We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUCKS1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
99.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
57.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
56.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
54.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
54.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
51.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
50.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
46.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
45.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
44.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
41.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
40.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
39.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
39.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
39.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
39.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
39.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
39.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
39.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
38.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
38.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
37.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
37.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
36.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
36.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
36.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
34.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
34.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
33.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
32.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
32.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
31.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
31.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
30.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
29.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
29.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
26.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
26.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
25.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
25.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
24.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
24.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
23.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
23.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
22.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
21.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
20.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
20.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
20.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
19.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
19.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
19.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
18.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
17.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
17.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
17.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
15.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
15.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
13.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
13.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
12.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
12.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUCKS1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
60.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
181.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
148.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
131.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
121.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
121.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
116.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
115.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
114.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
114.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
114.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
114.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
112.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
112.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
112.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
111.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
109.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
109.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
109.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
109.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
109.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
109.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
107.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
107.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
107.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
106.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
105.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
103.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
103.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
103.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
102.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
102.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
102.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
102.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
102.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
100.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
99.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
98.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
98.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
98.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
97.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
96.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
96.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
95.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
94.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
93.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
92.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
92.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
92.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
91.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
91.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
91.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
91.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
91.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
90.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
89.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
89.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
89.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
88.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
88.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
88.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
88.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
87.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
87.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
87.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
87.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
86.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
86.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
86.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
85.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
85.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
85.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
85.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
85.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
85.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
85.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
84.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
84.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
84.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
84.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
84.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
84.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
84.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
84.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
83.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
83.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
83.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
83.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
82.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
82.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
82.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
82.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
82.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
81.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
81.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
81.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
81.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
81.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
81.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
81.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
81.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
80.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
80.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
80.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
80.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
80.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
80.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
80.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
80.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
80.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
80.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
79.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
79.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
79.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
79.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
79.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
79.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
79.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
79.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
78.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
78.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
78.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
78.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
78.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
78.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
78.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
78.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
77.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
77.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
76.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
76.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
76.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
75.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
75.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
75.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
74.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
74.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
74.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
74.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
74.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
74.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
73.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
73.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
73.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
73.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
73.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
73.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
72.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
72.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
72.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
72.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
72.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
72.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
71.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
71.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
71.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
71.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
71.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
71.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
71.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
71.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
71.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
70.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
70.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
70.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
69.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
69.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
69.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
69.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
69.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
69.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
69.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
69.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
69.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
68.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
68.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
68.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
68.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
68.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
68.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
68.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
68.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
68.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
67.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
67.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
67.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
67.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
67.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
67.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
66.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
66.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
66.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
65.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
65.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
65.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
65.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
65.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
65.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
65.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
65.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
65.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
64.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
64.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
64.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
64.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
64.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
64.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
64.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
64.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
64.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
64.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
64.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
64.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
64.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
64.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
63.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
63.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
63.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
63.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
63.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
63.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
63.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
63.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
62.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
62.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
62.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
62.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
62.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
62.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
62.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
62.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
61.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
61.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
61.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
61.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
61.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
61.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
61.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
61.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
61.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
61.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
61.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
60.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
60.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
60.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
60.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
60.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
60.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
60.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
60.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
60.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
60.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
59.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
59.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
59.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
59.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
59.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
59.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
59.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
59.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
58.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
58.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
58.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
58.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
58.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
58.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
58.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
58.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
58.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
58.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
58.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
57.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
57.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
57.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
57.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
57.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
57.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
57.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
