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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SZRD1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
120.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
86.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
77.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
68.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
60.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
60.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
60.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
58.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
58.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
57.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
57.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
56.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
55.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
53.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
53.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
53.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
53.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
52.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
51.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
51.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
51.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
51.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
50.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
49.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
49.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
48.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
48.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
48.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
47.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
46.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
45.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
45.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
45.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
44.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
44.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
44.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
43.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
42.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
41.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
41.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
40.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
39.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
38.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
38.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
37.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
37.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
36.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
35.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
35.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
35.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
34.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
34.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
32.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
30.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
30.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
28.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
28.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
25.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
24.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
24.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
24.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
21.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
18.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SZRD1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
55.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
130.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
106.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
102.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
101.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
97.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
92.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
91.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
89.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
89.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
89.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
88.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
87.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
87.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
87.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
86.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
85.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
84.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
83.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
83.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
83.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
83.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
82.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
82.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
81.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
81.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
81.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
81.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
81.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
81.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
81.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
81.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
80.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
80.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
80.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
80.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
79.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
79.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
79.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
79.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
79.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
79.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
79.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
79.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
79.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
78.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
78.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
78.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
78.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
78.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
78.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
78.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
77.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
77.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
77.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
77.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
76.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
76.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
76.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
76.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
76.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
76.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
75.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
75.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
75.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
75.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
75.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
74.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
74.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
74.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
74.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
74.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
74.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
74.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
73.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
73.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
73.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
73.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
73.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
73.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
73.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
73.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
73.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
73.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
73.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
72.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
72.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
71.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
71.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
71.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
71.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
70.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
70.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
70.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
70.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
70.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
70.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
70.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
70.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
70.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
70.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
69.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
69.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
69.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
69.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
69.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
69.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
69.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
69.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
68.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
68.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
68.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
68.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
68.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
68.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
68.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
68.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
68.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
68.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
67.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
67.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
67.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
67.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
67.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
67.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
67.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
67.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
67.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
67.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
67.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
66.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
66.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
66.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
66.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
66.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
66.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
66.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
66.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
66.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
66.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
66.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
66.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
66.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
66.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
66.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
65.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
65.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
65.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
65.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
65.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
65.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
65.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
65.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
65.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
65.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
65.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
65.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
64.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
64.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
64.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
64.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
64.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
64.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
64.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
64.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
64.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
64.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
63.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
63.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
63.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
63.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
63.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
63.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
63.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
63.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
63.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
63.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
63.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
63.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
62.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
62.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
62.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
62.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
62.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
62.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
62.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
62.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
62.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
62.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
62.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
62.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
62.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
61.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
61.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
61.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
61.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
61.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
61.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
61.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
61.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
60.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
60.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
60.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
60.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
60.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
60.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
60.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
60.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
60.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
60.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
60.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
60.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
60.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
60.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
60.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
60.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
59.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
59.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
59.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
59.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
58.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
58.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
58.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
58.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
58.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
58.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
58.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
58.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
58.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
58.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
58.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
58.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
58.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
57.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
57.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
57.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
57.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
57.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
57.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
57.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
57.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
57.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
57.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
57.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
57.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
56.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
56.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
56.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
56.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
56.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
56.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
56.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
56.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
56.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
55.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
55.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
55.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
55.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
55.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
55.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
55.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
55.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
55.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
54.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
54.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
54.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
54.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
54.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
54.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
54.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
54.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
54.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
54.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
54.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
54.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
54.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
54.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
54.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
54.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
53.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
53.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
53.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
53.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
53.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
53.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
53.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
53.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
53.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
53.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
53.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
53.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
52.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
52.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
52.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
52.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
52.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
52.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
52.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
52.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
52.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
51.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
51.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
51.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
51.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
51.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
51.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
51.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
51.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
51.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
51.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
51.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
50.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
50.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
50.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
50.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
50.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
50.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
50.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
50.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
50.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
49.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
49.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
49.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
49.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
49.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
49.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
49.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
49.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
49.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
49.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
49.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
48.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
48.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
48.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
48.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
48.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
48.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
48.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
48.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
48.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
48.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
48.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
48.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
48.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
48.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
48.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
48.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
48.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
48.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
47.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
47.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
47.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
47.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
47.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
47.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
47.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
47.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
47.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
47.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
46.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
46.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
46.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
46.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
46.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
46.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
46.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
46.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
46.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
46.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
46.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
45.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
45.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
45.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
45.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
45.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
45.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
45.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
45.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
45.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
44.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
44.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
44.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
44.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
44.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
44.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
44.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
44.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
44.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
43.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
43.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
43.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
43.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
43.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
43.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
43.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
43.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
43.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
43.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
43.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
42.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
42.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
42.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
42.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
42.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
41.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
41.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
41.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
41.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
41.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
41.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
40.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
40.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
40.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
40.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
39.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
39.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
39.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
39.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
39.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
39.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
39.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
39.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
38.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
38.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
38.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
38.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
38.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
38.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
38.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
38.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
38.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
38.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
38.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
