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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YBX3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
143.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
93.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
90.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
86.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
85.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
74.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
71.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
70.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
70.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
68.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
68.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
67.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
67.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
57.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
56.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
56.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
55.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
52.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
51.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
49.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
48.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
48.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
48.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
47.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
47.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
46.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
44.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
43.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
43.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
42.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
40.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
40.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
39.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
39.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
39.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
39.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
38.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
38.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
38.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
37.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
37.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
36.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
36.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
35.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
34.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
34.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
33.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
30.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
30.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
29.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
29.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
29.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
28.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
28.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
27.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
24.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
21.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
21.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
19.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
16.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
15.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
15.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YBX3 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
135.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
443.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
413.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
376.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
337.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
336.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
314.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
310.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
306.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
306.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
300.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
293.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
289.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
279.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
271.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
269.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
266.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
255.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
255.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
254.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
254.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
252.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
250.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
249.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
247.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
247.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
247.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
246.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
240.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
240.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
240.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
239.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
237.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
237.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
237.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
235.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
234.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
233.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
232.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
230.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
229.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
228.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
227.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
226.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
220.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
218.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
218.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
217.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
216.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
214.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
214.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
214.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
212.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
211.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
211.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
209.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
209.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
208.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
206.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
206.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
205.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
205.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
205.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
204.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
204.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
203.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
203.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
201.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
201.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
200.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
200.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
200.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
199.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
198.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
198.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
197.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
197.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
195.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
195.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
194.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
193.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
192.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
190.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
189.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
188.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
187.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
187.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
186.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
186.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
186.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
184.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
183.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
183.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
180.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
179.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
178.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
178.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
178.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
177.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
175.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
175.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
175.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
175.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
175.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
175.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
175.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
175.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
174.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
174.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
173.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
173.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
172.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
172.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
172.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
172.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
172.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
170.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
170.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
170.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
169.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
169.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
168.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
168.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
168.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
168.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
168.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
167.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
167.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
167.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
166.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
166.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
165.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
165.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
165.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
165.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
165.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
164.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
164.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
164.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
163.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
163.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
160.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
160.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
159.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
159.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
158.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
158.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
157.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
157.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
157.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
157.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
157.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
157.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
157.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
156.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
156.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
156.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
155.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
155.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
154.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
154.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
152.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
152.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
151.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
151.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
151.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
150.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
150.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
150.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
150.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
150.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
150.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
149.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
148.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
148.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
148.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
148.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
148.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
148.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
148.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
147.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
147.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
146.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
146.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
146.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
146.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
144.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
144.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
144.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
143.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
143.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
142.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
142.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
142.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
142.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
141.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
141.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
141.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
140.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
140.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
138.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
138.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
137.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
137.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
137.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
136.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
136.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
136.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
136.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
136.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
136.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
135.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
135.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
135.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
135.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
135.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
135.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
135.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
135.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
135.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
134.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
134.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
134.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
133.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
133.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
133.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
133.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
133.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
132.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
132.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
132.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
131.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
131.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
131.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
131.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
130.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
130.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
130.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
130.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
129.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
129.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
129.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
129.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
128.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
128.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
128.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
128.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
128.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
128.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
128.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
127.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
127.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
127.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
126.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
126.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
126.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
126.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
125.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
125.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
124.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
124.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
124.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
124.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
124.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
124.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
123.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
123.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
122.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
122.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
122.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
122.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
122.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
122.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
121.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
121.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
121.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
120.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
120.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
120.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
120.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
119.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
