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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUCB2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
114.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
326.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
278.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
269.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
235.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
234.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
232.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
228.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
206.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
181.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
179.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
175.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
166.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
165.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
159.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
154.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
152.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
143.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
138.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
134.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
133.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
129.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
124.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
119.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
116.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
115.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
115.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
114.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
113.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
112.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
111.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
108.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
102.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
101.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
100.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
100.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
98.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
95.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
87.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
86.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
86.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
82.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
80.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
77.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
71.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
70.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
68.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
67.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
65.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
64.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
64.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
59.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
58.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
56.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
55.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
53.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
50.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
50.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
46.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
39.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
37.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
34.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
30.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
27.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUCB2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
74.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
675.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
301.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
205.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
205.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
202.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
193.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
191.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
187.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
176.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
174.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
166.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
148.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
145.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
136.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
134.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
131.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
130.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
130.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
126.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
125.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
123.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
121.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
121.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
120.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
119.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
119.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
119.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
118.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
118.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
118.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
117.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
117.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
116.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
115.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
113.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
112.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
112.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
112.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
112.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
110.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
110.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
110.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
109.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
109.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
109.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
109.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
108.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
108.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
108.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
108.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
107.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
107.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
106.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
106.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
105.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
105.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
105.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
105.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
105.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
105.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
104.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
104.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
103.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
102.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
102.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
102.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
102.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
101.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
101.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
101.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
101.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
100.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
100.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
99.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
99.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
98.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
98.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
98.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
98.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
98.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
97.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
97.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
97.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
96.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
96.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
96.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
95.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
94.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
94.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
94.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
93.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
93.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
92.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
92.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
92.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
92.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
92.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
91.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
91.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
91.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
91.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
91.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
91.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
91.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
91.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
90.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
90.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
90.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
90.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
90.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
90.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
90.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
90.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
90.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
89.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
89.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
89.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
89.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
89.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
88.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
88.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
88.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
88.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
88.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
88.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
88.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
87.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
87.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
87.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
86.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
86.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
86.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
85.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
85.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
85.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
85.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
85.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
85.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
85.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
84.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
84.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
84.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
84.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
84.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
84.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
84.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
84.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
83.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
83.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
83.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
83.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
83.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
83.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
83.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
82.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
82.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
82.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
81.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
81.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
81.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
81.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
81.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
81.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
80.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
80.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
80.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
80.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
80.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
80.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
79.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
79.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
79.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
79.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
79.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
79.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
78.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
78.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
78.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
78.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
77.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
77.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
77.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
77.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
77.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
77.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
77.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
76.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
76.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
76.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
76.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
76.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
76.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
76.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
75.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
75.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
75.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
75.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
75.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
75.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
75.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
75.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
75.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
75.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
74.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
74.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
74.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
74.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
74.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
74.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
74.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
74.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
73.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
73.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
73.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
73.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
73.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
73.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
73.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
73.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
73.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
73.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
73.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
73.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
72.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
72.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
72.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
72.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
72.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
72.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
72.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
72.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
72.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
71.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
71.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
71.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
71.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
71.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
71.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
71.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
71.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
71.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
70.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
70.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
70.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
70.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
70.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
70.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
70.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
70.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
69.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
69.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
69.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
69.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
69.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
69.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
69.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
69.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
69.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
69.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
68.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
68.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
68.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
68.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
68.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
68.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
68.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
68.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
