HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:22.9 nTPM
HPA Brain:17.9 nTPM
GTEx:22.9 nTPM
FANTOM5:20.6 Scaled Tags Per Million
Pig:18.7 nTPM
Mouse:14.0 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA069832
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 17.9
Sample id Sample description nTPM
Hippocampus
nTPM: 16.7
2529 Female, age 94, left hemisphere 22.7
1898 Male, age 80, left hemisphere 17.2
1911 Female, age 85, right hemisphere 15.8
2148 Female, age 91, left hemisphere 15.3
1855 Male, age 76, left hemisphere 15.1
2621 Female, age 67, right hemisphere 14.0
Dentate gyrus
nTPM: 15.6
2530 Female, age 94, left hemisphere 19.9
2010 Male, age 76, both hemispheres 17.4
2528 Male, age 74, both hemispheres 16.6
2246 Female, age 85, both hemispheres 15.8
2531 Female, age 67, both hemispheres 12.9
1927 Female, age 91, both hemispheres 10.9
Entorhinal gyrus
nTPM: 14.9
2117 Female, age 91, right hemisphere 23.4
1938 Female, age 85, left hemisphere 14.9
2764 Male, age 80, right hemisphere 14.3
2686 Male, age 75, right hemisphere 13.6
1787 Male, age 76, left hemisphere 12.8
2613 Female, age 94, left hemisphere 10.4
Hippocampus, CA1
nTPM: 13.7
2527 Male, age 74, both hemispheres 17.5
1873 Female, age 85, both hemispheres 14.9
2082 Female, age 91, right hemisphere 14.7
2749 Male, age 80, left hemisphere 11.8
2045 Male, age 76, both hemispheres 9.5
Hippocampus, CA2
nTPM: 16.7
1963 Male, age 80, left hemisphere 18.5
2249 Male, age 74, both hemispheres 18.1
2113 Female, age 91, right hemisphere 18.0
2437 Female, age 94, left hemisphere 17.4
1940 Female, age 85, left hemisphere 16.3
1892 Male, age 76, both hemispheres 11.7
Hippocampus, CA3
nTPM: 14.1
2436 Male, age 74, both hemispheres 17.4
1891 Female, age 85, both hemispheres 15.6
2861 Female, age 67, both hemispheres 15.6
1867 Male, age 76, both hemispheres 14.3
2620 Female, age 94, left hemisphere 11.4
2137 Male, age 80, left hemisphere 10.1
Parahippocampal cortex
nTPM: 13.3
2692 Male, age 74, both hemispheres 16.1
2245 Female, age 91, both hemispheres 14.8
1990 Female, age 91, right hemisphere 14.6
2018 Male, age 76, both hemispheres 14.5
2532 Female, age 72, left hemisphere 14.3
1933 Female, age 85, both hemispheres 13.5
2622 Female, age 67, right hemisphere 13.4
2250 Female, age 67, right hemisphere 13.1
1850 Male, age 80, both hemispheres 11.0
2693 Female, age 94, both hemispheres 7.7
Perirhinal gyrus
nTPM: 11.0
1794 Male, age 80, right hemisphere 13.1
2521 Female, age 94, right hemisphere 12.0
1841 Female, age 85, right hemisphere 11.5
1847 Female, age 91, left hemisphere 9.7
2848 Male, age 76, right hemisphere 8.5
Subiculum
nTPM: 17.9
2438 Female, age 94, left hemisphere 20.7
2042 Male, age 76, both hemispheres 18.3
2619 Male, age 74, both hemispheres 18.3
2729 Female, age 91, right hemisphere 17.9
1977 Female, age 85, both hemispheres 16.6
1901 Male, age 80, both hemispheres 15.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 22.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.9
Samples: 197

Max nTPM: 46.9
Min nTPM: 9.3
Std nTPM: 7.4
Median nTPM: 22.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 46.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 44.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 43.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 43.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 41.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 41.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 39.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 39.2
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 39.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 37.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 36.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 20.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.6
FF:10153-102I9 76 years, female 29.8
FF:10169-103B7 60 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 18.7
Pig sample Sample description nTPM
Subiculum
nTPM: 16.5
Samples: 4

Max nTPM: 19.1
Min nTPM: 14.4
Sample A Female 19.1
Sample B Female 14.4
Sample C Male 15.2
Sample D Male 17.3
Dorsal hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 22.1
Min nTPM: 11.8
Sample A Female 22.1
Sample B Female 14.1
Sample C Male 21.7
Sample D Male 11.8
Entorhinal cortex
nTPM: 14.0
Samples: 4

Max nTPM: 15.7
Min nTPM: 10.7
Sample A Female 15.4
Sample B Female 14.1
Sample C Male 15.7
Sample D Male 10.7
Ventral hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 24.2
Min nTPM: 15.2
Sample A Female 19.1
Sample B Female 15.2
Sample C Male 24.2
Sample D Male 16.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 14.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.9
Samples: 4

Max nTPM: 14.6
Min nTPM: 10.3
Sample A Male 10.3
Sample B Male 14.6
Sample C Female 11.7
Sample D Female 10.9
Hippocampal formation
nTPM: 13.9
Samples: 4

Max nTPM: 16.2
Min nTPM: 11.4
Sample A Male 11.4
Sample B Male 12.1
Sample C Female 16.0
Sample D Female 16.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
68301819 Antisense, RP_041130_01_H05, Mouse strain C57BL/6J (56 days, male) 1.1

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