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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SREBF1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
112.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
110.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
99.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
99.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
99.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
96.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
90.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
85.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
83.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
80.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
67.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
61.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
60.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
57.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
56.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
55.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
55.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
52.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
52.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
52.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
52.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
50.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
48.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
48.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
47.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
47.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
47.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
47.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
45.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
43.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
43.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
42.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
38.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
37.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
35.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
31.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
30.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
30.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
30.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
30.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
28.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
28.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
26.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
25.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
25.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
24.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
22.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
20.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
19.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
18.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
17.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
16.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
15.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
15.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
14.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
12.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
12.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
11.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
8.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
7.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SREBF1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
147.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
107.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
105.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
83.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
81.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
80.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
77.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
75.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
70.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
68.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
64.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
54.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
54.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
52.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
49.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
48.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
47.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
45.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
44.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
44.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
44.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
44.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
42.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
42.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
42.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
42.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
42.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
41.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
41.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
41.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
40.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
39.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
39.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
39.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
39.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
38.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
38.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
37.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
37.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
36.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
36.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
36.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
36.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
35.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
35.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
35.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
34.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
34.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
34.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
33.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
33.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
33.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
33.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
32.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
32.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
32.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
32.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
32.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
31.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
30.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
30.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
30.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
30.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
30.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
29.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
29.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
29.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
29.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
29.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
29.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
29.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
29.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
29.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
28.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
28.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
28.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
28.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
28.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
28.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
27.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
27.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
27.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
27.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
27.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
27.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
27.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
27.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
27.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
26.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
26.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
26.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
26.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
26.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
26.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
25.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
25.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
25.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
25.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
25.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
25.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
25.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
25.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
25.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
25.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
24.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
24.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
24.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
24.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
24.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
24.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
24.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
24.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
24.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
23.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
23.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
23.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
23.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
23.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
23.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
23.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
23.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
23.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
23.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
23.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
23.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
23.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
22.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
22.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
22.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
22.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
21.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
21.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
21.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
21.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
21.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
21.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
21.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
21.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
21.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
21.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
21.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
21.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
21.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
21.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
21.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
21.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
21.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
20.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
20.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
20.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
20.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
20.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
20.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
20.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
20.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
20.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
20.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
20.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
20.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
20.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
19.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
19.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
19.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
19.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
19.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
19.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
19.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
19.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
19.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
19.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
19.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
19.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
19.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
19.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
19.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
19.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
19.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
18.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
18.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
18.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
18.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
18.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
18.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
18.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
18.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
18.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
18.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
18.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
18.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
18.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
18.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
18.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
18.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
17.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
17.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
17.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
17.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
17.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
17.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
17.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
17.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
17.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
17.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
17.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
17.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
17.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
17.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
17.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
17.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
17.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
17.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
17.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
17.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
16.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
16.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
16.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
16.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
16.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
16.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
16.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
16.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
16.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
16.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
16.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
16.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
16.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
16.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
16.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
16.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
16.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
15.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
15.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
15.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
15.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
15.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
15.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
15.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
15.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
15.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
15.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
15.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
15.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
15.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
15.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
15.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
15.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
15.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
15.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
15.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
15.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
15.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
15.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
14.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
14.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
14.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
14.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
14.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
14.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
14.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
14.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
14.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
14.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
14.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
14.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
14.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
13.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
13.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
13.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
13.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
13.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
13.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
13.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
13.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
13.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
13.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
13.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
13.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
13.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
13.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
13.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
13.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
13.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
13.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
12.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
12.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
12.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
12.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
12.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
12.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
12.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
12.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
12.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
12.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
12.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
12.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
12.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
12.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
12.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
12.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
12.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
12.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
12.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
12.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
12.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
11.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
11.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
11.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
11.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
11.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
11.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
11.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
11.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
11.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
11.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
11.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
10.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
10.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
10.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
10.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
10.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
10.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
10.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
10.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
10.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
10.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
10.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
10.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
10.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
10.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
10.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
10.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
10.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
10.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
10.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
10.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
10.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
10.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
9.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
9.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
9.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
9.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
9.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
9.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
9.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
9.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
9.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
