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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
JMJD6 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
31.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
24.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
22.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
22.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
21.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
20.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
20.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
20.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
19.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
19.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
18.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
17.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
17.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
17.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
17.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
15.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
14.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
14.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
14.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
12.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
11.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
11.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
11.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
10.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
10.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
10.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
10.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
9.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
8.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
8.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
8.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
7.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
7.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
7.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
7.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
6.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
6.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
6.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
5.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
5.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
5.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
4.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
3.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
JMJD6 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
150.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
65.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
64.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
44.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
44.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
44.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
43.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
43.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
41.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
41.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
41.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
40.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
38.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
38.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
37.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
37.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
36.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
36.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
36.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
35.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
35.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
34.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
34.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
34.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
33.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
32.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
32.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
31.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
30.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
30.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
30.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
30.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
29.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
29.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
29.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
29.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
29.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
29.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
29.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
28.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
28.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
28.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
27.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
27.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
27.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
26.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
26.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
26.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
26.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
26.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
26.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
26.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
26.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
26.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
26.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
25.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
25.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
25.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
25.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
25.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
25.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
25.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
25.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
25.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
25.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
25.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
24.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
24.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
24.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
24.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
24.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
24.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
24.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
24.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
24.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
24.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
24.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
23.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
23.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
23.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
23.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
23.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
23.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
23.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
23.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
23.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
23.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
22.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
22.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
22.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
22.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
22.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
22.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
22.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
22.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
22.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
22.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
22.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
22.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
22.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
21.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
21.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
21.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
21.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
21.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
21.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
21.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
21.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
21.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
21.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
21.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
21.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
20.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
20.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
20.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
20.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
20.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
20.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
20.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
20.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
20.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
20.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
20.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
20.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
20.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
20.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
19.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
19.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
19.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
19.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
19.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
19.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
19.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
19.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
19.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
19.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
19.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
19.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
19.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
19.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
19.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
19.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
19.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
18.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
18.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
18.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
18.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
18.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
18.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
18.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
18.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
18.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
18.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
18.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
18.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
18.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
18.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
18.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
18.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
18.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
18.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
18.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
18.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
17.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
17.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
17.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
17.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
17.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
17.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
17.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
17.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
17.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
17.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
17.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
17.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
17.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
17.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
17.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
17.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
17.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
17.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
17.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
16.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
16.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
16.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
16.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
16.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
16.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
16.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
16.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
16.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
16.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
16.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
16.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
16.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
16.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
16.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
16.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
16.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
16.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
16.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
16.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
16.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
16.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
16.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
16.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
16.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
16.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
16.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
16.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
16.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
16.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
16.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
16.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
16.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
16.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
16.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
16.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
15.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
15.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
15.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
15.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
15.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
15.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
15.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
15.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
15.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
15.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
15.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
15.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
15.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
15.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
15.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
15.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
15.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
15.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
15.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
15.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
15.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
15.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
15.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
15.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
15.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
15.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
15.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
15.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
15.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
15.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
15.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
15.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
15.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
15.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
15.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
15.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
15.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
14.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
14.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
14.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
14.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
14.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
14.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
14.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
14.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
14.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
14.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
14.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
14.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
14.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
14.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
14.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
14.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
14.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
14.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
14.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
14.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
14.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
13.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
13.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
13.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
13.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
13.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
13.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
13.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
13.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
13.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
13.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
13.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
13.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
13.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
13.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
13.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
13.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
13.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
13.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
13.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
13.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
13.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
13.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
13.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
13.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
13.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
13.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
13.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
13.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
13.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
13.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
13.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
12.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
12.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
12.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
12.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
12.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
12.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
12.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
12.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
12.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
12.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
12.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
12.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
12.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
12.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
12.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
12.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
12.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
12.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
12.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
12.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
12.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
12.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
12.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
12.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
12.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
12.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
11.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
11.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
11.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
11.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
11.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
11.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
11.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
11.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
11.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
11.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
11.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
11.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
11.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
11.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
11.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
11.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
11.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
11.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
11.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
11.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
10.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
10.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
10.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
10.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
10.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
10.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
10.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
