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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBC1D22A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
29.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
28.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
27.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
24.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
24.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
23.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
23.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
23.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
23.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
21.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
19.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
18.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
18.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
17.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
17.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
17.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
17.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
16.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
16.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
15.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
15.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
15.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
14.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
14.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
14.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
14.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
14.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
14.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
14.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
13.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
13.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
13.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
13.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
13.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
12.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
12.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
12.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
11.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
11.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
11.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
11.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
11.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
11.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
11.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
10.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
10.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
10.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
10.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
8.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
8.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
7.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
7.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
6.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
5.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
5.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBC1D22A is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
44.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
35.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
29.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
28.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
28.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
24.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
24.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
24.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
24.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
23.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
23.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
23.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
23.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
23.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
22.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
22.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
22.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
22.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
22.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
22.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
22.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
22.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
21.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
21.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
21.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
21.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
21.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
21.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
21.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
21.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
21.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
21.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
20.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
20.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
20.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
20.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
20.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
20.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
20.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
20.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
20.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
20.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
19.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
19.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
19.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
19.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
19.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
19.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
19.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
19.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
19.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
19.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
19.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
19.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
19.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
19.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
19.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
19.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
19.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
19.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
19.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
19.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
19.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
19.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
19.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
19.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
18.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
18.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
18.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
18.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
18.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
18.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
18.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
18.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
18.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
18.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
18.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
18.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
18.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
18.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
18.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
18.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
18.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
18.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
18.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
18.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
18.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
18.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
18.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
18.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
18.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
18.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
18.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
18.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
17.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
17.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
17.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
17.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
17.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
17.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
17.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
17.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
17.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
17.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
17.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
17.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
17.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
17.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
17.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
17.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
17.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
17.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
17.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
17.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
17.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
17.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
17.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
17.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
17.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
17.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
17.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
17.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
17.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
17.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
17.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
17.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
17.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
17.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
17.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
17.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
16.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
16.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
16.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
16.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
16.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
16.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
16.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
16.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
16.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
16.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
16.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
16.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
16.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
16.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
16.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
16.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
16.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
16.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
16.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
16.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
16.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
16.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
16.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
16.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
16.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
16.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
16.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
16.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
16.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
15.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
15.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
15.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
15.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
15.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
15.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
15.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
15.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
15.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
15.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
15.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
15.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
15.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
15.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
15.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
15.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
15.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
15.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
15.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
15.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
15.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
15.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
15.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
15.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
15.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
15.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
15.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
15.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
15.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
15.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
15.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
15.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
15.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
15.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
15.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
15.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
15.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
15.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
15.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
15.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
15.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
15.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
15.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
15.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
15.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
15.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
15.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
15.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
15.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
15.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
15.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
15.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
15.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
15.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
15.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
14.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
14.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
14.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
14.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
14.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
14.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
14.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
14.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
14.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
14.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
14.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
14.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
14.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
14.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
14.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
14.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
14.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
14.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
14.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
14.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
14.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
14.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
14.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
14.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
14.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
14.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
14.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
14.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
14.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
14.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
14.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
14.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
14.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
14.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
14.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
14.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
14.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
14.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
14.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
14.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
13.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
13.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
13.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
13.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
13.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
13.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
13.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
13.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
13.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
13.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
13.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
13.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
13.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
13.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
13.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
13.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
13.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
13.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
13.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
13.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
13.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
13.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
13.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
13.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
13.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
13.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
13.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
13.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
13.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
13.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
13.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
13.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
13.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
13.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
13.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
13.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
13.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
13.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
13.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
13.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
13.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
13.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
13.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
12.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
12.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
12.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
12.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
12.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
12.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
12.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
12.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
12.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
12.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
12.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
12.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
12.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
12.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
12.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
12.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
12.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
12.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
12.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
12.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
12.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
12.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
12.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
12.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
12.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
12.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
12.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
12.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
12.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
12.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
12.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
12.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
12.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
12.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
12.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
12.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
11.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
11.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
11.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
11.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
11.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
11.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
11.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
11.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
11.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