38.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
37.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
37.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
37.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
37.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
37.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
37.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
37.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
37.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
37.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
36.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
36.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
36.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
36.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
36.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
35.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
35.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
35.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
35.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
35.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
35.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
34.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
34.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
34.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
34.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
34.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
34.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
33.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
33.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
33.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
33.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
33.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
32.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
32.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
32.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
32.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
32.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
31.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
31.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
31.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
30.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
30.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
30.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
30.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
29.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
28.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
28.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
28.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
28.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
27.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
27.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
27.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
27.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
27.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
27.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
27.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
27.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
27.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
27.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
27.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
26.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
26.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
26.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
25.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
25.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
25.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
25.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
24.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
24.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
24.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
23.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
23.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
23.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
23.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
22.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
22.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
21.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
21.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
20.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
20.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
18.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
17.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
17.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
17.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
17.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
14.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
12.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SZRD1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
53.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
97.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
76.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
76.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
76.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
75.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
74.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
73.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
73.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
73.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
72.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
71.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
70.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
70.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
69.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
68.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
68.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
68.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
67.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
67.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
67.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
66.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
64.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
64.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
63.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
62.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
62.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
61.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
61.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
61.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
60.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
59.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
59.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
59.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
59.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
58.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
58.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
58.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
57.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
57.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
57.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
56.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
56.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
56.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
56.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
56.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
55.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
54.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
54.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
54.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
53.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
53.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
52.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
52.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
51.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
51.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
51.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
51.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
50.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
50.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
49.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
49.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
48.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
48.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
48.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
48.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
47.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
47.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
47.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
45.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
45.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
45.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
45.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
45.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
44.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
44.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
43.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
42.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
42.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
41.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
40.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
40.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
40.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
40.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
39.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
38.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
36.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
35.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
35.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
35.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
35.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
34.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
32.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
32.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
31.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
29.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
28.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
27.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
26.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
22.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SZRD1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
132.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
107.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
105.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
90.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
86.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
83.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
82.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
81.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
80.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
79.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
78.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
78.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
77.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
76.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
76.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
75.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
74.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
73.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
72.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
71.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
71.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
69.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
69.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
69.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
68.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
68.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
68.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
67.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
67.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
67.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
66.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
65.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
65.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
65.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
65.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
63.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
63.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
62.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
62.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
61.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
61.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
61.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
60.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
60.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
60.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
59.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
59.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
59.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
59.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
58.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
58.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
57.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
57.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
57.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
57.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
57.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
56.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
56.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
56.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
56.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
56.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
55.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
55.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
55.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
55.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
55.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
55.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
55.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
55.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
54.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
54.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
54.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
54.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
54.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
53.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
53.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
53.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
53.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
52.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
52.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
52.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
51.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
51.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
51.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
51.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
51.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
50.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
50.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
50.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
50.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
50.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
50.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
50.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
49.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
49.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
49.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
49.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
49.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
49.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
49.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
48.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
48.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
48.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
48.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
48.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
48.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
47.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
47.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
47.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
47.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
47.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
47.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
46.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
46.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
46.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
46.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
46.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
46.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
46.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
46.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
45.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
45.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
45.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
45.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
45.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
44.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
44.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
44.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
44.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
44.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
44.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
44.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
44.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
44.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
43.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
43.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
43.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
43.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
43.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
43.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
43.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
42.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
42.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
42.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
42.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
42.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
42.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
42.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
41.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
41.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
41.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
40.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
40.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
40.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
40.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
40.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
40.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
40.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
40.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
40.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
40.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
40.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
40.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
39.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
39.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
39.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
39.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
39.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
39.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
39.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
38.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
38.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
38.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
38.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
38.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
38.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
38.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
38.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
37.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
37.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
37.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
37.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
36.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
36.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
36.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
36.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
36.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
36.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
36.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
36.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
36.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
36.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
35.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
35.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
35.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
35.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
35.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
35.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
34.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
34.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
34.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
34.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
34.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
34.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
34.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
34.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
34.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
34.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
33.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
33.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
33.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
33.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
33.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
33.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
32.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
32.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
32.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
32.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
32.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
32.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
32.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
32.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
31.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
31.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
31.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
31.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
30.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
30.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
30.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
30.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
30.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
30.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
30.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
30.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
30.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
30.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
30.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
30.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
30.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
29.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
29.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
29.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
29.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
29.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
29.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
29.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
28.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
28.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
28.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
28.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
27.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
27.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
26.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
26.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
26.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
25.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
24.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
24.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
23.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
23.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
23.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
22.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
22.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
22.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
22.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
22.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
21.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
21.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
21.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
21.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
20.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
19.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
19.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
18.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
18.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
18.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
17.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
16.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
16.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
15.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
14.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
14.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
0.8
CPT0001340003
Tumor
0.7
CPT0012550003
Tumor
0.6
CPT0017410003
Tumor
0.5
CPT0021240003
Tumor
0.5
CPT0088480003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0012180003
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0075560003
Tumor
0.4
CPT0012670003
Tumor
0.4
CPT0066480003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0000640003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0078660003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0025350003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0088900003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0075720003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0069160003
Tumor
0.2
CPT0085670003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0002350011
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0063320003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0009060003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0012920003
Normal
0.0
CPT0002270011
Tumor
0.0
CPT0009020003
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0077310003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0088570001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0081880003
Tumor
-0.2
CPT0014130001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0007320003
Tumor
-0.2
CPT0069010001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0076330003
Tumor
-0.3
CPT0000890001
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0078510003
Tumor
-0.3
CPT0089480003
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0006950001
Normal
-0.3
CPT0092310003
Normal
-0.4
CPT0088780001
Normal
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