10.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
10.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
10.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
10.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
9.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
9.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
9.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
9.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
9.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
9.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
9.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
9.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
9.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
9.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
9.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
8.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
8.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
8.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
8.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
8.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
8.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
8.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
8.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
8.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
8.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
8.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
8.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
8.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
8.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
8.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
7.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
7.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
7.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
7.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
7.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
7.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
6.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
5.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
5.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
4.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
JMJD6 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
80.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
43.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
42.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
41.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
39.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
35.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
32.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
31.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
31.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
30.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
30.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
30.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
29.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
29.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
29.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
29.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
27.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
27.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
26.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
26.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
26.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
26.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
25.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
25.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
25.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
24.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
24.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
24.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
24.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
23.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
23.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
22.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
22.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
22.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
22.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
22.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
22.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
22.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
22.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
21.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
21.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
21.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
21.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
20.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
20.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
20.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
20.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
20.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
19.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
19.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
19.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
19.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
19.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
18.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
18.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
18.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
18.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
18.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
17.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
17.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
17.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
17.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
17.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
17.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
16.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
16.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
16.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
16.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
15.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
15.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
15.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
15.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
15.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
15.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
15.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
15.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
14.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
14.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
14.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
14.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
13.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
12.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
10.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
9.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
9.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
JMJD6 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
52.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
44.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
41.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
39.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
37.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
36.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
34.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
34.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
33.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
33.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
32.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
31.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
31.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
30.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
30.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
30.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
30.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
29.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
28.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
28.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
27.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
27.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
27.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
26.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
26.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
26.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
26.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
26.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
25.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
25.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
25.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
24.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
24.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
24.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
24.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
24.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
24.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
23.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
23.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
23.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
23.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
23.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
23.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
22.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
22.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
22.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
22.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
22.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
22.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
22.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
21.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
21.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
21.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
21.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
21.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
20.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
20.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
20.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
20.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
20.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
20.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
20.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
20.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
20.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
20.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
20.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
20.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
19.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
19.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
19.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
19.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
19.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
19.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
19.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
19.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
19.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
19.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
19.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
18.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
18.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
18.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
18.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
18.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
18.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
18.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
18.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
18.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
18.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
18.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
18.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
18.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
18.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
17.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
17.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
17.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
17.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
17.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
17.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
17.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
17.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
17.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
17.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
17.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
17.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
16.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
16.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
16.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
16.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
16.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
16.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
16.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
16.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
16.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
16.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
16.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
16.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
16.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
16.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
16.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
16.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
15.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
15.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
15.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
15.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
15.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
15.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
15.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
15.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
15.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
15.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
15.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
15.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
15.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
14.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
14.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
14.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
14.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
14.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
14.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
14.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
14.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
14.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
14.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
13.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
13.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
13.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
13.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
13.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
13.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
13.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
13.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
13.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
13.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
13.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
12.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
12.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
12.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
12.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
12.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
12.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
12.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
12.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
12.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
12.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
12.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
12.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
12.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
12.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
11.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
11.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
11.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
11.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
11.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
11.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
11.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
11.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
11.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
11.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
11.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
11.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
11.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
11.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
11.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
11.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
10.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
10.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
10.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
10.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
10.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
10.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
10.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
10.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
9.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
9.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
9.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
9.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
9.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
9.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
9.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
8.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
8.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
8.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
8.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
7.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
7.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
7.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
7.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
7.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
7.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
7.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
7.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
7.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
6.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
6.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
6.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
6.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
6.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
6.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
6.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
6.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
5.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
5.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
5.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
4.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
4.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
4.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
3.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
2.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0006440003
Tumor
1.1
CPT0001340003
Tumor
1.1
CPT0012550003
Tumor
1.1
CPT0069160003
Tumor
0.7
CPT0023350003
Tumor
0.7
CPT0076330003
Tumor
0.7
CPT0078930003
Tumor
0.7
CPT0077310003
Tumor
0.6
CPT0063630003
Tumor
0.6
CPT0007860003
Tumor
0.6
CPT0006900003
Tumor
0.6
CPT0012180003
Tumor
0.6
CPT0001180009
Tumor
0.6
CPT0012670003
Tumor
0.6
CPT0012080003
Tumor
0.6
CPT0088690003
Tumor
0.5
CPT0065930003
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0026410003
Tumor
0.5
CPT0023690003
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0089460004
Tumor
0.5
CPT0012900004
Tumor
0.5
CPT0079410003
Tumor
0.5
CPT0019990003
Tumor
0.5
CPT0077110003
Tumor
0.5
CPT0077490003
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0071150004
Tumor
0.4
CPT0001500009
Tumor
0.4
CPT0075560003
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0024670003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0065810003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0009060003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0064370003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0092290003
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0078800003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0087040003
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0088550004
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0092160003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0079270003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0025880003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0011410003
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0009020003
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0085670003
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0077320001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0081620001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0079430001
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0069190001
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0088710001
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0002270011
Tumor
-0.3
CPT0086830003
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0092190003
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0025610001
Normal
-0.3
CPT0001510001
Normal
-0.4
CPT0001230001
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0088570001
Normal
-0.4
CPT0076350001
Normal
-0.4
CPT0079180003
Tumor
-0.4
CPT0001350001
Normal
-0.4
CPT0010170001
Normal
-0.4
CPT0025060001
Normal
-0.4
CPT0077140001
Normal
-0.4
CPT0092740003
Normal
-0.4
CPT0001270001
Normal
-0.4
CPT0089040001
Normal
-0.4
CPT0084590001
Normal
-0.4
CPT0066430001
Normal
-0.4
CPT0013790003
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0000660001
Normal
-0.4
CPT0006730001
Normal
-0.4
CPT0065820001
Normal
-0.4
CPT0006950001
Normal
-0.5
CPT0086970003
Normal
-0.5
CPT0092800003
Normal
-0.5
CPT0006530001
Normal
-0.5
CPT0075570001
Normal
-0.5
CPT0075170001
Normal
-0.5
CPT0010120001
Normal
-0.5
CPT0063640001
Normal
-0.5
CPT0001190001
Normal
-0.6
CPT0078660003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