57.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
57.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
57.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
57.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
56.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
56.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
56.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
56.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
56.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
56.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
56.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
56.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
56.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
55.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
55.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
55.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
55.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
55.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
55.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
54.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
54.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
54.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
54.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
54.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
54.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
54.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
54.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
54.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
54.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
53.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
53.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
53.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
53.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
53.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
53.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
53.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
53.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
52.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
52.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
52.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
52.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
52.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
52.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
52.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
52.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
52.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
51.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
51.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
51.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
51.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
51.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
51.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
51.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
51.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
51.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
51.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
50.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
50.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
50.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
50.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
50.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
50.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
50.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
50.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
49.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
49.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
49.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
49.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
49.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
49.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
49.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
49.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
49.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
48.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
48.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
48.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
48.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
48.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
48.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
48.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
48.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
47.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
47.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
47.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
47.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
47.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
47.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
47.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
47.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
47.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
46.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
46.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
45.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
45.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
45.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
45.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
45.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
45.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
44.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
44.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
44.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
44.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
44.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
43.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
43.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
43.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
43.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
43.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
43.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
43.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
42.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
42.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
42.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
42.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
42.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
42.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
42.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
42.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
42.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
42.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
42.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
42.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
41.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
41.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
41.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
41.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
41.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
40.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
40.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
40.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
40.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
40.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
40.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
39.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
39.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
39.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
39.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
38.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
38.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
38.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
38.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
38.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
38.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
38.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
38.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
38.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
37.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
37.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
37.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
37.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
37.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
37.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
37.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
37.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
36.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
36.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
36.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
36.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
35.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
35.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
35.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
35.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
35.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
35.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
34.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
34.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
34.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
34.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
34.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
34.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
34.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
33.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
33.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
33.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
33.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
33.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
33.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
32.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
32.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
32.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
32.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
32.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
32.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
31.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
31.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
31.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
31.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
31.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
31.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
30.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
30.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
30.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
30.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
30.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
29.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
29.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
29.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
29.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
29.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
29.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
29.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
29.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
29.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
28.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
28.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
28.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
28.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
28.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
27.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
27.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
27.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
26.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
26.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
26.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
26.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
26.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
25.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
24.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
24.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
24.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
24.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
24.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
23.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
23.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
23.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
23.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
23.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
23.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
23.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
23.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
21.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
21.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
21.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
19.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
17.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
16.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
15.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
15.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
12.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
10.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
10.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUCKS1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
68.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
161.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
137.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
133.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
119.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
113.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
112.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
110.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
104.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
97.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
93.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
93.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
92.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
92.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
92.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
91.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
90.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
90.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
89.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
89.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
88.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
86.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
86.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
85.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
84.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
83.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
83.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
81.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
81.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
77.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
77.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
76.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
76.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
75.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
75.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
75.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
75.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
74.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
73.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
73.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
73.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
73.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
72.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
71.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
71.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
71.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
69.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
68.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
67.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
65.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
64.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
63.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
63.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
62.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
62.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
62.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
62.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
61.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
60.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
59.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
57.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
57.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
56.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
56.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
55.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
55.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
54.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
54.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
54.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
53.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
52.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
51.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
51.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
51.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
51.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
50.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
49.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
49.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
49.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
48.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
48.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
48.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
48.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
45.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
44.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
42.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
42.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
42.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
42.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
39.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
39.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
38.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
38.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
37.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
36.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
35.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
33.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
30.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
28.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
27.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUCKS1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
149.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
