.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
20.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
20.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
20.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
20.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
20.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
20.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
20.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
20.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
20.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
20.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
20.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
20.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
20.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
20.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
20.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
20.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
20.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
20.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
20.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
20.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
20.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
20.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
20.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
20.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
20.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
20.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
20.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
20.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
20.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
20.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
19.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
19.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
19.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
19.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
19.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
19.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
19.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
19.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
19.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
19.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
19.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
19.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
19.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
19.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
19.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
19.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
19.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
19.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
19.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
19.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
19.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
19.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
19.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
19.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
19.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
19.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
19.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
19.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
19.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
19.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
19.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
19.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
19.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
19.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
19.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
18.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
18.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
18.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
18.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
18.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
18.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
18.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
18.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
18.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
18.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
18.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
18.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
18.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
18.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
18.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
18.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
18.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
18.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
18.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
18.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
18.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
18.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
18.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
18.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
18.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
18.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
17.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
17.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
17.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
17.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
17.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
17.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
17.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
17.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
17.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
17.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
17.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
17.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
17.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
17.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
17.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
17.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
17.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
17.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
17.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
16.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
16.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
16.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
16.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
16.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
16.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
16.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
16.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
16.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
16.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
16.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
16.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
16.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
16.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
16.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
16.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
16.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
16.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
16.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
16.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
16.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
16.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
15.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
15.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
15.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
15.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
15.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
15.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
15.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
15.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
15.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
15.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
15.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
15.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
15.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
15.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
15.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
14.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
14.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
14.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
14.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
14.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
14.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
14.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
14.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
14.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
14.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
14.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
14.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
14.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
14.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
14.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
13.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
13.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
13.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
13.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
13.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
12.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
12.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
12.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
12.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
12.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
12.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
12.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
12.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
12.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
12.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
11.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
11.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
11.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
11.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
10.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
10.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
9.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
8.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
7.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
4.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
XRCC1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
50.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
37.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
34.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
32.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
32.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
31.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
30.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
30.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
30.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
28.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
28.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
28.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
28.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
28.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
28.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
28.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
28.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
27.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
27.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
27.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
27.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
27.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
27.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
27.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
26.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
26.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
26.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
26.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
25.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
25.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
25.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
24.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
24.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
24.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
24.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
24.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
24.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
24.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
24.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
23.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
23.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
23.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
23.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
23.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
23.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
23.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
23.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
22.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
22.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
22.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
22.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
22.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
22.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
21.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
21.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
21.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
21.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
21.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
21.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
21.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
20.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
20.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
20.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
20.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
19.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
19.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
19.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
19.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
19.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
18.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
18.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
18.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
17.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
17.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
17.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
17.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
17.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
16.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
16.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
15.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
15.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
15.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
15.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
14.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
14.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
14.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
12.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
12.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
11.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
XRCC1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
74.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
73.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
66.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
66.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
65.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
62.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
59.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
56.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
55.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
54.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
50.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
49.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
49.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
49.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
47.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
46.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
46.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
46.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
45.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
45.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
44.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
43.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
42.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
42.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
42.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
42.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
41.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
40.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
40.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
40.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
40.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
40.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
39.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
39.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
39.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
38.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
38.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
38.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
37.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
37.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
36.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
36.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
36.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
36.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
35.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
35.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
35.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
35.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
35.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
35.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
35.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
34.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
34.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
33.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
33.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
33.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
33.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
33.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
32.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
32.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
31.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
31.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
31.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
31.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
30.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
30.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
30.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
30.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
30.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
30.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
30.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
30.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
30.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
29.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
29.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
29.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
29.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
29.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
29.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
28.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
28.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
28.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
28.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
28.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
28.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
28.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
28.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
28.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
27.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
27.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
27.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
27.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
27.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
27.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
27.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
27.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
27.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
27.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
27.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
27.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
27.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
27.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
27.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
26.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
26.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
26.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
26.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
26.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
26.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
26.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
26.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
26.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
26.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
26.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
25.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
25.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
25.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
25.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
25.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
25.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
25.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
25.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
25.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
25.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
25.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
25.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
25.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
25.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
25.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
24.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
24.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
24.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
24.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
24.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
24.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
24.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
24.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
24.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
24.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
24.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
24.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
24.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
24.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
24.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
24.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
24.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
23.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
23.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
23.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
23.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
23.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
23.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
23.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
23.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
23.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
23.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
23.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
23.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
23.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
22.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
22.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
22.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
22.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
22.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
22.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
22.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
22.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
22.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
22.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
22.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
21.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
21.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
21.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
21.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
21.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
21.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
21.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
21.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
21.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
20.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
20.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
20.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
20.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
20.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
20.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
20.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
20.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
20.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
20.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
20.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
20.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
20.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
20.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
19.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
19.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
19.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
19.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
19.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
19.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
19.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
19.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
19.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
19.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
19.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
19.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
19.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
18.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
18.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
18.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
18.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
18.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
18.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
18.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
18.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
18.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
17.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
17.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
17.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
17.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
17.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
17.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
17.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
17.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
17.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
17.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
17.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
17.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
17.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
16.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
16.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
16.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
16.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
16.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
16.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
16.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
16.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
16.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
16.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
16.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
16.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
15.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
15.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
15.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
15.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
15.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
15.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
15.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
15.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
14.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
14.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
14.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
14.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
13.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
13.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
13.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
13.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
13.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
12.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
12.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
12.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
11.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
10.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
9.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
9.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012180003
Tumor
0.6
CPT0009060003
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0012640003
Normal
0.5
CPT0014370004
Tumor
0.5
CPT0086950003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0007870001
Normal
0.4
CPT0026410003
Tumor
0.4
CPT0092190003
Normal
0.3
CPT0006440003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0079300001
Normal
0.3
CPT0088970003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0001230001
Normal
0.3
CPT0012550003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0000780007
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0001510001
Normal
0.2
CPT0079510001
Normal
0.2
CPT0078990003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0077110003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0088900003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0019160001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0001260009
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0006900003
Tumor
0.2
CPT0079000001
Normal
0.2
CPT0011240003
Tumor
0.2
CPT0088500001
Normal
0.2
CPT0088550004
Tumor
0.2
CPT0006730001
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0084590001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0069010001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0066470004
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0026420001
Normal
0.1
CPT0023350003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0065810003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0078940001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0084560003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0006950001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0077140001
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0066430001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0078670001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0001340003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0007470001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0066480003
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0012670003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0002270011
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0064370003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0079180003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0081880003
Tumor
-0.1
CPT0078660003
Tumor
-0.1
CPT0012090003
Normal
-0.2
CPT0076330003
Tumor
-0.2
CPT0082010001
Normal
-0.2
CPT0079270003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0007320003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0025110003
Tumor
-0.2
CPT0001350001
Normal
-0.3
CPT0078510003
Tumor
-0.3
CPT0011410003
Tumor
-0.4
CPT0007860003
Tumor
-0.4
CPT0010170001
Normal
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
