HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:35.3 nTPM
HPA Brain:34.7 nTPM
GTEx:35.3 nTPM
FANTOM5:27.1 Scaled Tags Per Million
Pig:36.7 nTPM
Mouse:44.5 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000282Antibody HPA000615
Glial cells LowNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 34.7
Sample id Sample description nTPM
Hippocampus
nTPM: 28.1
1898 Male, age 80, left hemisphere 34.1
2621 Female, age 67, right hemisphere 30.9
2148 Female, age 91, left hemisphere 27.6
2529 Female, age 94, left hemisphere 27.6
1855 Male, age 76, left hemisphere 25.9
1911 Female, age 85, right hemisphere 22.3
Dentate gyrus
nTPM: 27.8
2010 Male, age 76, both hemispheres 31.2
2530 Female, age 94, left hemisphere 31.1
1927 Female, age 91, both hemispheres 30.7
2531 Female, age 67, both hemispheres 28.2
2246 Female, age 85, both hemispheres 25.4
2528 Male, age 74, both hemispheres 20.2
Entorhinal gyrus
nTPM: 33.1
2764 Male, age 80, right hemisphere 37.5
1938 Female, age 85, left hemisphere 36.2
2686 Male, age 75, right hemisphere 33.5
2613 Female, age 94, left hemisphere 32.2
1787 Male, age 76, left hemisphere 32.0
2117 Female, age 91, right hemisphere 27.5
Hippocampus, CA1
nTPM: 31.1
2749 Male, age 80, left hemisphere 49.1
1873 Female, age 85, both hemispheres 29.1
2082 Female, age 91, right hemisphere 27.4
2045 Male, age 76, both hemispheres 27.3
2527 Male, age 74, both hemispheres 22.5
Hippocampus, CA2
nTPM: 29.5
1892 Male, age 76, both hemispheres 42.4
1963 Male, age 80, left hemisphere 34.9
1940 Female, age 85, left hemisphere 28.7
2437 Female, age 94, left hemisphere 28.7
2113 Female, age 91, right hemisphere 23.4
2249 Male, age 74, both hemispheres 18.7
Hippocampus, CA3
nTPM: 27.8
2137 Male, age 80, left hemisphere 35.4
2620 Female, age 94, left hemisphere 31.5
1867 Male, age 76, both hemispheres 31.1
2861 Female, age 67, both hemispheres 27.5
1891 Female, age 85, both hemispheres 23.1
2436 Male, age 74, both hemispheres 18.2
Parahippocampal cortex
nTPM: 29.3
1850 Male, age 80, both hemispheres 36.6
2245 Female, age 91, both hemispheres 34.3
1990 Female, age 91, right hemisphere 33.6
2532 Female, age 72, left hemisphere 31.1
1933 Female, age 85, both hemispheres 30.5
2018 Male, age 76, both hemispheres 28.2
2692 Male, age 74, both hemispheres 26.2
2693 Female, age 94, both hemispheres 25.2
2622 Female, age 67, right hemisphere 23.9
2250 Female, age 67, right hemisphere 23.6
Perirhinal gyrus
nTPM: 34.7
1794 Male, age 80, right hemisphere 40.1
1847 Female, age 91, left hemisphere 37.0
1841 Female, age 85, right hemisphere 35.4
2521 Female, age 94, right hemisphere 32.0
2848 Male, age 76, right hemisphere 29.2
Subiculum
nTPM: 25.0
1977 Female, age 85, both hemispheres 31.1
1901 Male, age 80, both hemispheres 30.9
2438 Female, age 94, left hemisphere 26.8
2042 Male, age 76, both hemispheres 22.7
2619 Male, age 74, both hemispheres 20.6
2729 Female, age 91, right hemisphere 18.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 35.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.3
Samples: 197

Max nTPM: 62.8
Min nTPM: 14.4
Std nTPM: 9.1
Median nTPM: 33.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 62.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 57.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 57.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 56.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 56.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 55.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 55.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 55.0
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 54.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 52.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 52.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 27.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.1
FF:10169-103B7 60 years, female 29.0
FF:10153-102I9 76 years, female 25.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 36.7
Pig sample Sample description nTPM
Subiculum
nTPM: 36.2
Samples: 4

Max nTPM: 48.0
Min nTPM: 28.9
Sample A Female 48.0
Sample B Female 32.2
Sample C Male 35.5
Sample D Male 28.9
Dorsal hippocampus
nTPM: 35.2
Samples: 4

Max nTPM: 41.4
Min nTPM: 27.9
Sample A Female 41.4
Sample B Female 34.5
Sample C Male 36.8
Sample D Male 27.9
Entorhinal cortex
nTPM: 36.7
Samples: 4

Max nTPM: 38.2
Min nTPM: 35.9
Sample A Female 36.0
Sample B Female 38.2
Sample C Male 35.9
Sample D Male 36.7
Ventral hippocampus
nTPM: 35.7
Samples: 4

Max nTPM: 42.4
Min nTPM: 26.8
Sample A Female 33.9
Sample B Female 26.8
Sample C Male 42.4
Sample D Male 39.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 44.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.5
Samples: 4

Max nTPM: 50.1
Min nTPM: 41.6
Sample A Male 43.3
Sample B Male 43.0
Sample C Female 41.6
Sample D Female 50.1
Hippocampal formation
nTPM: 42.8
Samples: 4

Max nTPM: 45.9
Min nTPM: 40.1
Sample A Male 40.1
Sample B Male 43.2
Sample C Female 45.9
Sample D Female 41.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
68321668 Antisense, RP_041130_02_H04, Mouse strain C57BL/6J (56 days, male) 10.0
74821691 Antisense, RP_060321_02_C02, Mouse strain C57BL/6J (56 days, male) 8.9

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