HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:29.6 nTPM
HPA Brain:90.0 nTPM
GTEx:29.6 nTPM
FANTOM5:54.8 Scaled Tags Per Million
Pig:28.3 nTPM
Mouse:32.7 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045061Antibody HPA054237Antibody CAB026243Antibody CAB069428
Glial cells Not detectedNot detectedLowMedium
Neuronal cells LowNot detectedMediumHigh








HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 90.0
Sample id Sample description nTPM
Hippocampus
nTPM: 59.2
2529 Female, age 94, left hemisphere 74.2
2148 Female, age 91, left hemisphere 62.4
1898 Male, age 80, left hemisphere 60.2
2621 Female, age 67, right hemisphere 54.4
1911 Female, age 85, right hemisphere 53.0
1855 Male, age 76, left hemisphere 51.2
Dentate gyrus
nTPM: 59.5
2530 Female, age 94, left hemisphere 72.8
2246 Female, age 85, both hemispheres 67.6
2531 Female, age 67, both hemispheres 59.7
2528 Male, age 74, both hemispheres 55.4
2010 Male, age 76, both hemispheres 54.1
1927 Female, age 91, both hemispheres 47.6
Entorhinal gyrus
nTPM: 90.0
2613 Female, age 94, left hemisphere 100.9
2764 Male, age 80, right hemisphere 98.9
2686 Male, age 75, right hemisphere 93.0
1787 Male, age 76, left hemisphere 85.7
1938 Female, age 85, left hemisphere 84.2
2117 Female, age 91, right hemisphere 77.6
Hippocampus, CA1
nTPM: 58.9
2082 Female, age 91, right hemisphere 83.6
2045 Male, age 76, both hemispheres 60.2
2527 Male, age 74, both hemispheres 58.8
1873 Female, age 85, both hemispheres 49.8
2749 Male, age 80, left hemisphere 42.1
Hippocampus, CA2
nTPM: 59.4
2437 Female, age 94, left hemisphere 68.0
2113 Female, age 91, right hemisphere 63.7
1940 Female, age 85, left hemisphere 60.6
1963 Male, age 80, left hemisphere 58.9
2249 Male, age 74, both hemispheres 54.0
1892 Male, age 76, both hemispheres 51.4
Hippocampus, CA3
nTPM: 59.2
2861 Female, age 67, both hemispheres 72.9
2620 Female, age 94, left hemisphere 70.0
1891 Female, age 85, both hemispheres 61.0
1867 Male, age 76, both hemispheres 57.1
2436 Male, age 74, both hemispheres 48.4
2137 Male, age 80, left hemisphere 45.7
Parahippocampal cortex
nTPM: 72.2
1990 Female, age 91, right hemisphere 85.3
1850 Male, age 80, both hemispheres 82.5
2692 Male, age 74, both hemispheres 80.9
2622 Female, age 67, right hemisphere 75.3
2693 Female, age 94, both hemispheres 74.0
2532 Female, age 72, left hemisphere 70.2
2018 Male, age 76, both hemispheres 68.5
1933 Female, age 85, both hemispheres 67.5
2245 Female, age 91, both hemispheres 61.0
2250 Female, age 67, right hemisphere 57.4
Perirhinal gyrus
nTPM: 77.6
1794 Male, age 80, right hemisphere 81.4
2848 Male, age 76, right hemisphere 81.2
1847 Female, age 91, left hemisphere 79.4
1841 Female, age 85, right hemisphere 73.2
2521 Female, age 94, right hemisphere 72.7
Subiculum
nTPM: 68.9
1977 Female, age 85, both hemispheres 93.6
2619 Male, age 74, both hemispheres 73.4
2042 Male, age 76, both hemispheres 69.2
2729 Female, age 91, right hemisphere 62.5
1901 Male, age 80, both hemispheres 62.1
2438 Female, age 94, left hemisphere 52.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 29.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.6
Samples: 197

Max nTPM: 55.1
Min nTPM: 12.3
Std nTPM: 8.7
Median nTPM: 27.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 55.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 55.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 51.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 50.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 50.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 47.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 46.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 46.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 46.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 46.5
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 46.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 54.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.8
FF:10153-102I9 76 years, female 68.2
FF:10169-103B7 60 years, female 41.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 28.3
Pig sample Sample description nTPM
Subiculum
nTPM: 28.3
Samples: 4

Max nTPM: 38.0
Min nTPM: 18.2
Sample A Female 38.0
Sample B Female 28.2
Sample C Male 28.9
Sample D Male 18.2
Dorsal hippocampus
nTPM: 20.1
Samples: 4

Max nTPM: 24.5
Min nTPM: 14.2
Sample A Female 20.8
Sample B Female 20.7
Sample C Male 24.5
Sample D Male 14.2
Entorhinal cortex
nTPM: 20.0
Samples: 4

Max nTPM: 23.5
Min nTPM: 16.7
Sample A Female 22.0
Sample B Female 17.8
Sample C Male 23.5
Sample D Male 16.7
Ventral hippocampus
nTPM: 21.6
Samples: 4

Max nTPM: 27.9
Min nTPM: 15.6
Sample A Female 15.6
Sample B Female 22.9
Sample C Male 27.9
Sample D Male 19.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 32.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.7
Samples: 4

Max nTPM: 39.0
Min nTPM: 29.9
Sample A Male 29.9
Sample B Male 31.4
Sample C Female 30.6
Sample D Female 39.0
Hippocampal formation
nTPM: 20.9
Samples: 4

Max nTPM: 23.5
Min nTPM: 18.9
Sample A Male 23.5
Sample B Male 18.9
Sample C Female 19.7
Sample D Female 21.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
70301276 Antisense, RP_050309_02_C11, Mouse strain C57BL/6J (56 days, male) 3.4
69013365 Antisense, RP_050309_02_C11, Mouse strain C57BL/6J (56 days, male) 2.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org