119.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
119.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
119.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
118.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
118.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
118.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
118.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
118.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
117.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
117.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
117.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
116.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
116.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
115.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
115.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
115.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
115.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
115.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
115.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
115.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
115.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
114.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
114.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
114.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
113.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
113.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
113.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
113.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
113.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
113.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
113.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
112.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
112.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
112.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
112.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
112.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
112.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
111.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
111.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
111.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
111.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
111.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
111.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
111.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
111.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
111.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
110.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
110.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
110.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
109.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
109.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
109.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
109.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
109.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
109.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
108.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
108.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
108.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
108.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
107.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
107.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
107.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
106.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
106.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
106.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
105.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
105.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
105.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
105.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
105.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
104.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
104.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
104.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
104.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
104.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
104.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
103.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
103.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
103.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
103.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
103.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
102.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
102.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
102.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
102.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
102.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
101.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
101.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
101.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
101.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
101.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
101.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
100.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
100.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
100.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
100.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
99.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
99.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
99.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
99.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
99.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
98.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
98.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
98.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
98.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
98.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
98.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
97.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
97.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
97.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
97.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
97.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
96.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
95.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
95.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
94.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
94.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
94.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
93.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
93.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
93.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
93.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
93.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
92.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
91.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
91.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
91.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
91.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
91.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
91.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
90.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
90.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
90.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
90.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
90.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
89.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
89.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
88.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
88.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
87.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
87.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
87.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
87.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
87.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
87.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
87.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
86.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
86.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
86.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
85.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
85.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
85.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
84.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
84.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
84.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
84.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
83.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
83.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
83.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
83.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
83.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
82.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
82.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
80.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
80.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
79.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
79.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
78.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
78.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
77.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
77.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
77.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
77.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
77.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
76.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
76.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
76.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
75.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
75.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
74.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
73.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
72.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
72.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
72.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
72.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
71.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
71.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
71.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
71.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
71.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
70.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
70.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
70.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
70.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
70.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
67.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
66.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
66.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
66.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
65.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
65.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
64.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
64.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
63.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
63.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
63.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
63.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
62.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
61.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
61.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
60.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
60.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
59.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
59.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
58.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
58.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
56.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
54.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
53.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
52.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
49.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
49.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
48.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
47.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
47.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
45.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
44.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
44.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
44.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
43.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
37.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
37.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
36.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
34.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
34.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
29.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
28.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
26.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
24.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
21.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YBX3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
197.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
1043.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
470.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
463.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
442.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
441.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
434.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
383.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
354.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
335.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
335.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
326.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
304.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
283.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
269.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
267.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
262.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
262.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
260.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
254.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
254.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
253.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
243.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
240.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
233.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
230.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
226.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
226.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
224.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
221.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
219.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
214.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
212.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
206.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
205.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
200.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
199.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
192.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
188.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
185.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
183.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
182.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
180.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
179.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
176.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
175.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
174.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
172.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
171.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
169.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
169.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
168.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
167.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
165.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
165.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
157.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
156.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
156.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
153.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
150.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
149.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
149.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
145.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
142.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
142.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
141.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
141.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
140.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
137.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
136.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
136.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
134.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
134.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
133.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
127.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
126.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
126.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
125.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
124.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
123.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
118.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
118.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
117.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
116.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
116.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
115.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
113.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
111.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
110.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
108.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
103.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
101.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
101.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
94.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
93.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
93.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
86.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
69.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
57.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
56.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YBX3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
109.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
299.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
274.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
273.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
257.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