9.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
9.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
9.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
9.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
9.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
9.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
9.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
8.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
8.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
8.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
8.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
8.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
8.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
8.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
8.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
8.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
7.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
7.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
7.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
7.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
7.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
7.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
7.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
7.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
7.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
7.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
7.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
7.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
7.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
7.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
7.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
6.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
6.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
6.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
6.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
6.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
6.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
6.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
6.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
6.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
6.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
6.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
6.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
5.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
5.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
5.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
5.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
5.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
5.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
5.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
5.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
5.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
5.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
4.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
4.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
4.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
4.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
4.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
4.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
3.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
3.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
3.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
3.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
3.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
3.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
3.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
3.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
2.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
2.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
2.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
2.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
2.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
1.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
1.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
1.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
0.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SREBF1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
207.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
120.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
112.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
108.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
103.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
98.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
68.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
67.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
63.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
54.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
51.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
47.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
42.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
39.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
39.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
39.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
38.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
37.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
36.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
36.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
35.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
35.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
35.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
34.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
33.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
33.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
32.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
32.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
32.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
32.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
31.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
31.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
30.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
30.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
30.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
30.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
30.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
28.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
28.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
28.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
27.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
27.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
27.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
27.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
27.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
26.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
26.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
25.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
25.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
24.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
24.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
24.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
23.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
21.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
20.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
20.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
19.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
19.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
19.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
18.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
18.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
18.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
17.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
17.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
16.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
16.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
16.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
16.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
15.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
14.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
14.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
14.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
13.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
13.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
12.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
12.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
12.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
12.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
12.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
11.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
11.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
11.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
10.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
10.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
9.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
9.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
9.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
9.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
8.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
7.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SREBF1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
301.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
97.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
67.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
54.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
53.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
49.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
49.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
47.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
46.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
45.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
44.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
44.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
44.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
43.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
43.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
42.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
42.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
41.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
40.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
39.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
38.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
38.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
37.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
37.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
36.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
36.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
35.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
35.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
35.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
35.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
34.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
33.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
33.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
33.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
32.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
32.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
31.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
30.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
30.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
30.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
30.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
30.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
29.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
29.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
29.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
28.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
28.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
28.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
28.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
28.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
28.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
28.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
27.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
27.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
27.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
26.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
26.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
26.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
25.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
25.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
25.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
25.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
25.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
25.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
25.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
24.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
24.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
23.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
23.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
23.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
23.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
23.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
23.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
22.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
22.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
22.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
22.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
21.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
21.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
21.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
20.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
20.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
20.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
20.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
20.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
20.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
20.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
19.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
19.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
19.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
19.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
18.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
18.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
18.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
18.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
18.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
18.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
18.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
17.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
17.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
17.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
17.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
17.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
17.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
17.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
17.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
16.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
16.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
16.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
16.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
16.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
16.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
16.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
16.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
15.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
15.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
15.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
15.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
15.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
15.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
15.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
15.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
15.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
15.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
15.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
15.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
14.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
14.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
14.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
14.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
14.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
14.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
13.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
13.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
13.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
13.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
13.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
13.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
12.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
11.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
11.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
11.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
11.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
11.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
11.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
11.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
10.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
10.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
10.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
10.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
10.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
10.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
10.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
10.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
10.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
10.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
9.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
9.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
9.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
9.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
9.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
9.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
9.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
9.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
9.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
9.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
9.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
9.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
9.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
9.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
9.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
8.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
8.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
8.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
8.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
8.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
8.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
8.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
8.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
8.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
8.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
8.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
8.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
8.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
7.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
7.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
7.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
7.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
7.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
7.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
7.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
6.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
6.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
6.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
6.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
6.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
5.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
5.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
5.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
5.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
5.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
4.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
4.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
4.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
4.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
4.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
4.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
4.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
4.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
3.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
3.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
3.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
3.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
3.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
3.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
3.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
3.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
2.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002350011
Tumor
0.9
CPT0078830003
Tumor
0.6
CPT0086360003
Tumor
0.6
CPT0076330003
Tumor
0.4
CPT0088780001
Normal
0.4
CPT0088710001
Normal
0.4
CPT0063630003
Tumor
0.4
CPT0006950001
Normal
0.3
CPT0002370001
Normal
0.3
CPT0065810003
Tumor
0.3
CPT0014370004
Tumor
0.2
CPT0078840001
Normal
0.2
CPT0010110003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0092800003
Normal
0.2
CPT0019130003
Tumor
0.2
CPT0023710001
Normal
0.2
CPT0010120001
Normal
0.2
CPT0007860003
Tumor
0.2
CPT0063640001
Normal
0.2
CPT0000870016
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0077500001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0001500009
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0019160001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0077110003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0088760003
Tumor
-0.2
CPT0001180009
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0078990003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0007320003
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0086820003
Tumor
-0.3
CPT0075570001
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0001270001
Normal
-0.3
CPT0084590001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0000890001
Normal
-0.4
CPT0015910003
Tumor
-0.5
CPT0081990003
Tumor
-0.8
CPT0063320003
Tumor
-0.9
CPT0001190001
Normal
-1.6
CPT0026410003
Tumor
N/A
CPT0000790001
Normal
N/A
CPT0088570001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014470001
Normal
N/A
CPT0069160003
Tumor
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