68.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
68.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
68.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
67.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
67.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
67.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
67.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
67.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
67.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
67.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
67.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
67.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
67.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
67.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
66.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
66.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
66.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
66.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
66.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
66.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
66.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
66.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
66.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
66.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
66.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
65.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
65.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
65.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
65.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
65.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
65.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
65.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
65.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
65.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
65.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
65.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
64.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
64.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
64.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
64.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
64.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
64.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
64.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
64.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
64.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
63.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
63.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
63.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
63.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
63.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
63.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
63.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
63.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
63.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
63.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
62.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
62.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
62.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
62.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
62.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
62.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
62.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
62.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
62.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
62.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
62.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
61.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
61.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
61.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
61.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
61.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
61.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
60.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
60.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
60.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
60.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
60.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
60.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
60.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
60.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
59.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
59.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
59.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
59.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
59.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
59.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
59.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
59.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
59.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
59.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
58.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
58.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
58.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
58.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
58.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
58.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
58.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
58.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
58.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
58.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
57.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
57.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
57.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
57.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
57.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
57.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
57.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
57.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
57.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
56.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
56.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
56.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
56.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
56.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
55.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
55.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
55.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
55.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
54.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
54.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
54.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
54.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
54.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
54.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
54.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
54.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
54.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
54.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
54.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
53.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
53.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
53.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
53.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
53.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
53.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
53.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
52.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
52.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
52.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
52.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
52.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
52.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
52.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
51.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
51.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
51.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
51.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
51.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
51.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
51.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
50.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
50.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
50.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
50.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
50.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
49.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
49.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
49.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
49.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
49.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
49.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
49.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
49.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
48.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
48.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
48.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
48.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
48.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
48.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
48.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
47.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
47.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
47.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
47.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
47.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
47.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
47.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
46.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
46.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
46.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
45.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
45.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
45.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
45.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
45.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
44.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
44.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
44.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
44.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
44.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
44.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
44.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
44.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
44.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
44.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
43.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
43.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
43.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
43.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
43.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
43.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
43.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
42.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
42.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
41.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
41.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
41.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
40.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
40.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
40.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
40.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
40.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
39.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
39.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
39.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
38.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
38.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
38.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
38.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
38.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
36.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
36.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
36.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
36.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
35.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
35.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
34.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
33.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
33.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
33.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
32.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
32.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
32.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
32.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
31.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
31.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
30.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
30.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
30.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
29.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
29.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
29.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
28.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
28.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
26.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
26.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
24.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
24.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
23.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
22.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
22.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
21.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUCB2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
88.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
178.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
171.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
162.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
161.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
153.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
152.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
149.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
145.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
135.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
134.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
132.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
130.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
122.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
120.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
119.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
117.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
117.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
116.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
114.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
111.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
111.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
110.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
109.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
109.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
108.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
107.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
105.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
103.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
103.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
103.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
101.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
100.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
100.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
100.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
99.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
99.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
99.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
97.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
97.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
95.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
95.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
94.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
92.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
91.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
91.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
90.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
90.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
89.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
88.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
86.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
83.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
81.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
79.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
78.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
78.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
78.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
77.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
76.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
76.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
75.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
74.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
74.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
73.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
73.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
73.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
72.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
72.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
72.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
72.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
71.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
70.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
70.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
68.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
68.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
67.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
66.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
65.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
65.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
63.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
62.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
61.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
61.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
