HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:41.1 nTPM
HPA Brain:113.3 nTPM
GTEx:41.1 nTPM
FANTOM5:231.8 Scaled Tags Per Million
Pig:102.8 nTPM
Mouse:95.6 nTPM
Allen mouse:8.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037580
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 113.3
Sample id Sample description nTPM
Hippocampus
nTPM: 111.4
1855 Male, age 76, left hemisphere 118.9
2621 Female, age 67, right hemisphere 116.5
2148 Female, age 91, left hemisphere 115.7
1898 Male, age 80, left hemisphere 112.2
2529 Female, age 94, left hemisphere 110.8
1911 Female, age 85, right hemisphere 94.0
Dentate gyrus
nTPM: 103.3
2010 Male, age 76, both hemispheres 114.1
2530 Female, age 94, left hemisphere 111.4
2246 Female, age 85, both hemispheres 107.7
2528 Male, age 74, both hemispheres 100.9
1927 Female, age 91, both hemispheres 100.1
2531 Female, age 67, both hemispheres 85.6
Entorhinal gyrus
nTPM: 110.0
1938 Female, age 85, left hemisphere 115.5
2613 Female, age 94, left hemisphere 115.0
2117 Female, age 91, right hemisphere 113.4
2764 Male, age 80, right hemisphere 107.3
1787 Male, age 76, left hemisphere 106.3
2686 Male, age 75, right hemisphere 102.3
Hippocampus, CA1
nTPM: 113.3
2749 Male, age 80, left hemisphere 136.9
1873 Female, age 85, both hemispheres 120.2
2527 Male, age 74, both hemispheres 111.7
2045 Male, age 76, both hemispheres 107.4
2082 Female, age 91, right hemisphere 90.6
Hippocampus, CA2
nTPM: 105.3
1963 Male, age 80, left hemisphere 122.4
1892 Male, age 76, both hemispheres 117.8
2437 Female, age 94, left hemisphere 104.3
2249 Male, age 74, both hemispheres 99.9
2113 Female, age 91, right hemisphere 97.5
1940 Female, age 85, left hemisphere 90.1
Hippocampus, CA3
nTPM: 100.5
2137 Male, age 80, left hemisphere 111.4
2861 Female, age 67, both hemispheres 108.7
1867 Male, age 76, both hemispheres 105.3
2620 Female, age 94, left hemisphere 99.5
1891 Female, age 85, both hemispheres 95.4
2436 Male, age 74, both hemispheres 83.0
Parahippocampal cortex
nTPM: 108.8
2622 Female, age 67, right hemisphere 123.8
2692 Male, age 74, both hemispheres 118.1
2245 Female, age 91, both hemispheres 111.6
1933 Female, age 85, both hemispheres 111.5
2250 Female, age 67, right hemisphere 111.3
2693 Female, age 94, both hemispheres 105.5
1850 Male, age 80, both hemispheres 104.5
2532 Female, age 72, left hemisphere 104.4
2018 Male, age 76, both hemispheres 99.5
1990 Female, age 91, right hemisphere 97.9
Perirhinal gyrus
nTPM: 106.5
1847 Female, age 91, left hemisphere 114.5
2521 Female, age 94, right hemisphere 109.7
1841 Female, age 85, right hemisphere 105.4
1794 Male, age 80, right hemisphere 104.1
2848 Male, age 76, right hemisphere 98.7
Subiculum
nTPM: 103.3
2619 Male, age 74, both hemispheres 114.2
2438 Female, age 94, left hemisphere 106.3
2042 Male, age 76, both hemispheres 102.5
1977 Female, age 85, both hemispheres 99.9
2729 Female, age 91, right hemisphere 98.7
1901 Male, age 80, both hemispheres 98.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 41.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.1
Samples: 197

Max nTPM: 59.9
Min nTPM: 14.1
Std nTPM: 6.7
Median nTPM: 41.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 59.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 58.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 57.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 54.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 53.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 53.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 53.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 52.5
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 52.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 52.4
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 52.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 231.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 231.8
FF:10153-102I9 76 years, female 282.0
FF:10169-103B7 60 years, female 181.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 102.8
Pig sample Sample description nTPM
Subiculum
nTPM: 97.1
Samples: 4

Max nTPM: 107.5
Min nTPM: 91.4
Sample A Female 107.5
Sample B Female 97.9
Sample C Male 91.4
Sample D Male 91.6
Dorsal hippocampus
nTPM: 99.2
Samples: 4

Max nTPM: 110.4
Min nTPM: 88.3
Sample A Female 106.4
Sample B Female 91.8
Sample C Male 110.4
Sample D Male 88.3
Entorhinal cortex
nTPM: 102.9
Samples: 4

Max nTPM: 105.4
Min nTPM: 101.5
Sample A Female 101.7
Sample B Female 105.4
Sample C Male 102.8
Sample D Male 101.5
Ventral hippocampus
nTPM: 96.7
Samples: 4

Max nTPM: 122.2
Min nTPM: 76.3
Sample A Female 87.3
Sample B Female 76.3
Sample C Male 122.2
Sample D Male 100.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 95.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 87.8
Samples: 4

Max nTPM: 90.7
Min nTPM: 84.8
Sample A Male 89.2
Sample B Male 86.5
Sample C Female 84.8
Sample D Female 90.7
Hippocampal formation
nTPM: 95.7
Samples: 4

Max nTPM: 112.9
Min nTPM: 85.7
Sample A Male 85.7
Sample B Male 98.1
Sample C Female 112.9
Sample D Female 85.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.4
69527980 Antisense, RP_050421_02_H03, Mouse strain C57BL/6J (56 days, male) 8.4

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