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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COASY is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
119.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
50.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
47.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
47.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
46.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
40.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
40.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
38.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
38.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
38.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
38.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
37.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
36.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
35.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
35.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
34.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
34.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
34.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
33.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
33.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
33.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
33.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
33.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
32.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
32.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
31.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
31.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
31.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
30.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
30.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
30.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
30.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
30.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
29.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
29.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
28.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
27.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
27.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
26.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
26.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
25.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
24.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
24.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
23.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
23.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
23.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
23.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
23.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
22.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
22.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
22.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
22.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
22.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
21.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
20.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
18.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
17.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
14.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
13.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
12.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
10.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
10.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COASY is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
103.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
68.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
66.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
65.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
62.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
61.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
61.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
59.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
56.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
55.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
53.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
52.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
50.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
50.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
49.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
48.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
48.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
48.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
47.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
46.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
46.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
45.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
45.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
45.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
45.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
44.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
44.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
44.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
44.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
44.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
43.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
43.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
43.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
43.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
43.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
42.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
42.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
42.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
41.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
41.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
41.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
41.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
41.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
41.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
41.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
41.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
41.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
41.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
41.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
40.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
40.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
40.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
40.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
40.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
40.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
40.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
40.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
40.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
40.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
40.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
40.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
39.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
39.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
39.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
39.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
39.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
39.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
39.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
39.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
39.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
39.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
39.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
39.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
39.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
39.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
39.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
38.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
38.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
38.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
38.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
38.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
38.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
38.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
38.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
38.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
38.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
38.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
38.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
37.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
37.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
37.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
37.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
37.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
37.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
37.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
37.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
37.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
37.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
36.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
36.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
36.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
36.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
36.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
36.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
36.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
36.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
36.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
36.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
36.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
36.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
36.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
36.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
36.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
36.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
35.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
35.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
35.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
35.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
35.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
35.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
35.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
35.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
35.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
35.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
35.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
35.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
35.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
35.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
35.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
34.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
34.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
34.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
34.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
34.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
34.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
34.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
34.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
34.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
34.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
34.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
34.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
34.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
34.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
34.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
34.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
34.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
34.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
34.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
33.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
33.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
33.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
33.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
33.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
33.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
33.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
33.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
33.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
33.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
33.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
33.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
33.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
33.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
33.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
33.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
33.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
33.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
33.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
33.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
33.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
33.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
33.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
33.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
33.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
33.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
32.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
32.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
32.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
32.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
32.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
32.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
32.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
32.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
32.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
32.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
32.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
32.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
32.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
32.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
32.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
32.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
32.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
31.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
31.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
31.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
31.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
31.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
31.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
31.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
31.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
31.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
31.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
31.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
31.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
31.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
31.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
31.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
31.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
31.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
31.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
31.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
31.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
31.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
31.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
31.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
31.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
30.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
30.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
30.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
30.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
30.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
30.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
30.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
30.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
30.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
30.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
30.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
30.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
30.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
30.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
30.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
30.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
30.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
30.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
30.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
30.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
30.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
30.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
30.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
29.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
29.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
29.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
29.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
29.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
29.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
29.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
29.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
29.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
29.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
29.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
29.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
29.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
29.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
29.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
29.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
29.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
29.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
29.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
29.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
29.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
29.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
29.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
29.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
29.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
29.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
29.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
28.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
28.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
28.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
28.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
28.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
28.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
28.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