256.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
244.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
242.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
241.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
229.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
229.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
226.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
220.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
215.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
208.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
204.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
199.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
199.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
198.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
197.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
197.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
196.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
193.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
191.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
190.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
190.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
189.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
187.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
186.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
185.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
181.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
178.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
178.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
177.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
177.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
176.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
175.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
174.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
170.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
168.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
168.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
166.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
165.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
164.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
161.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
161.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
159.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
159.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
158.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
157.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
156.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
156.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
156.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
155.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
154.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
154.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
153.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
153.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
152.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
149.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
149.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
148.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
148.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
147.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
146.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
144.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
143.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
143.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
143.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
141.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
141.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
141.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
141.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
140.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
139.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
139.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
138.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
138.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
137.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
136.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
135.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
134.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
134.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
134.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
133.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
133.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
132.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
132.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
132.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
130.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
130.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
129.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
129.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
129.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
128.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
128.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
127.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
127.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
127.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
127.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
127.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
126.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
126.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
126.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
125.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
124.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
122.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
122.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
122.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
121.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
121.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
120.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
118.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
118.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
118.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
117.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
117.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
115.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
115.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
115.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
115.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
112.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
112.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
111.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
111.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
110.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
110.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
109.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
109.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
109.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
108.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
108.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
108.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
107.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
107.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
106.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
106.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
106.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
106.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
105.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
105.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
105.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
104.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
103.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
103.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
103.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
103.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
102.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
102.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
102.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
102.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
101.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
99.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
98.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
98.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
98.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
97.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
97.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
96.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
94.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
94.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
94.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
93.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
92.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
91.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
91.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
91.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
91.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
90.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
87.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
87.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
87.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
87.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
87.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
86.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
85.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
84.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
83.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
83.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
83.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
83.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
82.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
82.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
81.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
81.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
79.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
79.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
78.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
78.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
78.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
78.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
78.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
77.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
77.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
76.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
76.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
76.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
76.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
75.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
74.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
74.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
74.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
73.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
72.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
71.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
71.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
71.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
70.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
70.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
69.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
68.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
67.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
66.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
66.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
66.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
66.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
65.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
65.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
65.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
65.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
64.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
64.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
63.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
63.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
62.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
61.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
61.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
60.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
60.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
60.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
60.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
59.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
58.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
58.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
58.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
57.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
57.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
57.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
56.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
55.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
54.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
53.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
53.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
52.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
52.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
52.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
52.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
51.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
50.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
50.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
49.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
48.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
48.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
45.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
44.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
44.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
43.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
43.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
43.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
43.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
43.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
42.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
42.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
42.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
41.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
39.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
39.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
37.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
36.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
35.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
34.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
32.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
32.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
31.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
29.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
23.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
21.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
20.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
17.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
16.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
15.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
9.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
7.5
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0014450004
Tumor
1.3
CPT0024670003
Tumor
1.2
CPT0009000003
Tumor
1.0
CPT0001180009
Tumor
1.0
CPT0012550003
Tumor
1.0
CPT0086950003
Tumor
1.0
CPT0001540009
Tumor
0.9
CPT0001340003
Tumor
0.9
CPT0077110003
Tumor
0.9
CPT0086820003
Tumor
0.9
CPT0025880003
Tumor
0.9
CPT0069160003
Tumor
0.9
CPT0012670003
Tumor
0.9
CPT0000780007
Tumor
0.7
CPT0012080003
Tumor
0.7
CPT0088480003
Tumor
0.7
CPT0010160003
Tumor
0.7
CPT0025050003
Tumor
0.6
CPT0078510003
Tumor
0.6
CPT0063630003
Tumor
0.6
CPT0025230003
Tumor
0.6
CPT0000640003
Tumor
0.6
CPT0088690003
Tumor
0.6
CPT0071150004
Tumor
0.6
CPT0006440003
Tumor
0.6
CPT0001220008
Tumor
0.6
CPT0026410003
Tumor
0.6
CPT0088970003
Tumor
0.5
CPT0010110003
Tumor
0.5
CPT0025580004
Tumor
0.5
CPT0017410003
Tumor
0.5
CPT0079410003
Tumor
0.5
CPT0065430003
Tumor
0.5
CPT0077490003
Tumor
0.5
CPT0015810003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0007320003
Tumor
0.5
CPT0023350003
Tumor
0.4
CPT0021240003
Tumor
0.4
CPT0092290003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0001260009
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0081600003
Tumor
0.4
CPT0092730003
Tumor
0.4
CPT0017850003
Tumor
0.4
CPT0086360003
Tumor
0.4
CPT0019990003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0088760003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0012180003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0014160003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0019130003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0065750003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0020120003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0078800003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0006900003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0076330003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0065810003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0002270011
Tumor
-0.1
CPT0079510001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0025170003
Tumor
-0.3
CPT0000660001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0063640001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0017450001
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0081880003
Tumor
-0.4
CPT0088710001
Normal
-0.4
CPT0065820001
Normal
-0.4
CPT0079300001
Normal
-0.4
CPT0006530001
Normal
-0.4
CPT0007470001
Normal
-0.4
CPT0086830003
Normal
-0.4
CPT0024680001
Normal
-0.4
CPT0018250001
Normal
-0.4
CPT0088500001
Normal
-0.4
CPT0002370001
Normal
-0.4
CPT0014470001
Normal
-0.4
CPT0001350001
Normal
-0.4
CPT0092800003
Normal
-0.5
CPT0026420001
Normal
-0.5
CPT0023710001
Normal
-0.5
CPT0089480003
Normal
-0.5
CPT0088780001
Normal
-0.5
CPT0014130001
Normal
-0.5
CPT0087050003
Normal
-0.5
CPT0001510001
Normal
-0.5
CPT0079430001
Normal
-0.5
CPT0066430001
Normal
-0.5
CPT0007870001
Normal
-0.5
CPT0023360001
Normal
-0.5
CPT0081620001
Normal
-0.5
CPT0019160001
Normal
-0.5
CPT0010170001
Normal
-0.5
CPT0069190001
Normal
-0.5
CPT0025610001
Normal
-0.6
CPT0078840001
Normal
-0.6
CPT0077500001
Normal
-0.6
CPT0064400001
Normal
-0.6
CPT0000890001
Normal
-0.6
CPT0012570003
Normal
-0.6
CPT0013790003
Normal
-0.6
CPT0078940001
Normal
-0.6
CPT0066520001
Normal
-0.6
CPT0082010001
Normal
-0.6
CPT0086970003
Normal
-0.6
CPT0020130001
Normal
-0.6
CPT0025920001
Normal
-0.6
CPT0001550001
Normal
-0.6
CPT0025060001
Normal
-0.6
CPT0000790001
Normal
-0.6
CPT0063330001
Normal
-0.6
CPT0014350001
Normal
-0.6
CPT0006950001
Normal
-0.6
CPT0088640003
Normal
-0.6
CPT0079180003
Tumor
-0.6
CPT0020020001
Normal
-0.6
CPT0012920003
Normal
-0.6
CPT0078670001
Normal
-0.6
CPT0012640003
Normal
-0.7
CPT0012290003
Normal
-0.7
CPT0092740003
Normal
-0.7
CPT0009020003
Normal
-0.7
CPT0012770003
Normal
-0.7
CPT0065450001
Normal
-0.7
CPT0012090003
Normal
-0.7
CPT0088920001
Normal
-0.7
CPT0001230001
Normal
-0.7
CPT0079000001
Normal
-0.7
CPT0092310003
Normal
-0.7
CPT0069010001
Normal
-0.7
CPT0088570001
Normal
-0.8
CPT0006730001
Normal
-0.8
CPT0086890003
Normal
-0.8
CPT0078660003
Tumor
-0.9
CPT0009080003
Normal
-0.9
CPT0077140001
Normal
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