59.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
59.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
59.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
57.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
56.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
56.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
53.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
51.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
49.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
45.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
42.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
41.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
40.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
37.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
37.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
31.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
30.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUCB2 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
327.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
209.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
198.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
141.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
133.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
133.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
132.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
130.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
129.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
115.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
111.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
109.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
103.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
97.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
92.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
89.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
88.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
87.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
87.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
86.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
82.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
82.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
81.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
77.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
76.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
75.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
75.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
73.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
71.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
71.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
71.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
67.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
64.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
63.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
63.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
63.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
62.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
60.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
59.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
59.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
59.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
59.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
57.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
55.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
55.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
55.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
54.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
53.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
53.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
53.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
52.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
52.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
52.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
52.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
52.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
52.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
52.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
51.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
50.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
50.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
50.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
50.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
49.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
48.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
48.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
48.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
48.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
47.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
47.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
47.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
47.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
46.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
46.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
46.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
46.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
46.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
46.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
46.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
46.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
45.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
45.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
45.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
45.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
45.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
45.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
44.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
44.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
44.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
44.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
44.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
43.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
43.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
43.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
43.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
43.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
43.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
42.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
42.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
42.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
42.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
42.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
42.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
42.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
41.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
41.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
41.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
41.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
40.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
40.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
40.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
40.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
40.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
39.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
39.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
39.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
38.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
38.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
38.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
38.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
38.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
38.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
38.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
38.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
38.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
37.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
37.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
37.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
37.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
36.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
36.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
36.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
36.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
36.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
36.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
36.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
36.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
35.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
35.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
35.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
34.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
34.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
34.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
34.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
33.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
33.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
33.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
33.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
33.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
33.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
33.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
32.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
32.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
32.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
32.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
32.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
32.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
32.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
31.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
31.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
31.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
31.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
31.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
30.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
30.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
30.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
30.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
30.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
30.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
30.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
30.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
30.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
30.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
29.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
29.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
29.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
29.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
29.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
29.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
29.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
28.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
28.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
28.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
28.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
28.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
27.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
27.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
27.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
27.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
27.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
26.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
26.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
26.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
26.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
26.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
25.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
25.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
25.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
25.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
25.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
25.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
24.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
24.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
24.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
24.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
23.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
23.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
23.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
23.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
23.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
22.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
22.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
22.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
22.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
22.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
21.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
21.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
21.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
21.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
21.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
21.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
21.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
20.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
20.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
19.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
19.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
19.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
19.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
18.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
18.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
18.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
18.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
17.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
17.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
17.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
17.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
17.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
17.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
16.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
16.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
16.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
16.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
16.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
15.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
15.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
15.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
15.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
14.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
14.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
14.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
14.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
13.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
12.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
12.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
12.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
12.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
11.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
11.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
10.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
9.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
9.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
9.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
8.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
6.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
6.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
5.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
4.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
3.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
2.1
CPT0001180009
Tumor
1.9
CPT0088550004
Tumor
1.7
CPT0012180003
Tumor
1.3
CPT0079180003
Tumor
1.3
CPT0002350011
Tumor
1.1
CPT0012550003
Tumor
1.0
CPT0088690003
Tumor
0.9
CPT0011410003
Tumor
0.8
CPT0023350003
Tumor
0.8
CPT0069160003
Tumor
0.8
CPT0079270003
Tumor
0.7
CPT0002270011
Tumor
0.7
CPT0063630003
Tumor
0.7
CPT0086950003
Tumor
0.6
CPT0078660003
Tumor
0.6
CPT0086820003
Tumor
0.6
CPT0077110003
Tumor
0.6
CPT0010110003
Tumor
0.6
CPT0015730003
Tumor
0.6
CPT0024670003
Tumor
0.6
CPT0065430003
Tumor
0.5
CPT0071150004
Tumor
0.5
CPT0009060003
Tumor
0.5
CPT0025880003
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0078800003
Tumor
0.4
CPT0092290003
Tumor
0.4
CPT0017850003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0092160003
Tumor
0.4
CPT0077490003
Tumor
0.4
CPT0001260009
Tumor
0.4
CPT0066470004
Tumor
0.4
CPT0012900004
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0026410003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0092790003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0079480003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0010170001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0025170003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0000780007
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0065750003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0019130003
Tumor
-0.2
CPT0000890001
Normal
-0.2
CPT0011240003
Tumor
-0.2
CPT0078940001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0078990003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0015910003
Tumor
-0.3
CPT0079430001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0086030003
Tumor
-0.3
CPT0006950001
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0012770003
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0006530001
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0000790001
Normal
-0.3
CPT0009020003
Normal
-0.3
CPT0087050003
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0088710001
Normal
-0.3
CPT0001340003
Tumor
-0.3
CPT0086970003
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0069010001
Normal
-0.4
CPT0001350001
Normal
-0.4
CPT0023360001
Normal
-0.4
CPT0077140001
Normal
-0.4
CPT0013790003
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0092800003
Normal
-0.4
CPT0020130001
Normal
-0.4
CPT0078840001
Normal
-0.4
CPT0066520001
Normal
-0.4
CPT0082010001
Normal
-0.4
CPT0065930003
Tumor
-0.4
CPT0000660001
Normal
-0.4
CPT0023710001
Normal
-0.4
CPT0064400001
Normal
-0.4
CPT0000640003
Tumor
-0.4
CPT0086830003
Normal
-0.4
CPT0088640003
Normal
-0.4
CPT0025060001
Normal
-0.4
CPT0014130001
Normal
-0.4
CPT0012920003
Normal
-0.5
CPT0079000001
Normal
-0.5
CPT0020020001
Normal
-0.5
CPT0007870001
Normal
-0.5
CPT0088500001
Normal
-0.5
CPT0092310003
Normal
-0.5
CPT0088970003
Tumor
-0.5
CPT0009080003
Normal
-0.5
CPT0001230001
Normal
-0.5
CPT0007470001
Normal
-0.5
CPT0017450001
Normal
-0.5
CPT0089480003
Normal
-0.6
CPT0092740003
Normal
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