28.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
28.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
28.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
28.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
28.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
28.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
28.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
28.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
28.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
28.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
28.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
28.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
28.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
28.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
28.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
28.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
28.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
28.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
28.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
27.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
27.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
27.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
27.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
27.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
27.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
27.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
27.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
27.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
27.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
27.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
27.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
27.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
27.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
27.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
27.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
27.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
27.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
27.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
27.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
27.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
27.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
27.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
27.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
27.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
27.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
27.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
27.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
27.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
26.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
26.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
26.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
26.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
26.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
26.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
26.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
26.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
26.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
26.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
26.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
26.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
26.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
26.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
26.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
25.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
25.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
25.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
25.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
25.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
25.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
25.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
25.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
25.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
25.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
25.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
25.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
25.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
25.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
25.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
25.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
25.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
25.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
25.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
25.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
25.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
25.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
25.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
24.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
24.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
24.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
24.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
24.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
24.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
24.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
24.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
24.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
24.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
24.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
24.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
24.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
24.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
24.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
24.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
24.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
24.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
24.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
23.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
23.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
23.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
23.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
23.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
23.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
23.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
23.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
23.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
23.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
23.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
23.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
23.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
22.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
22.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
22.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
22.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
22.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
22.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
22.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
22.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
22.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
22.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
22.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
22.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
22.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
22.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
22.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
22.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
22.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
22.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
22.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
21.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
21.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
21.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
21.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
21.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
21.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
21.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
21.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
21.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
21.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
21.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
21.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
21.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
20.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
20.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
20.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
20.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
20.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
20.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
20.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
20.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
20.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
20.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
20.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
20.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
20.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
19.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
19.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
19.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
19.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
19.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
19.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
18.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
18.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
18.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
18.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
18.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
18.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
18.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
18.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
18.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
18.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
18.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
17.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
17.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
17.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
17.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
17.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
17.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
17.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
17.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
17.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
17.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
17.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
16.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
16.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
16.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
15.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
15.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
15.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
15.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
15.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
15.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
14.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
14.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
14.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
14.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
14.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
14.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
14.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
14.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
13.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
13.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
12.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
12.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
12.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
11.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
11.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
11.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
10.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
5.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
4.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COASY is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
55.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
54.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
52.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
51.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
48.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
48.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
46.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
45.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
44.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
44.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
42.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
42.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
42.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
42.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
42.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
41.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
41.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
41.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
41.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
40.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
39.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
39.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
39.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
39.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
39.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
38.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
38.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
38.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
38.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
37.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
37.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
37.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
37.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
36.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
36.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
35.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
35.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
35.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
34.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
34.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
34.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
34.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
34.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
33.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
33.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
33.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
33.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
33.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
32.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
31.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
31.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
31.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
31.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
31.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
31.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
31.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
31.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
31.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
30.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
30.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
30.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
30.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
30.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
29.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
29.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
29.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
29.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
29.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
29.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
29.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
29.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
27.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
27.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
27.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
27.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
27.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
27.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
26.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
26.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
25.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
25.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
25.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
24.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
24.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
24.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
24.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
23.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
23.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
23.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
23.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
22.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
22.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
21.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
19.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
18.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
17.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COASY is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
60.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
206.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
186.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
159.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
144.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
137.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
131.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
125.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
123.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
116.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
113.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
110.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
109.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
107.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
103.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
102.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
101.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
100.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
99.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
98.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
96.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