130.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
129.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
128.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
128.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
113.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
110.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
108.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
108.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
107.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
105.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
104.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
96.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
96.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
91.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
87.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
87.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
85.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
83.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
81.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
79.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
78.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
77.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
76.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
75.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
73.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
72.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
72.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
71.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
71.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
71.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
70.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
70.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
70.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
70.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
69.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
68.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
68.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
67.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
67.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
67.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
67.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
67.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
66.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
65.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
65.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
65.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
65.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
65.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
64.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
64.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
64.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
63.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
63.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
63.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
63.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
61.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
61.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
60.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
60.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
60.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
60.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
60.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
60.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
60.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
59.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
59.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
59.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
58.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
58.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
57.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
57.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
57.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
57.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
57.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
56.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
56.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
55.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
55.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
55.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
55.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
55.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
55.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
55.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
55.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
54.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
54.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
54.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
54.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
52.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
51.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
51.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
51.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
51.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
51.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
51.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
51.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
51.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
50.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
50.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
50.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
49.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
49.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
49.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
49.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
49.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
49.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
49.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
48.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
48.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
48.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
48.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
47.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
47.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
46.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
46.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
46.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
46.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
46.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
46.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
45.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
45.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
45.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
45.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
45.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
44.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
43.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
43.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
43.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
43.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
43.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
42.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
42.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
42.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
42.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
42.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
42.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
41.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
41.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
41.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
41.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
41.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
41.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
40.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
40.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
40.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
39.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
39.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
39.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
38.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
38.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
38.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
37.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
37.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
37.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
37.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
37.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
37.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
37.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
37.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
36.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
36.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
36.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
36.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
36.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
36.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
36.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
36.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
36.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
36.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
36.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
36.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
35.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
35.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
35.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
35.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
35.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
35.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
35.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
34.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
34.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
34.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
34.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
33.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
33.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
33.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
33.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
33.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
32.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
32.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
32.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
32.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
32.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
32.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
32.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
32.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
31.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
31.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
31.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
30.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
30.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
30.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
30.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
30.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
30.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
30.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
30.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
29.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
29.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
28.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
28.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
28.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
28.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
28.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
28.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
27.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
27.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
27.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
27.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
27.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
26.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
26.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
26.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
26.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
26.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
26.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
26.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
25.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
25.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
25.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
25.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
25.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
25.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
25.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
25.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
24.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
24.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
24.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
24.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
24.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
24.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
24.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
24.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
24.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
24.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
23.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
23.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
23.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
23.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
23.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
22.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
22.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
22.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
22.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
22.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
22.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
22.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
22.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
21.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
21.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
21.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
20.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
20.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
20.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
19.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
18.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
18.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
18.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
17.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
16.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
16.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
16.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
15.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
15.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
15.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
14.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
12.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
11.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.7
CPT0012900004
Tumor
0.8
CPT0084590001
Normal
0.8
CPT0017850003
Tumor
0.8
CPT0014470001
Normal
0.8
CPT0025880003
Tumor
0.7
CPT0077320001
Normal
0.6
CPT0001510001
Normal
0.6
CPT0084560003
Tumor
0.6
CPT0086820003
Tumor
0.6
CPT0066520001
Normal
0.6
CPT0017410003
Tumor
0.6
CPT0088970003
Tumor
0.5
CPT0075720003
Tumor
0.5
CPT0071150004
Tumor
0.5
CPT0092190003
Normal
0.5
CPT0014370004
Tumor
0.5
CPT0086870003
Tumor
0.5
CPT0012640003
Normal
0.5
CPT0075170001
Normal
0.5
CPT0001230001
Normal
0.5
CPT0006440003
Tumor
0.5
CPT0089460004
Tumor
0.4
CPT0012920003
Normal
0.4
CPT0089480003
Normal
0.4
CPT0023710001
Normal
0.4
CPT0077110003
Tumor
0.4
CPT0014350001
Normal
0.4
CPT0019990003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0025610001
Normal
0.4
CPT0025580004
Tumor
0.4
CPT0077490003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0001550001
Normal
0.3
CPT0018250001
Normal
0.3
CPT0087040003
Tumor
0.3
CPT0025920001
Normal
0.3
CPT0007470001
Normal
0.3
CPT0076350001
Normal
0.3
CPT0081880003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0020020001
Normal
0.3
CPT0077140001
Normal
0.3
CPT0063330001
Normal
0.3
CPT0002370001
Normal
0.3
CPT0079300001
Normal
0.2
CPT0079510001
Normal
0.2
CPT0086950003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0000790001
Normal
0.2
CPT0019160001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0000780007
Tumor
0.2
CPT0087050003
Normal
0.2
CPT0014130001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0026410003
Tumor
0.2
CPT0064400001
Normal
0.2
CPT0086890003
Normal
0.2
CPT0088640003
Normal
0.2
CPT0065430003
Tumor
0.2
CPT0007870001
Normal
0.2
CPT0014450004
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0079380003
Tumor
0.2
CPT0075570001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0001270001
Normal
0.2
CPT0092730003
Tumor
0.2
CPT0025350003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0088550004
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0076330003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0081600003
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0075130003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0086360003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0025290003
Tumor
-0.1
CPT0006530001
Normal
-0.2
CPT0063630003
Tumor
-0.2
CPT0088780001
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0001540009
Tumor
-0.2
CPT0078840001
Normal
-0.2
CPT0023350003
Tumor
-0.2
CPT0088690003
Tumor
-0.2
CPT0023360001
Normal
-0.2
CPT0001220008
Tumor
-0.2
CPT0026420001
Normal
-0.2
CPT0078830003
Tumor
-0.2
CPT0088920001
Normal
-0.2
CPT0078930003
Tumor
-0.2
CPT0069190001
Normal
-0.2
CPT0006630003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0019130003
Tumor
-0.2
CPT0012090003
Normal
-0.2
CPT0064370003
Tumor
-0.3
CPT0001500009
Tumor
-0.3
CPT0011240003
Tumor
-0.3
CPT0015730003
Tumor
-0.3
CPT0020120003
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0079000001
Normal
-0.3
CPT0065690003
Tumor
-0.3
CPT0025050003
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0002270011
Tumor
-0.3
CPT0012290003
Normal
-0.4
CPT0069000003
Tumor
-0.4
CPT0021240003
Tumor
-0.4
CPT0082010001
Normal
-0.4
CPT0001180009
Tumor
-0.4
CPT0012570003
Normal
-0.4
CPT0015810003
Tumor
-0.4
CPT0092290003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0077310003
Tumor
-0.5
CPT0009000003
Tumor
-0.5
CPT0012550003
Tumor
-0.5
CPT0011410003
Tumor
-0.5
CPT0012180003
Tumor
-0.5
CPT0078660003
Tumor
-0.5
CPT0024670003
Tumor
-0.6
CPT0086030003
Tumor
-0.6
CPT0012280003
Tumor
-0.6
CPT0078800003
Tumor
-0.6
CPT0069160003
Tumor
-0.6
CPT0009080003
Normal
-0.7
CPT0009060003
Tumor
-0.7
CPT0065750003
Tumor
-0.7
CPT0012670003
Tumor
-0.8
CPT0001340003
Tumor
-0.8
CPT0014160003
Tumor
-1.0
CPT0078510003
Tumor
-1.2
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