11.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
11.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
11.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
11.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
11.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
11.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
11.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
11.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
11.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
11.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
11.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
11.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
11.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
11.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
11.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
10.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
10.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
10.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
10.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
10.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
10.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
10.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
10.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
10.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
10.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
10.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
10.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
10.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
10.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
10.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
10.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
10.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
10.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
10.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
9.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
9.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
9.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
9.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
9.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
9.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
9.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
9.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
9.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
9.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
9.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
8.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
8.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
8.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
8.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
8.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
8.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
7.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
7.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
7.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
7.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
7.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
7.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
7.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
6.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
6.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
5.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
3.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBC1D22A is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
29.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
24.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
24.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
24.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
24.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
23.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
23.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
23.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
23.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
23.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
23.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
23.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
22.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
22.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
22.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
21.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
21.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
21.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
21.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
20.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
20.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
20.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
20.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
20.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
20.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
20.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
19.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
19.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
19.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
19.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
18.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
18.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
18.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
18.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
18.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
18.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
17.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
17.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
17.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
17.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
17.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
17.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
16.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
16.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
16.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
16.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
16.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
16.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
16.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
16.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
16.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
16.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
16.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
15.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
15.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
15.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
15.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
15.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
15.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
15.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
15.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
15.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
15.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
14.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
14.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
14.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
14.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
14.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
14.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
14.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
14.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
14.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
13.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
13.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
13.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
13.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
12.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
12.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
12.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
11.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
11.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
10.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
10.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
10.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBC1D22A is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
41.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
39.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
35.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
34.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
28.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
27.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
26.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
26.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
26.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
25.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
25.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
25.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
24.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
23.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
23.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
23.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
23.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
22.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
22.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
22.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
22.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
22.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
22.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
22.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
22.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
22.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
21.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
21.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
20.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
20.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
20.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
20.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
20.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
20.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
20.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
20.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
20.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
20.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
20.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
20.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
20.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
19.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
19.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
19.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
19.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
19.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
19.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
19.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
19.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
19.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
18.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
18.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
18.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
18.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
18.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
18.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
18.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
18.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
18.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
18.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
17.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
17.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
17.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
17.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
17.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
17.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
17.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
17.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
17.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
17.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
17.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
17.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
17.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
17.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
17.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
17.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
17.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
17.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
17.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
17.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
17.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
17.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
17.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
16.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
16.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
16.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
16.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
16.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
16.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
16.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
16.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
16.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
16.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
16.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
16.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
16.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
16.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
16.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
16.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
16.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
16.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
16.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
16.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
16.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
16.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
16.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
16.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
16.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
16.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
16.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
16.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
15.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
15.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
15.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
15.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
15.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
15.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
15.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
15.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
15.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
15.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
15.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
15.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
15.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
15.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
15.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
14.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
14.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
14.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
14.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
14.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
14.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
14.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
14.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
14.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
14.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
14.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
14.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
14.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
14.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
14.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
14.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
14.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
14.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
13.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
13.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
13.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
13.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
13.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
13.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
13.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
13.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
13.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
13.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
13.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
13.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
13.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
13.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
12.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
12.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
12.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
12.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
12.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
12.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
12.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
12.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
12.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
12.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
12.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
12.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
11.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
11.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
11.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
11.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
11.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
11.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
11.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
11.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
11.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
11.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
11.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
11.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
10.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
10.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
10.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
10.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
10.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
10.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
10.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
10.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
10.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
10.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
10.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
10.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
10.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
9.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
9.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
9.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
9.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
9.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
9.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
9.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
9.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
9.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
9.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
9.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
9.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
9.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
8.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
8.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
8.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
8.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
7.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
7.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
7.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
7.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
7.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
7.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
7.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
6.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
6.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
6.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
6.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
6.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
6.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
6.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
5.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
4.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
3.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
0.9
CPT0001180009
Tumor
0.9
CPT0078800003
Tumor
0.7
CPT0084560003
Tumor
0.7
CPT0012550003
Tumor
0.6
CPT0014160003
Tumor
0.5
CPT0021240003
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0023350003
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0001340003
Tumor
0.4
CPT0092290003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0000640003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0025290003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0015810003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0009080003
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0077140001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0084590001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0086970003
Normal
0.0
CPT0079430001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0069010001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0025880003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0075130003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0017850003
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0012180003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0088690003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0010160003
Tumor
-0.2
CPT0018250001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0077490003
Tumor
-0.2
CPT0012090003
Normal
-0.2
CPT0025350003
Tumor
-0.2
CPT0086890003
Normal
-0.2
CPT0089460004
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