95.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
95.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
93.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
92.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
92.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
92.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
91.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
91.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
91.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
90.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
89.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
86.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
85.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
85.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
84.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
84.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
84.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
84.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
84.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
83.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
83.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
83.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
83.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
82.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
81.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
81.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
81.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
81.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
80.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
80.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
79.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
79.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
78.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
78.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
78.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
78.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
77.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
77.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
77.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
76.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
76.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
76.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
76.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
75.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
75.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
75.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
75.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
75.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
74.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
74.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
74.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
73.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
73.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
73.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
73.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
73.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
73.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
73.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
72.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
72.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
72.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
71.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
71.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
71.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
71.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
71.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
71.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
70.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
70.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
70.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
69.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
69.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
69.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
68.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
68.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
68.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
68.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
68.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
68.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
68.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
66.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
66.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
66.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
66.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
66.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
66.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
66.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
65.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
65.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
64.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
64.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
64.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
64.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
64.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
63.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
63.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
63.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
62.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
62.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
62.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
62.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
62.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
60.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
60.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
60.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
59.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
59.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
59.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
58.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
58.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
58.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
58.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
58.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
58.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
58.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
58.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
57.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
57.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
57.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
56.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
56.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
56.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
56.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
56.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
56.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
55.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
55.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
55.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
55.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
55.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
55.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
55.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
55.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
55.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
54.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
54.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
54.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
54.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
54.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
54.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
54.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
53.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
53.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
53.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
52.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
52.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
52.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
52.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
52.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
52.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
52.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
52.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
51.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
51.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
51.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
51.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
51.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
51.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
51.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
50.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
50.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
50.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
50.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
50.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
49.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
49.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
49.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
48.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
48.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
48.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
47.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
47.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
46.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
46.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
46.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
46.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
46.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
46.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
46.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
46.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
45.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
45.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
45.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
45.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
45.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
45.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
45.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
44.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
44.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
44.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
43.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
42.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
42.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
42.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
42.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
42.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
41.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
41.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
41.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
41.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
41.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
40.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
40.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
40.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
39.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
39.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
39.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
38.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
38.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
38.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
38.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
37.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
37.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
37.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
37.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
37.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
36.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
35.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
35.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
35.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
33.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
33.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
33.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
33.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
32.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
32.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
32.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
31.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
30.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
30.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
30.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
30.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
29.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
29.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
29.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
29.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
29.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
29.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
28.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
28.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
28.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
27.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
27.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
27.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
25.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
25.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
24.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
23.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
23.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
23.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
23.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
23.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
22.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
22.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
21.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
21.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
16.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
13.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
13.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
11.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
6.5
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012570003
Normal
0.8
CPT0025610001
Normal
0.7
CPT0020020001
Normal
0.7
CPT0069010001
Normal
0.7
CPT0078800003
Tumor
0.7
CPT0092800003
Normal
0.7
CPT0081620001
Normal
0.6
CPT0009080003
Normal
0.6
CPT0012090003
Normal
0.6
CPT0079430001
Normal
0.6
CPT0089480003
Normal
0.6
CPT0006950001
Normal
0.6
CPT0076350001
Normal
0.6
CPT0078670001
Normal
0.6
CPT0012770003
Normal
0.6
CPT0065450001
Normal
0.6
CPT0092740003
Normal
0.6
CPT0077140001
Normal
0.6
CPT0088780001
Normal
0.6
CPT0014350001
Normal
0.5
CPT0092310003
Normal
0.5
CPT0010170001
Normal
0.5
CPT0007870001
Normal
0.5
CPT0000790001
Normal
0.5
CPT0007470001
Normal
0.5
CPT0078940001
Normal
0.5
CPT0077500001
Normal
0.4
CPT0017450001
Normal
0.4
CPT0088640003
Normal
0.4
CPT0026420001
Normal
0.4
CPT0009020003
Normal
0.4
CPT0023710001
Normal
0.4
CPT0001350001
Normal
0.4
CPT0082010001
Normal
0.4
CPT0087050003
Normal
0.4
CPT0020130001
Normal
0.4
CPT0006730001
Normal
0.4
CPT0079000001
Normal
0.4
CPT0086890003
Normal
0.4
CPT0078840001
Normal
0.4
CPT0012640003
Normal
0.4
CPT0064400001
Normal
0.4
CPT0023360001
Normal
0.4
CPT0002270011
Tumor
0.4
CPT0088500001
Normal
0.4
CPT0089040001
Normal
0.3
CPT0066430001
Normal
0.3
CPT0001230001
Normal
0.3
CPT0001180009
Tumor
0.3
CPT0002370001
Normal
0.3
CPT0088920001
Normal
0.3
CPT0088710001
Normal
0.3
CPT0025060001
Normal
0.3
CPT0025920001
Normal
0.3
CPT0086370003
Normal
0.3
CPT0075570001
Normal
0.3
CPT0001500009
Tumor
0.3
CPT0013790003
Normal
0.3
CPT0000890001
Normal
0.3
CPT0019160001
Normal
0.3
CPT0086830003
Normal
0.3
CPT0018250001
Normal
0.3
CPT0086970003
Normal
0.2
CPT0001550001
Normal
0.2
CPT0001540009
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0001510001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0012290003
Normal
0.2
CPT0079300001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0078530001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0001190001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0011410003
Tumor
0.1
CPT0079510001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0065810003
Tumor
-0.1
CPT0015730003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0007860003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0025580004
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0088480003
Tumor
-0.2
CPT0071150004
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0079180003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0088970003
Tumor
-0.2
CPT0086870003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0078660003
Tumor
-0.3
CPT0078990003
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0010120001
Normal
-0.3
CPT0088900003
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0001220008
Tumor
-0.3
CPT0069160003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0010110003
Tumor
-0.3
CPT0025230003
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0092160003
Tumor
-0.4
CPT0011240003
Tumor
-0.4
CPT0077490003
Tumor
-0.4
CPT0025050003
Tumor
-0.4
CPT0001270001
Normal
-0.4
CPT0010160003
Tumor
-0.4
CPT0000640003
Tumor
-0.4
CPT0065870003
Tumor
-0.4
CPT0012180003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0024670003
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0063320003
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0075130003
Tumor
-0.4
CPT0000780007
Tumor
-0.5
CPT0077320001
Normal
-0.5
CPT0086030003
Tumor
-0.5
CPT0087040003
Tumor
-0.5
CPT0075560003
Tumor
-0.5
CPT0086820003
Tumor
-0.5
CPT0023350003
Tumor
-0.5
CPT0085670003
Tumor
-0.5
CPT0065750003
Tumor
-0.5
CPT0089020003
Tumor
-0.5
CPT0015810003
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0092190003
Normal
-0.5
CPT0088630003
Tumor
-0.5
CPT0066480003
Tumor
-0.6
CPT0078930003
Tumor
-0.6
CPT0014370004
Tumor
-0.6
CPT0015910003
Tumor
-0.6
CPT0002350011
Tumor
-0.6
CPT0017850003
Tumor
-0.6
CPT0025350003
Tumor
-0.6
CPT0092730003
Tumor
-0.6
CPT0079410003
Tumor
-0.6
CPT0012280003
Tumor
-0.6
CPT0084590001
Normal
-0.6
CPT0006440003
Tumor
-0.7
CPT0086950003
Tumor
-0.7
CPT0063630003
Tumor
-0.7
CPT0081880003
Tumor
-0.7
CPT0025170003
Tumor
-0.7
CPT0065930003
Tumor
-0.7
CPT0025880003
Tumor
-0.7
CPT0079380003
Tumor
-0.7
CPT0001340003
Tumor
-0.7
CPT0081600003
Tumor
-0.7
CPT0012550003
Tumor
-0.8
CPT0088760003
Tumor
-0.8
CPT0084560003
Tumor
-0.8
CPT0014160003
Tumor
-0.9
CPT0088550004
Tumor
-1.0
CPT0014450004
Tumor
-1.0
CPT0025290003
Tumor
-1.0
CPT0065690003
Tumor
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.